Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309D11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa... 32 1.1
AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related prote... 32 1.1
BC130539-1|AAI30540.1| 734|Homo sapiens family with sequence si... 31 3.2
BC130513-1|AAI30514.1| 734|Homo sapiens family with sequence si... 31 3.2
AY457926-1|AAR20839.1| 734|Homo sapiens cancer associated nucle... 31 3.2
AF115392-1|AAD23438.1| 346|Homo sapiens retinal homeobox protei... 31 3.2
AK093288-1|BAC04122.1| 351|Homo sapiens protein ( Homo sapiens ... 30 5.7
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 29 7.5
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 29 7.5
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 29 7.5
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 29 7.5
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 29 7.5
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 29 7.5
AK223077-1|BAD96797.1| 458|Homo sapiens keratin 13 isoform a va... 29 7.5
AK223051-1|BAD96771.1| 458|Homo sapiens keratin 13 isoform a va... 29 7.5
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 29 7.5
L41066-1|AAA79175.1| 902|Homo sapiens NF-AT3 protein. 29 9.9
BC053855-1|AAH53855.1| 902|Homo sapiens nuclear factor of activ... 29 9.9
BC008857-1|AAH08857.2| 842|Homo sapiens NFATC4 protein protein. 29 9.9
>BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor-li
protein.
Length = 1219
Score = 32.3 bits (70), Expect = 1.1
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 61 GPAKPPPMRV-----SELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALREQVQ 225
GPA PPP+RV L L PH+ + A + Y ++ L P LR++
Sbjct: 767 GPAPPPPIRVRVQVQDHLFLIPVPHSSDTHSVAWLAEQAAQRYYQTCGLLPRLTLRKEGA 826
Query: 226 TFVDQTDFIKHSIQDNYHEFQDKSEW 303
Q D I +Q N + + W
Sbjct: 827 LLAPQ-DLIPDVLQSNDEVLAEVTSW 851
>AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related protein
variant protein.
Length = 897
Score = 32.3 bits (70), Expect = 1.1
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 61 GPAKPPPMRV-----SELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALREQVQ 225
GPA PPP+RV L L PH+ + A + Y ++ L P LR++
Sbjct: 626 GPAPPPPIRVRVQVQDHLFLIPVPHSSDTHSVAWLAEQAAQRYYQTCGLLPRLTLRKEGA 685
Query: 226 TFVDQTDFIKHSIQDNYHEFQDKSEW 303
Q D I +Q N + + W
Sbjct: 686 LLAPQ-DLIPDVLQSNDEVLAEVTSW 710
>BC130539-1|AAI30540.1| 734|Homo sapiens family with sequence
similarity 111, member B protein.
Length = 734
Score = 30.7 bits (66), Expect = 3.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 250 IKHSIQDNYHEFQDKSEWIFKYLREEENK 336
+ +I Y F+++++W+ KY REE+ +
Sbjct: 394 LNEAIMHQYPNFKEEAQWVRKYFREEQKR 422
>BC130513-1|AAI30514.1| 734|Homo sapiens family with sequence
similarity 111, member B protein.
Length = 734
Score = 30.7 bits (66), Expect = 3.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 250 IKHSIQDNYHEFQDKSEWIFKYLREEENK 336
+ +I Y F+++++W+ KY REE+ +
Sbjct: 394 LNEAIMHQYPNFKEEAQWVRKYFREEQKR 422
>AY457926-1|AAR20839.1| 734|Homo sapiens cancer associated
nucleoprotein protein.
Length = 734
Score = 30.7 bits (66), Expect = 3.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 250 IKHSIQDNYHEFQDKSEWIFKYLREEENK 336
+ +I Y F+++++W+ KY REE+ +
Sbjct: 394 LNEAIMHQYPNFKEEAQWVRKYFREEQKR 422
>AF115392-1|AAD23438.1| 346|Homo sapiens retinal homeobox protein
RX protein.
Length = 346
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 458 QTSPIAVVPAPAYIILLINPPLSPNMKPVRPPIATAP 348
Q+ P + P P L +PPL P ++P+ PP + P
Sbjct: 268 QSLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPPSYP 304
>AK093288-1|BAC04122.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ35969 fis, clone TESTI2013144, moderately
similar to CARBOXYPEPTIDASE A1 PRECURSOR (EC 3.4.17.1).
).
Length = 351
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 40 PINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALREQ 219
P +E +GP+ V+ + + T H ++ + ++ Q Y LL PV RE
Sbjct: 287 PCSETYHGPSPQSEPEVAAIVNFITAHGNFKALISIHSYSQMLMYPYGRLLEPVSNQREL 346
Query: 220 VQ 225
V+
Sbjct: 347 VR 348
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMR---VSELPLYETP 117
P+SA + +A PI P PPP+R VS +P+ P
Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP 600
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMR---VSELPLYETP 117
P+SA + +A PI P PPP+R VS +P+ P
Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP 600
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 476 LVSSGKQTSPIAVVPAPAYIILLINPPLSPNMKPVRPPIATA 351
L S TSP+ + PAPA I L+ P + + PP A A
Sbjct: 50 LTPSPAGTSPLVLTPAPAQIPTLVPTPALARIPRLVPPPAPA 91
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMR---VSELPLYETP 117
P+SA + +A PI P PPP+R VS +P+ P
Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP 600
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMR---VSELPLYETP 117
P+SA + +A PI P PPP+R VS +P+ P
Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP 600
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 476 LVSSGKQTSPIAVVPAPAYIILLINPPLSPNMKPVRPPIATA 351
L S TSP+ + PAPA I L+ P + + PP A A
Sbjct: 50 LTPSPAGTSPLVLTPAPAQIPTLVPTPALARIPRLVPPPAPA 91
>AK223077-1|BAD96797.1| 458|Homo sapiens keratin 13 isoform a
variant protein.
Length = 458
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = -1
Query: 227 VCTCSLRARTGGNNADLR*LVFCSWALASRYSA*SACGVSYNGSSDTRMGGGFAGPFDSS 48
V TCS R +GG+ R V C + + G G +GGGF G F
Sbjct: 29 VSTCSTRFVSGGSAGGYRGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
Query: 47 LIGAAA 30
+ A
Sbjct: 89 FVDFGA 94
>AK223051-1|BAD96771.1| 458|Homo sapiens keratin 13 isoform a
variant protein.
Length = 458
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = -1
Query: 227 VCTCSLRARTGGNNADLR*LVFCSWALASRYSA*SACGVSYNGSSDTRMGGGFAGPFDSS 48
V TCS R +GG+ R V C + + G G +GGGF G F
Sbjct: 29 VSTCSTRFVSGGSAGGYRGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
Query: 47 LIGAAA 30
+ A
Sbjct: 89 FVDFGA 94
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMR---VSELPLYETP 117
P+SA + +A PI P PPP+R VS +P+ P
Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP 600
>L41066-1|AAA79175.1| 902|Homo sapiens NF-AT3 protein.
Length = 902
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKT 168
P+SA + + EE + P PPP+ ++ P P DY A++ QKT
Sbjct: 277 PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPF-DYVGAPPAESIPQKT 330
>BC053855-1|AAH53855.1| 902|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic, calcineurin-dependent 4
protein.
Length = 902
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKT 168
P+SA + + EE + P PPP+ ++ P P DY A++ QKT
Sbjct: 277 PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPF-DYVGAPPAESIPQKT 330
>BC008857-1|AAH08857.2| 842|Homo sapiens NFATC4 protein protein.
Length = 842
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 4 PNSARGVIKAAAPINEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKT 168
P+SA + + EE + P PPP+ ++ P P DY A++ QKT
Sbjct: 217 PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPF-DYVGAPPAESIPQKT 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.130 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,190,075
Number of Sequences: 237096
Number of extensions: 1732000
Number of successful extensions: 4227
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4219
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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