Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F02f
         (344 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U90878-1|AAC05580.1|  329|Homo sapiens carboxyl terminal LIM dom...    28   6.8  
BC150284-1|AAI50285.1| 1766|Homo sapiens ZNF294 protein protein.       28   6.8  
BC018755-1|AAH18755.1|  329|Homo sapiens PDZ and LIM domain 1 (e...    28   6.8  
BC000915-1|AAH00915.1|  329|Homo sapiens PDZ and LIM domain 1 (e...    28   6.8  
AY923052-1|AAW82438.1|  329|Homo sapiens PDZ and LIM domain 1 (e...    28   6.8  
AL163248-2|CAB90429.3| 1574|Homo sapiens containing human KIAA07...    28   6.8  
AL160288-1|CAH70720.1|  329|Homo sapiens PDZ and LIM domain 1 (e...    28   6.8  
AL157834-1|CAH72341.1|  329|Homo sapiens PDZ and LIM domain 1 (e...    28   6.8  
AJ310549-1|CAC32846.1|  329|Homo sapiens CLP-36 protein protein.       28   6.8  
AB018257-1|BAA34434.2| 1780|Homo sapiens KIAA0714 protein protein.     28   6.8  

>U90878-1|AAC05580.1|  329|Homo sapiens carboxyl terminal LIM domain
           protein protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>BC150284-1|AAI50285.1| 1766|Homo sapiens ZNF294 protein protein.
          Length = 1766

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 319  TGLPELLRTLLSNFIPVLLF 260
            T LPE L+TLL+   P+LLF
Sbjct: 1373 TNLPEYLQTLLNTLAPLLLF 1392


>BC018755-1|AAH18755.1|  329|Homo sapiens PDZ and LIM domain 1
           (elfin) protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>BC000915-1|AAH00915.1|  329|Homo sapiens PDZ and LIM domain 1
           (elfin) protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>AY923052-1|AAW82438.1|  329|Homo sapiens PDZ and LIM domain 1
           (elfin) protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>AL163248-2|CAB90429.3| 1574|Homo sapiens containing human KIAA0714
            protein protein.
          Length = 1574

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 319  TGLPELLRTLLSNFIPVLLF 260
            T LPE L+TLL+   P+LLF
Sbjct: 1181 TNLPEYLQTLLNTLAPLLLF 1200


>AL160288-1|CAH70720.1|  329|Homo sapiens PDZ and LIM domain 1
           (elfin) protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>AL157834-1|CAH72341.1|  329|Homo sapiens PDZ and LIM domain 1
           (elfin) protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>AJ310549-1|CAC32846.1|  329|Homo sapiens CLP-36 protein protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 165 CFVPMCVKASTNLIKTGXEFKEIRISCSKHQKNNKT 272
           C+V  C    TNL + G  F E +I C KH +   T
Sbjct: 283 CYV--CTDCGTNLKQKGHFFVEDQIYCEKHARERVT 316


>AB018257-1|BAA34434.2| 1780|Homo sapiens KIAA0714 protein protein.
          Length = 1780

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 319  TGLPELLRTLLSNFIPVLLF 260
            T LPE L+TLL+   P+LLF
Sbjct: 1387 TNLPEYLQTLLNTLAPLLLF 1406


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,201,449
Number of Sequences: 237096
Number of extensions: 659150
Number of successful extensions: 1040
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)