Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309E12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 34 0.080
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 33 0.18
06_01_0175 - 1371089-1371706,1371812-1371994,1372069-1372324,137... 31 0.56
04_04_1043 - 30352002-30352005,30352088-30352522,30353934-303543... 31 0.56
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366... 30 1.3
10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865... 30 1.3
02_05_0426 - 28881671-28881753,28882130-28882621,28882802-288828... 29 1.7
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 29 1.7
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663... 29 2.3
10_01_0088 + 1087807-1088282,1088752-1088974 29 2.3
03_05_0072 - 20495568-20495635,20495713-20495839,20496119-204963... 28 4.0
06_03_1028 - 27004229-27004566,27005554-27005772,27006254-270063... 28 5.2
05_04_0365 + 20659846-20660301 28 5.2
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 28 5.2
12_01_0178 + 1316730-1316949,1317781-1318655 27 6.9
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 27 6.9
08_02_0182 - 13930436-13931245,13931348-13931627,13931788-139323... 27 6.9
07_03_0755 - 21261855-21261945,21262277-21262323,21262819-212630... 27 6.9
07_01_0813 - 6405897-6405961,6406328-6406901 27 6.9
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 27 6.9
02_04_0042 + 19182251-19182562,19182626-19182853 27 6.9
11_01_0614 + 4911167-4911830,4911944-4911984 27 9.1
06_01_0173 - 1364219-1364836,1364941-1365123,1365215-1365470,136... 27 9.1
03_05_0366 - 23505755-23506441 27 9.1
02_02_0341 + 9141556-9142654,9143357-9143454 27 9.1
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 33.9 bits (74), Expect = 0.080
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = +1
Query: 31 VVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCSKSKHEALKTNN 210
+ AY FE+ G+++ V + K V S K LKT
Sbjct: 154 LTAYAAFFEVGKPKKGETVFVSAASGAVGQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKF 213
Query: 211 NNID--HLLERGSDYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILYG 372
D + + +D T +R+ PDG+DI D + G + ++ GR ++ G
Sbjct: 214 GFHDAFNYKKESNDLTGALRRCFPDGIDIYFDNVGGATLDAALVNMRRGGRVVVCG 269
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 AITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCSKSKHE 192
A+ T+ + AY L+E+ G+ + V + K V + +K +
Sbjct: 134 ALGTSGMTAYAGLYEVGRPEAGEKVFVSAASGSVGSLVGQFAKLAGCYVVGCAGTNAKVD 193
Query: 193 ALKTNNNNIDHLLERGS-DYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILY 369
LK D + D S +++ PDG+DI D + GE + + GR L
Sbjct: 194 LLKNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIYFDNVGGETLEAALANMNTYGRVALC 253
Query: 370 G 372
G
Sbjct: 254 G 254
>06_01_0175 -
1371089-1371706,1371812-1371994,1372069-1372324,
1372407-1372976,1373423-1373529,1373664-1374136,
1374279-1374372
Length = 766
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 495 VQARQALVLVEQFDRRHLVHLPPRTGSAEEALCLAGHDVR*SIEDVTAHWLQKRIPAV 322
+ +QAL +E F H + +PPRT + + G + + TA WL + IP +
Sbjct: 532 ISMKQALAFLEDFKLGHYMKIPPRTMFMAQ---VVGTSIAAFVYIGTAWWLMETIPNI 586
>04_04_1043 -
30352002-30352005,30352088-30352522,30353934-30354351,
30355173-30355419
Length = 367
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 244 RCPSRAGGRCYCCLSSAPRACFWSRHQTRSRFRPSSPTGLQLV-PH 110
RC G + C +AP + + RH R R R P QLV PH
Sbjct: 99 RCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVAPH 144
>12_02_1058 -
25735902-25736000,25736085-25736152,25736575-25736638,
25736838-25736919,25737503-25737561,25737664-25737723,
25737884-25738046,25738236-25738360,25738827-25738859,
25739098-25739160,25739364-25739423,25739972-25740196,
25740272-25740433
Length = 420
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 364 LYGSSNIVTGETKSFFSAARAWW 432
+Y IV + K FSAAR WW
Sbjct: 201 IYNKDGIVVYDGKGLFSAARVWW 223
>10_07_0124 -
13085820-13085997,13086235-13086362,13086475-13086550,
13086726-13086803,13086985-13087064,13087411-13087480,
13087730-13087887,13088225-13088315,13088379-13088455,
13088612-13088686,13088798-13089071,13089911-13090041,
13090154-13090323,13090413-13090971,13091077-13091127
Length = 731
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 280 GVDIVLDCLCGEECNRGYSL 339
G+D + DC CG+E RG SL
Sbjct: 134 GIDPIFDCSCGQEVLRGISL 153
>02_05_0426 -
28881671-28881753,28882130-28882621,28882802-28882864,
28883251-28883440,28883534-28883642,28883952-28884363,
28884967-28885196,28885294-28885403
Length = 562
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 244 RCPSRAGGRCYCCLSSAPRACFWSRHQTRSRFRPSSPTGLQLV 116
RC G + C +AP + + RH R R R P QLV
Sbjct: 130 RCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQLV 172
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = -2
Query: 367 RGCNGPLASEA-NTRGCTPLRRDNPAQC--LRHPELPS*LRWCSR--CPSRAGG--RCYC 209
+G P+A E T+ P+ +D+P L LPS +R + S G RC+
Sbjct: 192 QGLKVPIAGETLATKTVEPITKDDPISLRYLNSNFLPSCVRCLDKGHIASNCSGPVRCHS 251
Query: 208 CLSSAPRACFWSRHQTRS 155
CL + +CF + T++
Sbjct: 252 CLEAGHMSCFCATRPTKA 269
>12_02_0871 +
23865343-23866016,23866122-23866170,23866276-23866356,
23866599-23866718,23866957-23867055,23867135-23867194,
23867316-23867410,23867483-23867508,23869212-23869285,
23870194-23870259,23871027-23871099,23871585-23871622,
23873758-23873871,23876079-23876195,23876288-23876368,
23876468-23876536,23876631-23876669,23876809-23876973,
23877380-23877484,23877569-23877637,23877754-23877816,
23877903-23878021,23878124-23878348,23878409-23878610
Length = 940
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -2
Query: 295 AQCLRHPELPS*LRWCSRCPSRAGGRCYCCLSS--APRACFWSRHQTRSRFRP--SSP 134
+QC+R P+ + +R P RA ++ APRA W R + R R R SSP
Sbjct: 45 SQCVRRFGKPAAKKGSARTPRRATPVAAAAAAAYDAPRAPLWDRSEERERIRARLSSP 102
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/70 (32%), Positives = 27/70 (38%)
Frame = +3
Query: 108 RCGTSCSPVGEDGRKRDRVWCLLQKQARGAEDKQQ*HRPPAREGQRLHQRSQEGNSGWRR 287
R G + G DGR+R VW + K A E A R G GWRR
Sbjct: 47 RKGAGLAAAGGDGRRRGGVWAAVVK-AAATEPATSGITGSASAIAGSGARYGRG-GGWRR 104
Query: 288 HCAGLSLRRG 317
C+G RG
Sbjct: 105 GCSGGGRWRG 114
>03_05_0072 -
20495568-20495635,20495713-20495839,20496119-20496395,
20496542-20496597
Length = 175
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 398 QRASSALPVRGGKWTR-CLRSNCSTRTRAWRA*TCGT 505
+R SAL R G T+ C+ + + R RAWR C T
Sbjct: 37 RRTMSALASREGDSTKACMWESKNRRARAWRGQECAT 73
>06_03_1028 -
27004229-27004566,27005554-27005772,27006254-27006390,
27007172-27007509
Length = 343
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 189 VLAFGADTKHGHVFDRLRQLGYSLSHTAPSGMHE*TLAGSQVSHLEEQQI 40
V AFG+ T +FD +Q+ ++ + AP T + S S L+ Q+
Sbjct: 145 VFAFGSGTLPRSLFDDRQQISFAWDNNAPLNHANTTSSSSWTSDLQLSQV 194
>05_04_0365 + 20659846-20660301
Length = 151
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 93 AFRWGRCGTSCSPVGEDGRKRDRVWC 170
AFR G CG +P E+ RK D V C
Sbjct: 126 AFRAGLCGGGPAPPLEEDRKNDPVCC 151
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 190 EALKTNNNNIDHLLERGSDYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILY 369
++L+ + + LLE DY +V T + I CN +S KP GRY ++
Sbjct: 631 DSLEEAKDFVVTLLENLQDYIRDVNLYTDEPHTISAH----SSCNHSFSREKPSGRYAVH 686
Query: 370 GSSNIVTGETKSFFSA 417
+ E+ S +A
Sbjct: 687 AEDMLTPIESFSEITA 702
>12_01_0178 + 1316730-1316949,1317781-1318655
Length = 364
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 327 RVFASEANGPLHPLWII*HRDRRDKELLQRCPCVVASGQG 446
RV A N PL ++ HRD D ++ + CP V QG
Sbjct: 284 RVVAVVENTPLFLIFRAVHRDGSDYDIPKYCPLVFKVDQG 323
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 27.5 bits (58), Expect = 6.9
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 6/140 (4%)
Frame = +1
Query: 55 EMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVT-VFGVCSKSKHEALKTNNNNIDHLL 231
E A + GKS+L+ K V + V S K E LK+ ++
Sbjct: 224 ERAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKVAATASTPKLELLKSLGADV---- 279
Query: 232 ERGSDYTSEVRKVTPDGVDIVLDCL-CGEEC----NRGYSLLKPMGRYILYGSSNIVTGE 396
DYT E + PD D+VLD + GE+ G S++ G + G +VT +
Sbjct: 280 --AIDYTKENFEDLPDKYDVVLDAVGQGEKAVKVVKEGGSVVVLTGAVVPPGFRFVVTSD 337
Query: 397 TKSFFSAARAWWQVDKVSPI 456
S + + KV P+
Sbjct: 338 -GSVLEKLNPYLESGKVKPL 356
>08_02_0182 -
13930436-13931245,13931348-13931627,13931788-13932324,
13932482-13932579,13932678-13933118
Length = 721
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 495 VQARQALVLVEQFDRRHLVHLPPRTGSAEEALCLAGHDVR*SIEDVTAHWL 343
+ QAL V F H + +PPR+ + LAG V ++ TA WL
Sbjct: 484 ISMTQALTFVSDFKLGHYMKIPPRSMFMVQ---LAGTVVASTVHFATAWWL 531
>07_03_0755 -
21261855-21261945,21262277-21262323,21262819-21263014,
21263239-21263340,21263602-21263678,21264037-21264236,
21264324-21264681,21265245-21265301,21265434-21266192,
21266287-21266468,21266651-21266813
Length = 743
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 153 RDRVWC--LLQKQARGAEDKQQ*HRPPAREGQRLH 251
R +VWC L + Q RGA R P GQ+LH
Sbjct: 119 RIKVWCVPLAESQFRGAILANYYQRMPGAPGQKLH 153
>07_01_0813 - 6405897-6405961,6406328-6406901
Length = 212
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 138 EDGRKRDRVWCLL---QKQARGAEDKQQ*HRPPAREGQRLHQRSQEGNSGWRRHCAGLSL 308
EDG W +++ RG +Q P R R+Q G +GWRR A +
Sbjct: 36 EDGGAWGWAWAAAHGDRRRRRGRRVMRQRRTAPRRALDN-RGRTQLGTAGWRRAVAEAAW 94
Query: 309 RRGVQP 326
RG+ P
Sbjct: 95 GRGLAP 100
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 EDGRKRDRVWCLLQKQARGAEDKQQ*H---RPPAREGQRLHQRSQEGN 272
E G KR RV Q+ + +++ H R R+ +R HQR QEG+
Sbjct: 64 ERGEKRRRVGHGQQRSHQRDQERSHQHDQERSVERDQERSHQRDQEGS 111
>02_04_0042 + 19182251-19182562,19182626-19182853
Length = 179
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 PDGVDIV-LDCLCGEECNRGYSLLKPMGRYILYGSSNIV 387
P GVD V LC C G SL+ +G + GSS ++
Sbjct: 61 PCGVDAVPAGTLCAVICGGGCSLVAAVGEVVPMGSSGVL 99
>11_01_0614 + 4911167-4911830,4911944-4911984
Length = 234
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 162 HGHVFDRLRQLGYSLSHTAPSG---MHE*TLAGSQVSHL 55
H H+ + L Q G LS+ P+G +H L G++ S +
Sbjct: 188 HDHIAEALHQQGDELSYAGPAGQTALHAAVLRGAEFSFI 226
>06_01_0173 -
1364219-1364836,1364941-1365123,1365215-1365470,
1365551-1366120,1367066-1367178,1367344-1367816,
1367906-1367984
Length = 763
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 495 VQARQALVLVEQFDRRHLVHLPPRTGSAEEALCLAGHDVR*SIEDVTAHWLQKRIPAV 322
+ QAL ++ F H + +PPRT + + G + + TA WL + IP +
Sbjct: 529 ISMSQALTFLQDFKLGHYMKIPPRTMFMAQ---VVGTLIAAFVYIGTAWWLMETIPNI 583
>03_05_0366 - 23505755-23506441
Length = 228
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 249 HQRSQEGNSGWRRH 290
H+R ++G SGW RH
Sbjct: 88 HRRQRQGGSGWERH 101
>02_02_0341 + 9141556-9142654,9143357-9143454
Length = 398
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 279 IRSYLPDFAGVVAAPLEQVVDVIVVCLQRLVLAFGADTKHGHVFDRL 139
+R + PDF GV + + +V L LV G D H H+F +L
Sbjct: 1 MRQFGPDFGGVTKKSFLHLKKIELVGLPELVEWVGGD--HCHMFSKL 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,834,072
Number of Sequences: 37544
Number of extensions: 358407
Number of successful extensions: 1277
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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