Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E07f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4CJS7 Cluster: Putative uncharacterized protein; n=2; ...    33   5.2  
UniRef50_Q7RK53 Cluster: Putative uncharacterized protein PY0305...    32   6.9  
UniRef50_Q555B5 Cluster: Putative glycophosphotransferase; n=2; ...    32   9.2  

>UniRef50_A4CJS7 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriales|Rep: Putative uncharacterized protein -
           Robiginitalea biformata HTCC2501
          Length = 433

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +3

Query: 291 RRKPIRSKFFFNISKYSLHDHN----NNMFK*LCLVIGDDAVLKIS 416
           ++ P+ +KFFF  ++YS +D N    NN F+ L   + D +V+ ++
Sbjct: 233 KKFPVAAKFFFQFAEYSTYDKNVSPYNNRFRHLIKSVADYSVVSLA 278


>UniRef50_Q7RK53 Cluster: Putative uncharacterized protein PY03050;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03050 - Plasmodium yoelii yoelii
          Length = 1272

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 457 YRTEHYQSIFLNFYDIFKTASS-PITKHNYLNILLLWSCKEYFEILKKNLERIGFR 293
           Y+T  + SIFLN+YD +       + K+  +N L  ++  E FE +  N+E  G++
Sbjct: 144 YKT--FYSIFLNYYDKYSQIKQIKLNKNKIINHLRHYTNAERFEAIINNIETNGYQ 197


>UniRef50_Q555B5 Cluster: Putative glycophosphotransferase; n=2;
           Dictyostelium discoideum|Rep: Putative
           glycophosphotransferase - Dictyostelium discoideum AX4
          Length = 429

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = -2

Query: 448 EHYQSIFLNFYDIFKTASSPITKHNYLNILLLWSCKEYFEIL 323
           EHY++I LN  D+FK  + P ++ +YLN  ++     +FE L
Sbjct: 380 EHYKTICLN--DLFKFETFPNSQSHYLNNQIINDISNFFESL 419


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,312,522
Number of Sequences: 1657284
Number of extensions: 6504069
Number of successful extensions: 13982
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13980
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)