Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   177   6e-45
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   174   3e-44
02_04_0381 - 22497519-22497769,22498157-22498247                       27   6.9  
06_03_0957 + 26307062-26308987                                         27   9.1  

>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  177 bits (430), Expect = 6e-45
 Identities = 92/165 (55%), Positives = 106/165 (64%)
 Frame = +2

Query: 26  GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVT 205
           GFVK  K   YFKR+QVKFKRRR+GKTDY AR RL  QDKNKYNTP YR +   +NKD+T
Sbjct: 3   GFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDIT 59

Query: 206 CQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXX 385
            Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG                   
Sbjct: 60  AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEG 119

Query: 386 XXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
                 ++Y VEP D     FR  LDVGL RTTTG  RVFGA+ G
Sbjct: 120 NVEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGN-RVFGALKG 162


>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  174 bits (424), Expect = 3e-44
 Identities = 91/165 (55%), Positives = 105/165 (63%)
 Frame = +2

Query: 26  GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPXYRLIVRLSNKDVT 205
           GFVK  K   Y KR+QVKFKRRR+GKTDY AR RL  QDKNKYNTP YR +   +NKD+T
Sbjct: 3   GFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDIT 59

Query: 206 CQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXX 385
            Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG                   
Sbjct: 60  AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEG 119

Query: 386 XXXXXXDEYNVEPVDXGPGAFRCYLDVGLARTTTGGXRVFGAMXG 520
                 ++Y VEP D     FR  LDVGL RTTTG  RVFGA+ G
Sbjct: 120 NIEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGN-RVFGALKG 162


>02_04_0381 - 22497519-22497769,22498157-22498247
          Length = 113

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 280 WCEGWSDKLCCSIFNWSAISTKTASK 357
           +C+G+ DK CC   +WS    K  SK
Sbjct: 90  YCDGYDDKSCCD--DWSGDCHKCCSK 113


>06_03_0957 + 26307062-26308987
          Length = 641

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 323 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSES 219
           L +L   L D+P HH V T    +R Q  H++ E+
Sbjct: 462 LGLLLSELCDEPWHHRVITF--SERPQLHHIKGET 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,796,283
Number of Sequences: 37544
Number of extensions: 235867
Number of successful extensions: 444
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)