Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   5.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 185 QSYITI*SSSLHEINVSPLGEKSILLILSVFSRNTLATLK 66
           Q Y+T+ S SL  I  S +     ++I++++S+N    +K
Sbjct: 183 QVYMTLVSLSLFIIPASIIATCYAIIIITIWSKNAKGFIK 222


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 209 RSTVKNTGSI*YILHMPKTLQFTVPP 286
           R+T+KN  +  Y +  PK+   + PP
Sbjct: 257 RTTLKNNRASPYPMQRPKSASLSPPP 282


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 383 DKHIVTTFFVCPGKYLMYLLS*RDKYRIVSSTLVE 279
           +KH+ TT+   P ++   LL     +R +S   +E
Sbjct: 341 NKHVTTTYPKQPLRFGKILLLVSSTFRTISGRTIE 375


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 108 NFVCIFTEYFGNFKASDNLINEF 40
           +FV IF   F +  ASD LIN F
Sbjct: 224 SFVDIFRLTFVDKTASDYLINVF 246


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 105 FVCIFTEYFGNFKASDNLI 49
           F C+ T  FG+   S N+I
Sbjct: 873 FTCVATNAFGSDDTSINMI 891


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,447
Number of Sequences: 336
Number of extensions: 3355
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)