Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309E11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15164-1|CAA75436.1| 1012|Homo sapiens Cxorf5 (71-7A) protein pr... 31 1.9
M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein. 31 1.9
M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human alpha-L-f... 31 1.9
M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein. 31 1.9
BC099659-1|AAH99659.1| 550|Homo sapiens OFD1 protein protein. 31 1.9
BC099658-1|AAH99658.1| 550|Homo sapiens OFD1 protein protein. 31 1.9
BC096344-1|AAH96344.1| 972|Homo sapiens OFD1 protein protein. 31 1.9
BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,... 31 1.9
AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1, ... 31 1.9
AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase prot... 31 1.9
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 29 9.9
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 29 9.9
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 29 9.9
BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein pr... 29 9.9
BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open readi... 29 9.9
AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open readi... 29 9.9
AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 29 9.9
>Y15164-1|CAA75436.1| 1012|Homo sapiens Cxorf5 (71-7A) protein
protein.
Length = 1012
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 178 PDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRTR 5
P+ H+ R SE + GT EERN + G+ +RLR T S P+ +
Sbjct: 687 PERHIFGEDR-VVSEQPQVGTLEERNDVVEALTGSAASRLRGGTSSRRLSSTPLPKAK 743
>M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein.
Length = 461
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 212 DLVNSYKPDLIWSDGEWECPDTYWNS 237
>M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human
alpha-L-fucosidase, complete cds. ).
Length = 461
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 212 DLVNSYKPDLIWSDGEWECPDTYWNS 237
>M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein.
Length = 353
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 143 DLVNSYKPDLIWSDGEWECPDTYWNS 168
>BC099659-1|AAH99659.1| 550|Homo sapiens OFD1 protein protein.
Length = 550
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 178 PDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRTR 5
P+ H+ R SE + GT EERN + G+ +RLR T S P+ +
Sbjct: 262 PERHIFGEDR-VVSEQPQVGTLEERNDVVEALTGSAASRLRGGTSSRRLSSTPLPKAK 318
>BC099658-1|AAH99658.1| 550|Homo sapiens OFD1 protein protein.
Length = 550
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 178 PDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRTR 5
P+ H+ R SE + GT EERN + G+ +RLR T S P+ +
Sbjct: 262 PERHIFGEDR-VVSEQPQVGTLEERNDVVEALTGSAASRLRGGTSSRRLSSTPLPKAK 318
>BC096344-1|AAH96344.1| 972|Homo sapiens OFD1 protein protein.
Length = 972
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 178 PDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRTR 5
P+ H+ R SE + GT EERN + G+ +RLR T S P+ +
Sbjct: 647 PERHIFGEDR-VVSEQPQVGTLEERNDVVEALTGSAASRLRGGTSSRRLSSTPLPKAK 703
>BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,
tissue protein.
Length = 461
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 212 DLVNSYKPDLIWSDGEWECPDTYWNS 237
>AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1,
tissue protein.
Length = 466
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 217 DLVNSYKPDLIWSDGEWECPDTYWNS 242
>AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ35595 fis, clone SPLEN2008007, highly similar to
TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (EC 3.2.1.51). ).
Length = 444
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 195 DLVNSYKPDLIWSDGEWECPDTYWNS 220
>AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase
protein.
Length = 466
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 99 ELRSSAVPDLLCSDDAWRCTDSTWGS 176
+L +S PDL+ SD W C D+ W S
Sbjct: 217 DLVNSYKPDLIWSDGEWECPDTYWNS 242
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 29.1 bits (62), Expect = 9.9
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = -2
Query: 337 MHRASYPLGHDDFSVSS-TPGLSPVISTIR------QGQAEIVSQGICIS--IGRQIRNI 185
+HR+S+ D S + TP V S+ R Q A+ + + + IS +GR R
Sbjct: 2039 LHRSSWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYAR-- 2096
Query: 184 QPPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTR 62
DP +S +H ++ E ++A TL GNVR R
Sbjct: 2097 ---DPKFVSATKHEIADACDLTIDEMESAASTLLNGNVRPR 2134
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 29.1 bits (62), Expect = 9.9
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = -2
Query: 337 MHRASYPLGHDDFSVSS-TPGLSPVISTIR------QGQAEIVSQGICIS--IGRQIRNI 185
+HR+S+ D S + TP V S+ R Q A+ + + + IS +GR R
Sbjct: 2019 LHRSSWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYAR-- 2076
Query: 184 QPPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTR 62
DP +S +H ++ E ++A TL GNVR R
Sbjct: 2077 ---DPKFVSATKHEIADACDLTIDEMESAASTLLNGNVRPR 2114
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 29.1 bits (62), Expect = 9.9
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = -2
Query: 337 MHRASYPLGHDDFSVSS-TPGLSPVISTIR------QGQAEIVSQGICIS--IGRQIRNI 185
+HR+S+ D S + TP V S+ R Q A+ + + + IS +GR R
Sbjct: 2028 LHRSSWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYAR-- 2085
Query: 184 QPPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTR 62
DP +S +H ++ E ++A TL GNVR R
Sbjct: 2086 ---DPKFVSATKHEIADACDLTIDEMESAASTLLNGNVRPR 2123
>BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 444 YSFTVEVNREHLLSTYFIRKIGTRLRFEHRCI 349
Y F VEV +E +LSTY + + + +++ + C+
Sbjct: 273 YGFKVEVEKESVLSTYTVNDL-SMMKYYYECV 303
>BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 444 YSFTVEVNREHLLSTYFIRKIGTRLRFEHRCI 349
Y F VEV +E +LSTY + + + +++ + C+
Sbjct: 371 YGFKVEVEKESVLSTYTVNDL-SMMKYYYECV 401
>AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 444 YSFTVEVNREHLLSTYFIRKIGTRLRFEHRCI 349
Y F VEV +E +LSTY + + + +++ + C+
Sbjct: 371 YGFKVEVEKESVLSTYTVNDL-SMMKYYYECV 401
>AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ25795 fis, clone TST07031. ).
Length = 277
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 444 YSFTVEVNREHLLSTYFIRKIGTRLRFEHRCI 349
Y F VEV +E +LSTY + + + +++ + C+
Sbjct: 239 YGFKVEVEKESVLSTYTVNDL-SMMKYYYECV 269
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 29.1 bits (62), Expect = 9.9
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = -2
Query: 337 MHRASYPLGHDDFSVSS-TPGLSPVISTIR------QGQAEIVSQGICIS--IGRQIRNI 185
+HR+S+ D S + TP V S+ R Q A+ + + + IS +GR R
Sbjct: 1712 LHRSSWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYAR-- 1769
Query: 184 QPPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTR 62
DP +S +H ++ E ++A TL GNVR R
Sbjct: 1770 ---DPKFVSATKHEIADACDLTIDEMESAASTLLNGNVRPR 1807
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,128,421
Number of Sequences: 237096
Number of extensions: 1364938
Number of successful extensions: 2993
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2993
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -