SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.4  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   4.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   5.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.7  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 32  RPPLSTRNQMVPRSLHPCGYRNYHYMKLHMPIMLSILKPKPM 157
           RP   T       S H C  +N  Y K+ MP +L+ +   P+
Sbjct: 8   RPSYCTWELNATNSPHTCRTKNGDYTKI-MPDILTAIGQTPL 48


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 55  SNGPAKPPPMRVSELPLYETPHADYAEYLEAK 150
           SNG   P   R S LP Y+  + +    LE +
Sbjct: 304 SNGVTFPQRNRFSSLPYYKYKYLNVINALEMR 335


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 307 FKYLREEENKEVRYGA 354
           +KY+RE  NKE R  A
Sbjct: 321 YKYIREIMNKESRISA 336


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 307 FKYLREEENKEVRYGA 354
           +KY+RE  NKE R  A
Sbjct: 321 YKYIREIMNKESRISA 336


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 55  SNGPAKPPPMRVSELPLYETPHADYAEYLEAK 150
           SNG   P   R S LP Y+  + +    LE +
Sbjct: 304 SNGVTFPQRNRFSSLPYYKYKYLNVINALEMR 335


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 441 CGTRTSIYYSPNKSTPESKYEACET 367
           CGTR S       +T  S   AC+T
Sbjct: 22  CGTRPSFVSDEMIATAASVVNACQT 46


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 14/58 (24%), Positives = 21/58 (36%)
 Frame = +1

Query: 43  INEESNGPAKPPPMRVSELPLYETPHADYAEYLEAKAHEQKTSYLKSALLPPVRALRE 216
           +  E+   A+P   R   +P    PH       EA+    +  Y+     P  R  RE
Sbjct: 88  LRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRRE 145


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 151 LWLQDTQHNRHVEFHIMVVPI 89
           +WL DT    H +F   ++P+
Sbjct: 142 IWLPDTYFIMHGDFKDPLIPV 162


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 151 LWLQDTQHNRHVEFHIMVVPI 89
           +WL DT    H +F   ++P+
Sbjct: 142 IWLPDTYFIMHGDFKDPLIPV 162


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 151 LWLQDTQHNRHVEFHIMVVPI 89
           +WL DT    H +F   ++P+
Sbjct: 193 IWLPDTYFIMHGDFKDPLIPV 213


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 151 LWLQDTQHNRHVEFHIMVVPI 89
           +WL DT    H +F   ++P+
Sbjct: 142 IWLPDTYFIMHGDFKDPLIPV 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.130    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,207
Number of Sequences: 438
Number of extensions: 3645
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)

- SilkBase 1999-2023 -