Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309E01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    29   3.8  
BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p pro...    28   8.8  
AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-P...    28   8.8  

>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +1

Query: 91  ICMYVCIYVCMYL*L*LCIYVYTYILFCVCNRNLI*ISLHVPLFTLHYLWL 243
           + +Y+ IY+C+YL + L IY+  Y+   +     I +S+++ L+   YL++
Sbjct: 35  LSIYLSIYLCIYLSISLSIYLSIYLSIYLS----IYLSIYLSLYLSIYLYI 81


>BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p
           protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 109 IYVCMYL*L*LCIYVYTYILFCVCNRNLI 195
           +Y+C++L + + IY Y YI   VC    I
Sbjct: 22  VYICIHLYIYIYIYTYLYIDLYVCGEEEI 50


>AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-PA
           protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 109 IYVCMYL*L*LCIYVYTYILFCVCNRNLI 195
           +Y+C++L + + IY Y YI   VC    I
Sbjct: 22  VYICIHLYIYIYIYTYLYIDLYVCGEEEI 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,555,980
Number of Sequences: 53049
Number of extensions: 242202
Number of successful extensions: 352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)