Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E02f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51785| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_51785| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 348

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/40 (22%), Positives = 24/40 (60%)
 Frame = +1

Query: 202 NFLILTKT*QEILNATAKMLLYIFEVYSYLNSKSKRSQTI 321
           N+ +++    ++L     + +Y++++++YL S+  R  TI
Sbjct: 52  NYFLVSLAVADLLVGAFSIPMYVYDIFTYLESRRSRLHTI 91


>SB_36072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 498

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 301 ICYLSNYKLRICIITFLLLHLISLVK---FLSKLESFQNYVFHYS 176
           I   S+Y LR   I  L+LH I   +   + S +  + +Y  HYS
Sbjct: 135 IARYSHYTLRTIHIKLLILHAIHTTRYAHYTSHIARYSHYTQHYS 179


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,258,034
Number of Sequences: 59808
Number of extensions: 222689
Number of successful extensions: 412
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)