Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309D08f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 137 4e-33
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 81 5e-16
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 58 4e-09
SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 33 0.19
SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_53228| Best HMM Match : CITED (HMM E-Value=2.5) 31 0.76
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 31 0.76
SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) 30 1.0
SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_4563| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) 30 1.3
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 29 1.8
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_56796| Best HMM Match : CITED (HMM E-Value=1.2) 29 2.3
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 2.3
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3) 29 3.1
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8) 28 5.4
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 28 5.4
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.1
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 27 7.1
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 7.1
SB_38860| Best HMM Match : GRP (HMM E-Value=0.47) 27 7.1
SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.1
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 7.1
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_13763| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 27 9.4
SB_5507| Best HMM Match : TP2 (HMM E-Value=4) 27 9.4
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 27 9.4
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 137 bits (332), Expect = 4e-33
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
Frame = +1
Query: 25 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSA 204
PK P++ GFEC+G +E++GE VT VG +V+ L Y W E V A+ Y +PE M+
Sbjct: 93 PKPPYVCGFECSGVVEELGEEVTGIDVGARVICLAPYGMWTEYACVDAKMCYVMPEAMTF 152
Query: 205 LDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCSK 384
+ AI Y+ A+L+LF + NL KS+LVH K+VE VTVFG S+
Sbjct: 153 EEGAAIPITYLTAHLILFHLGNLGLRKSVLVHMAAGGVGTAVTQICKSVEGVTVFGTASE 212
Query: 385 SKHEALKTNNNNIDHLLE-RGSDYTSEVRKVTPDGVNIVLD 504
+KHEA++ + H ++ R DY +VR+++PDGV++VLD
Sbjct: 213 NKHEAIQA--QGVTHPIDYRKEDYVKKVREISPDGVDLVLD 251
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 81.0 bits (191), Expect = 5e-16
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Frame = +1
Query: 34 PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDA 213
P GFE +G I+ GENVT F++G +V + +++E + VP ++ALP+ MS +A
Sbjct: 71 PITPGFEFSGVIQWKGENVTEFEIGQEVFGASLFGSYSECIRVPKNQLFALPKKMSKNEA 130
Query: 214 VAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCSKSKH 393
+ T + A+ FE+A+ PG +LVHS K + GV + H
Sbjct: 131 AGLPTVALTAWYAFFELAHTRPGAWVLVHSAAGGVGSMLVQMAK-IAGCHAVGVVG-AGH 188
Query: 394 EALKTNNNNIDHLLERGS-DYTSEVRKVTPDGVNIVLD 504
+ + DH++++ + D E + + PDG + V D
Sbjct: 189 KIDFVRSLGCDHVIDKSAQDLWQEAKVICPDGFSAVFD 226
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 58.0 bits (134), Expect = 4e-09
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 22 PPKTPFILGFECAGEIEQVGENVT-NFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGM 198
PP ILG E +G +E++G ++ GD+V+AL +AE +V +V +P+GM
Sbjct: 80 PPGESEILGLEVSGIVEELGSACNLGWRKGDKVMALVPGGGYAEFAAVQESHVMPIPKGM 139
Query: 199 SALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHS 303
S DA I ++ ++ LL + ++ G +L+H+
Sbjct: 140 SQSDAATIPEVWLTSFQLLHLLGDIQQGDKVLIHA 174
>SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 51.6 bits (118), Expect = 4e-07
Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 2/162 (1%)
Frame = +1
Query: 25 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYR-AWAELVSVPAQYVYALPEGMS 201
P+ PF G AG I +G+ VT KVGD V L ++AE V+ L +
Sbjct: 315 PELPFTPGNYGAGIIHAIGDEVTKHKVGDHVYTLSTLTGSYAEYTVCEEDNVFLLHSSLG 374
Query: 202 ALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCS 381
+ + Y AY L PG+++LVH + + V G
Sbjct: 375 FSEGANVGITYFTAYRALCHRLGAKPGETVLVHGASGGVGTAAVQIARAY-GMHVIGTAG 433
Query: 382 KSKHEALKTNNNNIDHLLERGSDYTSEVRKVTP-DGVNIVLD 504
SK E L R +YT + + T G +++L+
Sbjct: 434 SSKGEELVRQAGAHHVFNHRELNYTQGILEATDGQGPDVILE 475
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 16 EAPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 129
E P +LG E +G + VG +V N +GD+VV P
Sbjct: 96 ELPAAKCVVLGHEFSGVVSDVGSDVKNVSIGDRVVVNP 133
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 34 PFILGFECAGEIEQVGENVTNFKVGDQVVALP 129
P +LG E +G I VGE V++ K GD+V P
Sbjct: 52 PMVLGHESSGVICAVGEGVSDLKEGDRVAIEP 83
>SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP-P*NW*HFRQLARFHQRIRSPR 41
Q PG+ + ART V AR R T EPP RP P R+LA++++ R+ +
Sbjct: 800 QEPGKQHPKPARTPVAAVPAAARDARITSPEPPATRPHPGRVEAGRRLAKWNRTNRAKK 858
>SB_53228| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 417
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 148 QEPGKQLKEPARTPVAAVPAAARDARITSPEPPATRP 184
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 1477 QEPGKQLKEPARTPVAAVPAAARDARITSPEPPATRP 1513
>SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)
Length = 599
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 405 QEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 441
>SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 264 QEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 300
>SB_4563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1473
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 1007 QEPGKQHQEPARTPVAAVPAAARDTRITSPEPPATRP 1043
>SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)
Length = 771
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP-P*NW*HFRQLARFHQRIRSPR 41
Q PG+ ART + AR R T EPP RP P R+LA++++ R+ +
Sbjct: 366 QEPGKQHQEPARTPVAALPAAARDARITSPEPPATRPHPGRVEAGRRLAKWNRTNRAKK 424
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/81 (19%), Positives = 33/81 (40%)
Frame = +1
Query: 58 AGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYV 237
+G + + FK D+V + E V + P+G++ + A + N +
Sbjct: 175 SGVVTGANSTSSRFKTNDRVCGIMSPCRVGEKVRCKEARLMTQPQGLNGMQAATLPINII 234
Query: 238 VAYLLLFEMANLTPGKSLLVH 300
+A+ +L + LL+H
Sbjct: 235 LAWKILSRALSDKKSAFLLIH 255
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V AR R T EPP RP
Sbjct: 1826 QEPGKQHQEPARTPVAAVPAAARDARITSLEPPATRP 1862
>SB_56796| Best HMM Match : CITED (HMM E-Value=1.2)
Length = 431
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ +ART + AR R T EPP RP
Sbjct: 22 QEPGKQRQESARTPVAALPAAARDARITSPEPPATRP 58
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 208 PGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRPP 101
P Q F A +T P P G G PP+G PP
Sbjct: 207 PHQLFADAPPIQTSTSLPPMIPPVGMLGHPPMGAPP 242
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 40 ILGFECAGEIEQVGENVTNFKVGDQVVALP 129
ILG + G ++++G +V + VGD+VV P
Sbjct: 56 ILGHQFVGIVKEIGADVQHVSVGDRVVINP 85
>SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 11 GTRLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLSP 130
G+ L +LL W + K ++ P RW WWL P
Sbjct: 239 GSILGGKLLGIWIDLNVPKGVRITPFDP--RWMGAWWLGP 276
>SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3)
Length = 220
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
+ PG+ ART V AR R T EPP RP
Sbjct: 22 KEPGKQHQEPARTPVAAVPAAARDARITSPEPPATRP 58
>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ ART V A R T EPP RP
Sbjct: 761 QEPGKQHQEPARTPVAAVPAAAHDARITSPEPPATRP 797
>SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8)
Length = 1150
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 127 PEYRAWAELVSVPAQYVYALPEGMSALDAVAITTN 231
P RA +SV + +Y LPEG+ LD++ +T+N
Sbjct: 572 PPSRASMAFLSVHIR-LYPLPEGLKLLDSLLLTSN 605
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 204 GRHSFGQRVHVLGRYRHQLGP 142
G H+ G R+H LG H +GP
Sbjct: 497 GIHTLGSRIHTLGSGIHTIGP 517
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = -2
Query: 211 HPGQTFLRAARTRTGPVQTPARPKRGTRGEP-----PLGRPP 101
HPG +R R + GP P P G P P G PP
Sbjct: 269 HPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEPP 310
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 34 PFILGFECAGEIEQVGENVTNFK 102
P ILG E G +E VGE VT K
Sbjct: 58 PCILGHEGGGIVESVGEGVTKVK 80
>SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 323
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 53 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 83
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 166 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 196
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 288
>SB_38860| Best HMM Match : GRP (HMM E-Value=0.47)
Length = 212
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 423 RPPAREGQRLHQRSQEGNSXWRKHCAGLPSAAR 521
R PA E + S N +RK+C GLP R
Sbjct: 161 RRPAIEHSEIFNASTPKNVTFRKYCEGLPKELR 193
>SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1376
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 208 PGQTFLRAARTRTGPVQTPARPKRGTRGEPPL 113
PG ++ ++ G V+ P++P+RG++ P+
Sbjct: 830 PGHSYQNFPFSKAGSVEKPSKPERGSKCSKPV 861
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 442 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 472
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPRSLSKSCGVVNIQGL 288
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 258 AATWSPTLATLTANPPRSLSKSCGVVNIQGL 288
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 122 ATTWSPTLKLVTFSPTCSISPAHSKPKMKGV 30
A TWSPTL +T +P S+S + ++G+
Sbjct: 542 AATWSPTLATLTANPPKSLSKSCGVVNIQGL 572
>SB_13763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 424 RCYCCLSSAPRACFWSRHQ 368
RC+C L + R CF+SR++
Sbjct: 277 RCFCPLRTTXRKCFYSRNK 295
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 10 RHEAPPKTPFILGFECAGEIEQVGENVT-NFKVGDQVVALPEYRAWAELVSVPAQYVYAL 186
R++ K PF G E GE+ G++ F VG Q V + +AE V++ + + +
Sbjct: 61 RYKPWNKPPFDAGLEGLGEVVATGKDYKGKFSVG-QPVMFMRFGGFAEYVTLTEKDIVPV 119
Query: 187 P 189
P
Sbjct: 120 P 120
>SB_5507| Best HMM Match : TP2 (HMM E-Value=4)
Length = 524
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 214 QHPGQTFLRAARTRTGPVQTPARPKRGTRGEPPLGRP 104
Q PG+ A T + AR R T EPP RP
Sbjct: 202 QEPGKQHQEPAHTPVAALPAAARDARITSPEPPATRP 238
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 396 GAEDKQQ*HRPPAREGQRLHQRSQEGNSXWRKH 494
G++ + +RPP +R H R + N+ RKH
Sbjct: 821 GSQSDNELNRPPQDRHRRHHHRRRHHNNKHRKH 853
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,409,103
Number of Sequences: 59808
Number of extensions: 417890
Number of successful extensions: 1207
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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