Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 249  VVAAPLEQVVDVIVVCLQR 193
            VVAA L  +V +IV+C+ R
Sbjct: 1614 VVAAVLVIIVAIIVICVLR 1632


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 455 SNCSTRTRAWRA*TCGTC 508
           +NC+  TR W     G C
Sbjct: 526 ANCTASTRCWEVFMDGIC 543



 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 DIVLDCLCGEECN 324
           ++ +D +C E+CN
Sbjct: 536 EVFMDGICNEDCN 548


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 172  CSKSKHEALKTNNNNI 219
            C   KH  LKT NN +
Sbjct: 2672 CGCGKHPLLKTLNNEL 2687


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 304 LCGEECNRGYSLL 342
           LC E CN G ++L
Sbjct: 278 LCDEICNEGQTIL 290


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 16  ITTNYVVAYLLLFEMANLTPGKSLLV 93
           I T Y +  LL+F   + TP  ++ V
Sbjct: 243 IYTTYTIFLLLIFGSGSATPENNVSV 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 304 LCGEECNRGYSLL 342
           LC E CN G ++L
Sbjct: 278 LCDEICNEGQTIL 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,998
Number of Sequences: 336
Number of extensions: 2500
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)