Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309E11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 33 0.18
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 33 0.18
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 33 0.23
BT004903-1|AAO47881.1| 799|Drosophila melanogaster LD02989p pro... 29 5.1
AE014297-2738|AAF55723.2| 829|Drosophila melanogaster CG12249-P... 29 5.1
AE014297-2737|AAN13815.1| 799|Drosophila melanogaster CG12249-P... 29 5.1
AY047530-1|AAK77262.1| 784|Drosophila melanogaster GH03554p pro... 28 6.7
AL009196-4|CAA15713.1| 283|Drosophila melanogaster EG:25E8.6 pr... 28 6.7
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 28 6.7
AE014297-2286|AAF55372.1| 784|Drosophila melanogaster CG16941-P... 28 6.7
AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA... 28 6.7
AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC... 28 6.7
AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB... 28 6.7
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 28 8.8
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = -3
Query: 204 VGKFEIFXXXXXXXXXXXXXXXPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGR 25
+GKF I ST+DL L N+ +L + M EL SDH PVV++
Sbjct: 187 LGKFSILYPTQPTYIPHNHKAKASTLDLCLT-NIPNQLANPAVMQELSSDHLPVVIKYST 245
Query: 24 PLNREPDT 1
R T
Sbjct: 246 NFMRNVKT 253
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = -3
Query: 204 VGKFEIFXXXXXXXXXXXXXXXPSTIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGR 25
+GKF I ST+DL L N+ +L + M EL SDH PVV++
Sbjct: 135 LGKFSILYPTQPTYIPHNHKAKASTLDLCLT-NIPNQLANPAVMQELSSDHLPVVIKYST 193
Query: 24 PLNREPDT 1
R T
Sbjct: 194 NFMRNVKT 201
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 129 IDLALLRNVTLRLRSIEAMSELDSDHRPVVMQLGR 25
ID A+ +N++ L E + +L SDH PV++ L R
Sbjct: 190 IDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRR 224
>BT004903-1|AAO47881.1| 799|Drosophila melanogaster LD02989p
protein.
Length = 799
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 148 HASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRT 8
++S + R T E N L+ + + R R P H RSP P T
Sbjct: 716 NSSDKCVRQDTTSEINELLSAGKSSPRPAPRTPKAPHTPRSPRTPHT 762
>AE014297-2738|AAF55723.2| 829|Drosophila melanogaster CG12249-PA,
isoform A protein.
Length = 829
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 148 HASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRT 8
++S + R T E N L+ + + R R P H RSP P T
Sbjct: 746 NSSDKCVRQDTTSEINELLSAGKSSPRPAPRTPKAPHTPRSPRTPHT 792
>AE014297-2737|AAN13815.1| 799|Drosophila melanogaster CG12249-PB,
isoform B protein.
Length = 799
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 148 HASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPRT 8
++S + R T E N L+ + + R R P H RSP P T
Sbjct: 716 NSSDKCVRQDTTSEINELLSAGKSSPRPAPRTPKAPHTPRSPRTPHT 762
>AY047530-1|AAK77262.1| 784|Drosophila melanogaster GH03554p
protein.
Length = 784
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/117 (22%), Positives = 39/117 (33%)
Frame = -2
Query: 361 TSVHRSTRMHRASYPLGHDDFSVSSTPGLSPVISTIRQGQAEIVSQGICISIGRQIRNIQ 182
+SV +TR RA+ L + GL P + G + G +
Sbjct: 516 SSVEAATRAARANITLEEQIHQIHKVKGLLPDEEKEKIGPKPV---------GNKATLSA 566
Query: 181 PPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPR 11
PP P S H+S + G + H + + PP H P QP+
Sbjct: 567 PPQPSTKSQHSHSSQSQHHQGGGGGHHGHHNPHHHHPPHQQAPPHQSHHHHPPQQPQ 623
>AL009196-4|CAA15713.1| 283|Drosophila melanogaster EG:25E8.6
protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -2
Query: 205 GRQIRNIQPPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARS 26
GRQ +NI P P S ++ SG +S L N + +P ++++R
Sbjct: 212 GRQEQNILGPSPASSLTANCKRSSNSDSGKPSSNSSFLVAGSENALAKRQPKAAKNSSRR 271
Query: 25 P 23
P
Sbjct: 272 P 272
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 129 IDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 31
ID AL + V +I A+ EL SDH P+V+ L
Sbjct: 188 IDFALTKGVLGIHANISAVVELSSDHLPLVITL 220
>AE014297-2286|AAF55372.1| 784|Drosophila melanogaster CG16941-PA
protein.
Length = 784
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/117 (22%), Positives = 39/117 (33%)
Frame = -2
Query: 361 TSVHRSTRMHRASYPLGHDDFSVSSTPGLSPVISTIRQGQAEIVSQGICISIGRQIRNIQ 182
+SV +TR RA+ L + GL P + G + G +
Sbjct: 516 SSVEAATRAARANITLEEQIHQIHKVKGLLPDEEKEKIGPKPV---------GNKATLSA 566
Query: 181 PPDPHVLSVQRHASSEHNRSGTAEERNSALTLHRGNVRTRLRPPTCRHAARSPTQPR 11
PP P S H+S + G + H + + PP H P QP+
Sbjct: 567 PPQPSTKSQHSHSSQSQHHQGGGGGHHGHHNPHHHHPPHQQAPPHQSHHHHPPQQPQ 623
>AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA,
isoform A protein.
Length = 1542
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 214 ISIGRQIRNIQPPDPHVLSVQRHASSEHNRSGT 116
+S G+QI ++ P+ HV+ + E N SGT
Sbjct: 72 LSNGKQITSVMHPEAHVVDTDIRSQVELNMSGT 104
>AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC,
isoform C protein.
Length = 1546
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 214 ISIGRQIRNIQPPDPHVLSVQRHASSEHNRSGT 116
+S G+QI ++ P+ HV+ + E N SGT
Sbjct: 76 LSNGKQITSVMHPEAHVVDTDIRSQVELNMSGT 108
>AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB,
isoform B protein.
Length = 1629
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 214 ISIGRQIRNIQPPDPHVLSVQRHASSEHNRSGT 116
+S G+QI ++ P+ HV+ + E N SGT
Sbjct: 159 LSNGKQITSVMHPEAHVVDTDIRSQVELNMSGT 191
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 135 STIDLALLRNVTLRLRSIEAMSELDSDHRPVVMQL 31
S ID A+ + L +I +LDSDH P+++ +
Sbjct: 187 SCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISI 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,678,614
Number of Sequences: 53049
Number of extensions: 435903
Number of successful extensions: 1339
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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