Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2737|AAF53544.1|  796|Drosophila melanogaster CG4631-PA...    32   0.54 
AE014134-2452|AAZ66467.1|  395|Drosophila melanogaster CG33681-P...    31   1.3  
AF145643-1|AAD38618.1|  898|Drosophila melanogaster BcDNA.GH0762...    29   5.1  
AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA ...    29   5.1  
AE013599-1413|AAF58560.2|  141|Drosophila melanogaster CG13175-P...    28   6.7  

>AE014134-2737|AAF53544.1|  796|Drosophila melanogaster CG4631-PA
           protein.
          Length = 796

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 22/62 (35%), Positives = 26/62 (41%)
 Frame = +3

Query: 6   CCCHHHELRGGLSAALRDG*LDSRQESTRAFRWGRCGTSCSPVGEDGRKRDRVWCLLQKQ 185
           CCC  H  R    A L       R +S R F  GR   SC   GE  R   R  C++Q  
Sbjct: 4   CCCRSHSDRTNPMACLPQFPRLQRVQSCRPFLEGRKAASCCVSGE-RRWGQRNGCMIQVL 62

Query: 186 AR 191
           A+
Sbjct: 63  AK 64


>AE014134-2452|AAZ66467.1|  395|Drosophila melanogaster CG33681-PA
           protein.
          Length = 395

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 241 CPSRAGGRCYCCLSSAPRACFWSR---HQTRSRFRPSSPTGLQLVPH 110
           CP  + GR + CL   PRA F +R   +Q++  F P  P  LQ+V +
Sbjct: 113 CPVMSAGRQFPCL---PRAAFLARLSTNQSKDVFEPPIPLCLQMVSY 156


>AF145643-1|AAD38618.1|  898|Drosophila melanogaster BcDNA.GH07626
           protein.
          Length = 898

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 7/134 (5%)
 Frame = +1

Query: 4   DAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFG-VCSK 180
           +A  +   Y   Y  L     +  G+ +L+H+                  +TVF  V SK
Sbjct: 31  EASTVPCVYSTVYYALVVRGQMKKGEKILIHAGSGGVGQAAISVA-LAHGLTVFTTVGSK 89

Query: 181 SKHEAL-----KTNNNNIDHLLERGSDYTSEVRKVTPD-GVDIVLDCLCGEECNRGYSLL 342
            K E L     K    NI +   R + +   V + T   GVD+VL+ L  E+       L
Sbjct: 90  EKREFLLKRFPKLQERNIGN--SRDTSFEQLVLRETKGRGVDLVLNSLSEEKLQASIRCL 147

Query: 343 KPMGRYILYGSSNI 384
              GR++  G  ++
Sbjct: 148 GLNGRFLEIGKFDL 161


>AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA
            protein.
          Length = 2438

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 7/134 (5%)
 Frame = +1

Query: 4    DAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFG-VCSK 180
            +A  +   Y   Y  L     +  G+ +L+H+                  +TVF  V SK
Sbjct: 1571 EASTVPCVYSTVYYALVVRGQMKKGEKILIHAGSGGVGQAAISVA-LAHGLTVFTTVGSK 1629

Query: 181  SKHEAL-----KTNNNNIDHLLERGSDYTSEVRKVTPD-GVDIVLDCLCGEECNRGYSLL 342
             K E L     K    NI +   R + +   V + T   GVD+VL+ L  E+       L
Sbjct: 1630 EKREFLLKRFPKLQERNIGN--SRDTSFEQLVLRETKGRGVDLVLNSLSEEKLQASIRCL 1687

Query: 343  KPMGRYILYGSSNI 384
               GR++  G  ++
Sbjct: 1688 GLNGRFLEIGKFDL 1701


>AE013599-1413|AAF58560.2|  141|Drosophila melanogaster CG13175-PA,
           isoform A protein.
          Length = 141

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = -3

Query: 519 VLEQQVPQVQARQALVLVEQFDR-RHLVHLPPRTGSAEEALCLAGHDVR*SIEDVTAHWL 343
           +L Q V Q Q +    +    ++ R L+   PRT   +  +  A  D+R S   + A   
Sbjct: 60  ILGQVVAQQQLKHTDKVRRSLEQLRSLIEEFPRTNDPQADIVGAVQDIRSSHRRLRAQLG 119

Query: 342 QKRIPAVALLSAETIQHNVYA 280
            K+ P  A     +++H  Y+
Sbjct: 120 SKKTPGAAPAETNSVEHKDYS 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,579,585
Number of Sequences: 53049
Number of extensions: 562708
Number of successful extensions: 2168
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)