Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   1.4  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   1.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.8  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   5.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   5.8  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   5.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   5.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.8  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.7  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.7  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.7  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.7  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/35 (20%), Positives = 21/35 (60%)
 Frame = -3

Query: 216 VKVYFSINIILMQRHLLLTDVIKGTCDAVEYFESK 112
           +K+YF + ++ M    ++   ++   + +E+FE++
Sbjct: 1   MKIYFIVGLLFMAMVAIMAAPVEDEFEPLEHFENE 35


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/35 (20%), Positives = 21/35 (60%)
 Frame = -3

Query: 216 VKVYFSINIILMQRHLLLTDVIKGTCDAVEYFESK 112
           +K+YF + ++ M    ++   ++   + +E+FE++
Sbjct: 1   MKIYFIVGLLFMAMVAIMAAPVEDEFEPLEHFENE 35


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 54  MSILGRQL**SLNGMNTKKTYFQNILPR 137
           +S+LGR +   LNG++    Y +   PR
Sbjct: 86  LSVLGRHVRDFLNGLDNLHEYLKFSYPR 113


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 310 PSFFLIFQNIL 342
           P+F++++QNIL
Sbjct: 418 PAFYMLYQNIL 428


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 330 SKYSLHDHNNNMFK*LC 380
           + Y+  ++NNN +K LC
Sbjct: 87  NNYNYSNYNNNNYKQLC 103


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 492 NNYNCRDINNN 460
           NNYN ++ NNN
Sbjct: 307 NNYNYKNYNNN 317


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 492 NNYNCRDINNN 460
           NNYN ++ NNN
Sbjct: 318 NNYNYKNYNNN 328


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 495 HNNYNCRDINNNVTVQSIIRVYF*IFTI 412
           +NNYN  + NNN    +  ++Y+ I  I
Sbjct: 335 NNNYNNNNYNNNYN-NNCKKLYYNIINI 361


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 495 HNNYNCRDINNN 460
           +NNYN  + NNN
Sbjct: 94  YNNYNNNNYNNN 105


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 495 HNNYNCRDINNN 460
           +NNYN  + NNN
Sbjct: 94  YNNYNNNNYNNN 105


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 495 HNNYNCRDINNN 460
           +NNYN  + NNN
Sbjct: 94  YNNYNNNNYNNN 105


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 495 HNNYNCRDINNN 460
           +NNYN  + NNN
Sbjct: 94  YNNYNNNNYNNN 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,835
Number of Sequences: 438
Number of extensions: 2354
Number of successful extensions: 29
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)