Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309D08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 39 0.002
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 38 0.004
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 38 0.004
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 38 0.004
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 36 0.013
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 32 0.22
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 31 0.66
U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical pr... 29 1.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 2.7
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 2.7
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 2.7
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 28 3.5
U41029-1|AAF99951.1| 479|Caenorhabditis elegans Hypothetical pr... 28 4.7
U39850-10|AAA81060.2| 439|Caenorhabditis elegans Hypothetical p... 28 4.7
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 27 6.2
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 27 6.2
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 27 8.1
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 27 8.1
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 27 8.1
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 27 8.1
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 27 8.1
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 62.9 bits (146), Expect = 1e-10
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = +1
Query: 25 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSA 204
P P++ G + AG +E VGE+V N KVGD+V E + AE V+V + LPEG+S
Sbjct: 64 PNLPYVPGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAV--NRPFELPEGVSF 121
Query: 205 LDAVAITTNYVVAYLLLFEMANLTPGKSLLVH 300
+ ++ Y+ AY LF +A G +LVH
Sbjct: 122 EEGASLGVPYLTAYRALFHLAGAKTGDVILVH 153
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 38.7 bits (86), Expect = 0.002
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Frame = +1
Query: 25 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVA-LPEYRAWAELVSVPAQYVYALPEGMS 201
P P + G E G++ VG NV++ KVGD V+ W EL ++ + +S
Sbjct: 73 PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132
Query: 202 ALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCS 381
A N AY +L + +L G ++ + + + TV V S
Sbjct: 133 MEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRS 192
Query: 382 KSKHEAL--KTNNNNIDHLLERGSDYTSEVRKVTPDGVNIVLDC 507
+ E L + + D ++ + Y+ RK GV + L+C
Sbjct: 193 RDNLEELVKELKDLGADEVITQEELYS---RKKKFPGVKLALNC 233
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 13 HEAPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 126
H+ P +LG E +G +E VGE VT F GD VV L
Sbjct: 58 HDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 13 HEAPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 126
H+ P +LG E +G +E VGE VT F GD VV L
Sbjct: 58 HDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 13 HEAPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 126
H+ P +LG E +G +E VGE VT F GD VV L
Sbjct: 60 HDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 28 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 129
K P +LG E +G + ++G V FKVGD++ P
Sbjct: 59 KEPMVLGHESSGVVSEIGSEVKGFKVGDRIAMEP 92
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 13 HEAPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 126
H+ P +LG E +G +E VG+ VT F GD VV L
Sbjct: 231 HDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.041
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 28 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 129
K P I+G E +G + +VG V + KVGD++ P
Sbjct: 59 KEPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEP 92
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 34 PFILGFECAGEIEQVGENVTNFKVGDQ 114
P + G E AG + Q+G+NVT +++GD+
Sbjct: 64 PLVGGHEGAGSVVQIGKNVTGWQLGDK 90
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 520 LAAEGNPAQCLRHXELPS*LRWCSRCPSRAGGRCYCCLS 404
+++ GN C + E P+ WC + +GG CCLS
Sbjct: 694 ISSIGNAESCTKDEECPTSTHWCHKLGLASGG--MCCLS 730
>U10401-9|AAA19054.4| 771|Caenorhabditis elegans Hypothetical
protein T20B12.1 protein.
Length = 771
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 105 HLKIGDIFANLLDFTSAFEAQDERSLR 25
H+ +GDI NL FT A E D+R+ R
Sbjct: 426 HVYLGDITRNLEYFTKAIELSDDRNAR 452
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 400 LKTNNNNIDHLLERGSDYTSEVRKVT 477
L+ N+ IDHL + +D+TS+VR +T
Sbjct: 1260 LQAANDRIDHLTKTVNDHTSKVRDLT 1285
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 400 LKTNNNNIDHLLERGSDYTSEVRKVT 477
L+ N+ IDHL + +D+TS+VR +T
Sbjct: 1333 LQAANDRIDHLTKTVNDHTSKVRDLT 1358
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 400 LKTNNNNIDHLLERGSDYTSEVRKVT 477
L+ N+ IDHL + +D+TS+VR +T
Sbjct: 1333 LQAANDRIDHLTKTVNDHTSKVRDLT 1358
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 31 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 153
TP I F+ EI+ + + ++ K+G VA+ ++ W+ +
Sbjct: 98 TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138
>U41029-1|AAF99951.1| 479|Caenorhabditis elegans Hypothetical
protein F47G3.3 protein.
Length = 479
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 453 HQRSQEGNSXWRKHCAGLPSAA 518
H+ QEG+S W++ C L AA
Sbjct: 190 HEYQQEGSSYWKEECLALLKAA 211
>U39850-10|AAA81060.2| 439|Caenorhabditis elegans Hypothetical
protein F52C9.3 protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 101 RWATKWWLSPSTALGPSWC-LYRPSTCTRCPKECLPWMLLPSPRTTWWPI 247
RWA W + P C + TC C K C P ++ +P+ WW +
Sbjct: 244 RWAYFWEML-KRGPAPIECHVEYEETCAGCEK-CRPKPIIEAPQWRWWHV 291
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 303 RWRRCGTSCSPVGEDGRKRHRVWCLLQKQARGAEDKQ 413
+W C SC + G +R +VWC + + +RG ++
Sbjct: 247 QWTECSRSC----DSGERRRQVWCEI-RDSRGKTQRR 278
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 303 RWRRCGTSCSPVGEDGRKRHRVWCLLQKQARGAEDKQ 413
+W C SC + G +R +VWC + + +RG ++
Sbjct: 581 QWTECSRSC----DSGERRRQVWCEI-RDSRGKTQRR 612
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 25 PKT-PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMS 201
PKT P LGF +G + + + GD+ E+ L + + Y LP G+
Sbjct: 480 PKTLPSDLGFSVSGALRWINGHQILMSSGDEFAVYDEFWNQVTLKNRISSYFPNLPRGVK 539
Query: 202 ALDA------VAITTNYVVAY 246
+++ A T+N V Y
Sbjct: 540 GVESPAGSVITAFTSNQVFEY 560
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 25 PKT-PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMS 201
PKT P LGF +G + + + GD+ E+ L + + Y LP G+
Sbjct: 480 PKTLPSDLGFSVSGALRWINGHQILMSSGDEFAVYDEFWNQVTLKNRISSYFPNLPRGVK 539
Query: 202 ALDA------VAITTNYVVAY 246
+++ A T+N V Y
Sbjct: 540 GVESPAGSVITAFTSNQVFEY 560
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 195 NVCPGCCCHHHELRGGLSAALRDG*LDS--RQEST---RAFRWRRCGTSCSP-VGEDGRK 356
++CP H E+ L+ L D D+ Q S+ RA W CG S P VGE+ ++
Sbjct: 231 SMCPIAESEHVEILQKLAGILMDNWADAVTTQPSSFLIRAIVWVCCGLSARPKVGEEKKR 290
Query: 357 RHR 365
++
Sbjct: 291 NYK 293
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 221 SPRTTWWPICCSSRWLT 271
SP TW IC SSRW T
Sbjct: 2 SPLLTWNLICVSSRWYT 18
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 221 SPRTTWWPICCSSRWLT 271
SP TW IC SSRW T
Sbjct: 2 SPLLTWNLICVSSRWYT 18
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 73 QVGENVTNFKVGDQVVALPEYRAW 144
Q G+ VT KVGD + LP R W
Sbjct: 488 QAGQQVTR-KVGDDLARLPTLRVW 510
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 73 QVGENVTNFKVGDQVVALPEYRAW 144
Q G+ VT KVGD + LP R W
Sbjct: 488 QAGQQVTR-KVGDDLARLPTLRVW 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,859
Number of Sequences: 27780
Number of extensions: 293363
Number of successful extensions: 984
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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