Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E08f
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   4.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -1

Query: 313 AASILVTSSSLRASTSNPPDIVALI*VTTKPSCRIRHEASCRFFLPLSPQTPFSLISTN 137
           AAS +++S+ L  +TS           TTKPS +  ++       P +P  PF+ +  N
Sbjct: 151 AASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAP--PFATVGAN 207


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 321 HLGAENVNFQMETYVYKRRADGTHVINLRRTWGKLVLAA 437
           HLG + VN +      ++     +  +L   WG+  L A
Sbjct: 398 HLGGDEVNLECWAQHLQKTTTFMNYTDLHDLWGEFTLKA 436


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 138 FVLINENGVCGDKGKKKRHEASCR 209
           +VL+NE+  C  K  K     +CR
Sbjct: 35  YVLLNEDNPCARKCVKDSVPMTCR 58


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 328 PRWVVAASILVTSSSLRASTSNPPDIVALI*VTTKPSCRIR 206
           P+W  A   L  SSS + S    P IV       KP+ + R
Sbjct: 79  PQWPFAWGSLXRSSSPQTSAPTGPPIVRCALRKHKPNRKPR 119


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 293 CHQNACCNHPSWGRKC*LPDG 355
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 309 AATTHLGAENVNFQMETYVYKRRADGTH 392
           AAT HLG+       E++ +   +  TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,856
Number of Sequences: 336
Number of extensions: 2434
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)