Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E02f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g47760.1 68415.m05962 ALG3 family protein contains Pfam profi...    28   4.4  
At1g64920.1 68414.m07359 glycosyltransferase family protein cont...    27   7.7  

>At2g47760.1 68415.m05962 ALG3 family protein contains Pfam profile:
           PF05208 ALG3 protein
          Length = 438

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 436 ICINSRFHVIFLLRLF*LSNLTYKATLLIEHISLWI 329
           +C++ R H IF+LRLF   N  +  TLL   ++L++
Sbjct: 145 LCLSKRIHSIFVLRLF---NDCFAMTLLHASMALFL 177


>At1g64920.1 68414.m07359 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 452

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 92  VKCDFIIIALHD*SVGTLCDMVNNQYNK 9
           + CDFI I   +   G  CD + +QY K
Sbjct: 192 MNCDFISIRTCEEIEGKFCDYIESQYKK 219


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,218,724
Number of Sequences: 28952
Number of extensions: 156133
Number of successful extensions: 336
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)