Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309F01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 27 1.7
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 26 3.0
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 26 3.9
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 25 5.2
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 25 5.2
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 25 6.8
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 25 9.0
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 25 9.0
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 9.0
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 9.0
SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces po... 25 9.0
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 258 SPLSASISQANSPPSLLFLTYFPFSITDLASS 163
+P+ +S+SQAN+P + L P S+ +L S+
Sbjct: 515 NPIVSSVSQANAPKNALHSMPSPTSLANLPSN 546
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 26.2 bits (55), Expect = 3.0
Identities = 8/37 (21%), Positives = 19/37 (51%)
Frame = +2
Query: 89 WQYFYDKVAQAPYVWNPTTGDLVTYDDARSVIEKGKY 199
W Y ++ ++ P +W+ + D + D + V+ +Y
Sbjct: 145 WGYKFEAISTLPEIWDACSRDQIEQRDNQDVVPDEQY 181
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 68 NGITSGTWQYFYDKVAQAPYVWNPTTGDLVTYDDARSVIEKGKYVRN 208
NGI Q +A AP+ TG + T +D + I+ ++RN
Sbjct: 186 NGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDLKDFIKAFPFLRN 232
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 282 PIFIAFRISPLSASISQANSPPSL 211
P F A + PL + +SQ+N PP L
Sbjct: 266 PSFAAPQAHPLPSHLSQSNVPPQL 289
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 288 PKPIFIAFRISPLSASISQANSPPSLLFLTYFPFSIT 178
PKP+F A ++ PL+ + P T FP++ T
Sbjct: 170 PKPLFSALQVYPLATIFNCVAGLPQGFESTVFPWNKT 206
>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 228 NSPPSLLFLTYFPFSITDLASS*VTRSPVVGFHTYG 121
N+PP F YFP + ++ + G+H +G
Sbjct: 87 NAPPYRWFCHYFPIRLHKTTELDSEKNYIFGYHPHG 122
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/51 (17%), Positives = 28/51 (54%)
Frame = +2
Query: 35 QDGVVDYREIVNGITSGTWQYFYDKVAQAPYVWNPTTGDLVTYDDARSVIE 187
++G +D++E + ++ + DK+ A +++ L++YD+ +++
Sbjct: 76 KNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 373 CEMMKITK--FFDSDQLFESKSDKLTLSGIS*AHIHSVQDIAIVSVYFP 233
CE K+T +F +++E K ++T S A + +QD +S+ FP
Sbjct: 696 CETGKVTPQIYFAPQEVWEIKGAQITSSPAYKAALGLIQDDRGLSIRFP 744
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 297 AEFPKPIFIAFRISPLSASISQANSPPSLLFLTYFP 190
A P+ F+ F S S+S A LFL Y P
Sbjct: 262 ASLPQSSFLNFNSSGKRVSVSAAAQQHKNLFLPYLP 297
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 17 PVKGTWQDGVVDYREIVNGITSG 85
P + +W D VDYRE + ++ G
Sbjct: 1527 PHQFSWTDFFVDYREFIRWLSRG 1549
>SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 622
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 70 IHDLPIVHHTVLPSSFNWTI 11
IH + +VH + LPS +W +
Sbjct: 385 IHPVQMVHRSALPSQDHWKV 404
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,994,441
Number of Sequences: 5004
Number of extensions: 39595
Number of successful extensions: 98
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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