Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309E10f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 254 9e-67
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 244 1e-63
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 180 5e-57
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 207 1e-52
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 171 1e-41
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 166 3e-40
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 155 8e-37
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 151 9e-36
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 135 5e-31
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 128 1e-28
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 113 3e-24
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 101 1e-20
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 79 8e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 2e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 74 2e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 7e-11
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 68 1e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 5e-08
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 58 9e-08
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 7e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 3e-06
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 45 0.001
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 43 0.004
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.006
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.32
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.74
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 1.3
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 9.2
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 254 bits (622), Expect = 9e-67
Identities = 120/166 (72%), Positives = 131/166 (78%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTP YRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 383 XXXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
+E+NVEPVD GPGAFRC+LDVGLARTTTG RVFGAM G
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGA-RVFGAMKG 165
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 244 bits (597), Expect = 1e-63
Identities = 114/166 (68%), Positives = 128/166 (77%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTP YR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 383 XXXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+ G
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN-KVFGALKG 165
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 180 bits (439), Expect(2) = 5e-57
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTP YRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 289
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 63.3 bits (147), Expect(2) = 5e-57
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +2
Query: 404 DEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
DEYNVE V+ GPGAFRCYLDVGL RTTTG VF AM G
Sbjct: 97 DEYNVESVENGPGAFRCYLDVGLNRTTTGAC-VFAAMKG 134
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 207 bits (506), Expect = 1e-52
Identities = 101/166 (60%), Positives = 118/166 (71%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTP YRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 383 XXXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
++YNVE + F+ LD+GLARTTTG ++F M G
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS-KIFAVMKG 164
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 171 bits (415), Expect = 1e-41
Identities = 83/163 (50%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Frame = +2
Query: 38 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQ 211
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+P YR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 212 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 391
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 392 XXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
++Y+VE D F+C+LD GL RT+TG RVF A+ G
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGA-RVFAALKG 174
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 166 bits (403), Expect = 3e-40
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 6/172 (3%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +P YRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 383 XXXXXXXDEYNVEPVDXGPG------AFRCYLDVGLARTTTGGXRVFGAMXG 520
V G F+ LDVGLARTTTG RVFG + G
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGA-RVFGVLKG 194
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 155 bits (375), Expect = 8e-37
Identities = 83/169 (49%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 383 XXXXXXXD---EYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
+ E + + + +LDVG+ RTTTG RVF A+ G
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGN-RVFAALKG 168
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 151 bits (366), Expect = 9e-36
Identities = 80/166 (48%), Positives = 102/166 (61%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+P YR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 203 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 382
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 383 XXXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
+ N++ P F LD+GL R+T G RVF A+ G
Sbjct: 121 GNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGN-RVFAALKG 160
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 135 bits (327), Expect = 5e-31
Identities = 72/162 (44%), Positives = 93/162 (57%)
Frame = +2
Query: 35 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQV 214
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY YRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 215 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 394
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 395 XXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
+EY + + P F+ LDVGLARTTTG +VF M G
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGA-KVFAVMKG 159
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 128 bits (308), Expect = 1e-28
Identities = 62/149 (41%), Positives = 86/149 (57%)
Frame = +2
Query: 74 VKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 253
++ K+ +G TDYYARKRL++QDK+KYNTP YRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 254 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDX 433
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 434 GPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
F+ LD GL RTTTG RVFG + G
Sbjct: 427 EKKPFKAILDAGLVRTTTGN-RVFGVLKG 454
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 115
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 113 bits (271), Expect = 3e-24
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 50 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRI 229
+ Y K +QVK +RRREGKTDY R ++ QD N + +RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 230 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDE 409
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 410 YNV-EPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
Y+V + +D A R +LD+GLAR+T G RVFGA+ G
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGA-RVFGALKG 158
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 101 bits (241), Expect = 1e-20
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTP YR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 203 TCQVAYSRIEGD 238
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 78.6 bits (185), Expect = 8e-14
Identities = 46/112 (41%), Positives = 57/112 (50%)
Frame = +2
Query: 185 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 364
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 365 XXXXXXXXXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
+ Y+VE + F+ LDVG+ TTG RVFGA+ G
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGN-RVFGALKG 114
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 173 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 328
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%)
Frame = +2
Query: 47 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSR 226
N Y R+++K +RRR GKTDY R +L+ QDK K+ R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 227 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 328
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 68.9 bits (161), Expect = 7e-11
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +2
Query: 65 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHI 244
RY+V +RRREGKT+YY R RLV K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKP-------RMAVRISNEYLWVQFLEARIEGDRV 58
Query: 245 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 328
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = +2
Query: 65 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHI 244
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 245 VCAAYSHELPRYGVKVGLTNYAAAYSTG 328
+ AAYS EL YG + + AAY TG
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 5e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 65 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHI 244
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 245 VCAAYSHELPRYGVKVGLTNYAAAYSTG 328
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.4 bits (135), Expect = 9e-08
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +2
Query: 65 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHI 244
RY+V +RRRE +TDY+ R RL+ K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKP-------RLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 245 VCAAYSHELPRYGVKVGLTNYAAAYSTG 328
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 55.6 bits (128), Expect = 7e-07
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = +2
Query: 71 QVKFKRRREGKTDYYARKRLVVQDKNKYNTP 163
+++F+R +EGKTDYYARKRL +QDKN+YNTP
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTP 66
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +2
Query: 68 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHIV 247
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 248 CAAYSHELPRYGVKVGLTNYAAAYSTG 328
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPXYRLIVRLSNK 196
M + K++KN YF ++ VK +R R+ T Y R + NK + +R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 197 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 328
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 43.2 bits (97), Expect = 0.004
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 62 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDH 241
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 242 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 328
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect = 0.006
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 80 FKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 256
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 257 YSHELPRYGVKVGLTNYAAAYSTG 328
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.32
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 83 KRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 262
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 263 HELPR 277
L +
Sbjct: 61 KTLKK 65
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect = 0.74
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +2
Query: 83 KRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 262
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 263 HELPRYGVKVGLTNYAAAYSTG 328
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 23 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 203 TCQVA 217
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 35 KVVKNKQYFKRYQVKFKRRREG-KTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDV 202
+++K + F+ ++ +KR+RE K+ Y + V+++ NKYN + I L++KD+
Sbjct: 1107 ELLKKNRSFENHEQIYKRQREKLKSHYKSSMSKVIENSNKYNN-LIKDIEALNSKDI 1162
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 323 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 210
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +2
Query: 71 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVTCQVAYSRIEGDHIVC 250
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 251 AAYSHELPRYGVKVGLTNYA 310
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,208,329
Number of Sequences: 1657284
Number of extensions: 8527978
Number of successful extensions: 20426
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20395
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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