Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       48   3e-07
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.5  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   1.5  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   2.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.2  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   6.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.2  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 47.6 bits (108), Expect = 3e-07
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   VANGPV-KGTWQDGVVDYREIVNGITSGTWQYFYDKVAQAPYVWNPTTGDLVTYDDARSV 181
           V  G V + T + GV+ Y E    + +  W   + +  Q PY         V YDD RSV
Sbjct: 298 VGGGTVGRYTREPGVMGYNEFCEKLATEAWDLRWSEEQQVPYAVR--NNQWVGYDDLRSV 355

Query: 182 IEKGKYVRNNKLGGLFAWEIDADN 253
             K KY+ +  LGG   W ++ D+
Sbjct: 356 QLKVKYLLDQGLGGAMVWSLETDD 379


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 46  HTVLPSSFNWTISNS 2
           H++ P SFN+T+SNS
Sbjct: 751 HSLSPISFNYTLSNS 765


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 134 NPTTGDLVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 253
           N   G  ++Y+D  S   K  YV+   LGG+   ++  D+
Sbjct: 388 NDEHGIWLSYEDPESAGNKAAYVKAKGLGGISINDLGLDD 427


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 134 NPTTGDLVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 253
           N   G  V+Y+D  +   K  YV+   LGG+   ++  D+
Sbjct: 380 NGEHGVWVSYEDPDTAGNKAGYVKAKNLGGIAINDLSYDD 419


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 96  YCHVPEVMPFT 64
           YC+VPEV+P T
Sbjct: 830 YCNVPEVVPET 840


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 277 YGLRKFRLGLACLIWIRITDRNQKTL 354
           +GL  F LG+  ++W +  D+N++ +
Sbjct: 407 HGLILFLLGMWMVLWEKTLDKNKEEI 432


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 83   GTWQYFYDK 109
            G WQY YDK
Sbjct: 1935 GIWQYLYDK 1943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,442
Number of Sequences: 2352
Number of extensions: 8955
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)