Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EV27 Cluster: Clan CA, family C19, ubiquitin hydrolas...    33   4.0  
UniRef50_UPI00015B6259 Cluster: PREDICTED: similar to axonemal h...    33   5.2  

>UniRef50_A2EV27 Cluster: Clan CA, family C19, ubiquitin
            hydrolase-like cysteine peptidase; n=1; Trichomonas
            vaginalis G3|Rep: Clan CA, family C19, ubiquitin
            hydrolase-like cysteine peptidase - Trichomonas vaginalis
            G3
          Length = 960

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 404  KNNMKTRINADFPTIFLAFRLCVGNIQLSICLNLLRILP 520
            KN++KT++N D  T F   R+  GNI  +I +N  +I+P
Sbjct: 894  KNSVKTKLNVDNST-FNRMRVSFGNIGSTIAINTTKIVP 931


>UniRef50_UPI00015B6259 Cluster: PREDICTED: similar to axonemal heavy
            chain dynein type 3; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to axonemal heavy chain dynein type 3
            - Nasonia vitripennis
          Length = 4026

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = +1

Query: 88   FTDMGSN*LVRSHEIFLFFFWLCAVFRNYMNSERRNFENFL----ILTKT*QEILNATAK 255
            F DMG   +    ++F FF +     RNY+N    NF++F     +L +   ++     +
Sbjct: 1786 FIDMGEPHMFVVRKLFQFFNFFDLQIRNYVNIIESNFQSFAKLLDVLLEGESQVSTVWLQ 1845

Query: 256  MLL---YIFEVYSYLNSKSKRSQTILFKSIV 339
             +L    ++ + S L S+S++S  + F+ ++
Sbjct: 1846 CVLIFSIVWGICSMLVSESRKSMDLFFRKLL 1876


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,592,225
Number of Sequences: 1657284
Number of extensions: 6944122
Number of successful extensions: 14490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14482
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)