Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309D05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 32 1.1
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 32 1.1
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 31 1.9
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 31 1.9
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 31 1.9
X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein. 31 2.4
BC130317-1|AAI30318.1| 49|Homo sapiens metallothionein 1D (pse... 31 2.4
BC130315-1|AAI30316.1| 49|Homo sapiens metallothionein 1D (pse... 31 2.4
BC101152-1|AAI01153.1| 177|Homo sapiens KRTAP1-3 protein protein. 31 2.4
BC020757-1|AAH20757.1| 62|Homo sapiens MT1G protein protein. 31 2.4
AF348999-1|AAO32959.2| 49|Homo sapiens MTM protein. 31 2.4
AB081339-1|BAC15620.1| 141|Homo sapiens keratin associated prot... 31 2.4
AB081338-1|BAC15619.1| 177|Homo sapiens keratin associated prot... 31 2.4
BC101555-1|AAI01556.1| 174|Homo sapiens keratin associated prot... 31 3.2
BC093841-1|AAH93841.1| 174|Homo sapiens keratin associated prot... 31 3.2
BC069533-1|AAH69533.1| 174|Homo sapiens keratin associated prot... 31 3.2
AJ406928-1|CAC27567.1| 174|Homo sapiens keratin associated prot... 31 3.2
X97261-1|CAA65916.1| 61|Homo sapiens Metallothionein 1R protein. 30 4.3
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 30 4.3
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 30 4.3
X76717-1|CAA54136.1| 61|Homo sapiens MT-1l protein protein. 30 5.7
X65607-1|CAA46557.1| 61|Homo sapiens metallothionein IX protein. 30 5.7
J03910-1|AAA59873.1| 61|Homo sapiens metallothionein-IG protein. 30 5.7
BC032338-1|AAH32338.1| 61|Homo sapiens metallothionein 1X prot... 30 5.7
BC018190-1|AAH18190.1| 61|Homo sapiens metallothionein 1X prot... 29 7.5
Z48314-1|CAA88307.1| 1042|Homo sapiens apomucin protein. 29 9.9
U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein. 29 9.9
U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein. 29 9.9
U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin pr... 29 9.9
D86566-1|BAA13116.1| 955|Homo sapiens notch related protein pro... 29 9.9
BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 9.9
BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 9.9
BC033831-1|AAH33831.1| 574|Homo sapiens MUC5AC protein protein. 29 9.9
AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 9.9
AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4 (Droso... 29 9.9
AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4 (Droso... 29 9.9
AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4 (Drosop... 29 9.9
AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein. 29 9.9
AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein. 29 9.9
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +2
Query: 128 QNTGTCPESSCACPEISC---ACPETSCACPES 217
Q G C SC E+SC CP T CA P S
Sbjct: 384 QERGLCVRCSCQAGEVSCEEQECPVTPCALPAS 416
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 119 CVSQNTGTCPESSCACPEISCACPETSC--ACPESSC 223
C S G+C +SSC P C C + C C +SSC
Sbjct: 149 CCSSGCGSCCQSSCCNP---CCCQSSCCVPVCCQSSC 182
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 223
TC +Q C E C C C C + C C S C
Sbjct: 10 TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 223
TC +Q C E C C C C + C C S C
Sbjct: 10 TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 223
TC +Q C E C C C C + C C S C
Sbjct: 10 TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43
>X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein.
Length = 175
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2
Query: 98 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 223
FC Y +C +GTC S C +C E SC +C ETSC C S C
Sbjct: 8 FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50
>BC130317-1|AAI30318.1| 49|Homo sapiens metallothionein 1D
(pseudogene) protein.
Length = 49
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 223
+C + + TC SSC C E C +C + C+C C
Sbjct: 6 SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41
>BC130315-1|AAI30316.1| 49|Homo sapiens metallothionein 1D
(pseudogene) protein.
Length = 49
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 223
+C + + TC SSC C E C +C + C+C C
Sbjct: 6 SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41
>BC101152-1|AAI01153.1| 177|Homo sapiens KRTAP1-3 protein protein.
Length = 177
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2
Query: 98 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 223
FC Y +C +GTC S C +C E SC +C ETSC C S C
Sbjct: 8 FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50
>BC020757-1|AAH20757.1| 62|Homo sapiens MT1G protein protein.
Length = 62
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACPESSC 223
P SCA +SC C +SC C E C
Sbjct: 3 PNCSCAAAGVSCTC-ASSCKCKECKC 27
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 223
+C + SSC C E C +C ++ C+C C
Sbjct: 6 SCAAAGVSCTCASSCKCKECKCTSCKKSCCSCCPVGC 42
>AF348999-1|AAO32959.2| 49|Homo sapiens MTM protein.
Length = 49
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 223
+C + + TC SSC C E C +C + C+C C
Sbjct: 6 SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41
>AB081339-1|BAC15620.1| 141|Homo sapiens keratin associated protein
1.9 protein.
Length = 141
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2
Query: 98 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 223
FC Y +C +GTC S C +C E SC +C ETSC C S C
Sbjct: 8 FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50
>AB081338-1|BAC15619.1| 177|Homo sapiens keratin associated protein
1.8 protein.
Length = 177
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2
Query: 98 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 223
FC Y +C +GTC S C +C E SC +C ETSC C S C
Sbjct: 8 FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50
>BC101555-1|AAI01556.1| 174|Homo sapiens keratin associated protein
1.5 protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +2
Query: 134 TGTCPESSC--ACPEISC---ACPETSCACPESSC 223
+GTC S C +C E SC +C ETSC C S C
Sbjct: 53 SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86
>BC093841-1|AAH93841.1| 174|Homo sapiens keratin associated protein
1-5 protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +2
Query: 134 TGTCPESSC--ACPEISC---ACPETSCACPESSC 223
+GTC S C +C E SC +C ETSC C S C
Sbjct: 53 SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86
>BC069533-1|AAH69533.1| 174|Homo sapiens keratin associated protein
1-5 protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +2
Query: 134 TGTCPESSC--ACPEISC---ACPETSCACPESSC 223
+GTC S C +C E SC +C ETSC C S C
Sbjct: 53 SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86
>AJ406928-1|CAC27567.1| 174|Homo sapiens keratin associated protein
1.5 protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +2
Query: 134 TGTCPESSC--ACPEISC---ACPETSCACPESSC 223
+GTC S C +C E SC +C ETSC C S C
Sbjct: 53 SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86
>X97261-1|CAA65916.1| 61|Homo sapiens Metallothionein 1R protein.
Length = 61
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 119 CVSQNTGTCP-ESSCACPEISC-ACPETSCACPESSC 223
C G+C SSC C E C +C ++ C+C C
Sbjct: 5 CSCATGGSCSCASSCKCKECKCTSCKKSCCSCCPMGC 41
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 122 VSQNTGTCPESSCACPEISCACPETSCACPESSCL 226
V ++T P SSC P SC ++SC CP +SC+
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP-ASCV 274
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 122 VSQNTGTCPESSCACPEISCACPETSCACPESSCL 226
V ++T P SSC P SC ++SC CP +SC+
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP-ASCV 274
>X76717-1|CAA54136.1| 61|Homo sapiens MT-1l protein protein.
Length = 61
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 131 NTGTCPESSCACPEISCACPETSC-ACPESSC 223
N P SCAC SC C E C +C +S C
Sbjct: 4 NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34
>X65607-1|CAA46557.1| 61|Homo sapiens metallothionein IX protein.
Length = 61
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 131 NTGTCPESSCACPEISCACPETSC-ACPESSC 223
N P SCAC SC C E C +C +S C
Sbjct: 4 NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34
>J03910-1|AAA59873.1| 61|Homo sapiens metallothionein-IG protein.
Length = 61
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 223
+C + + TC SSC C E C +C ++ C+C C
Sbjct: 6 SCAAGVSCTCA-SSCKCKECKCTSCKKSCCSCCPVGC 41
>BC032338-1|AAH32338.1| 61|Homo sapiens metallothionein 1X
protein.
Length = 61
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 131 NTGTCPESSCACPEISCACPETSC-ACPESSC 223
N P SCAC SC C E C +C +S C
Sbjct: 4 NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34
>BC018190-1|AAH18190.1| 61|Homo sapiens metallothionein 1X
protein.
Length = 61
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 131 NTGTCPESSCACPEISCACPETSC-ACPESSC 223
N P SCAC SC C E C +C +S C
Sbjct: 4 NCSCSPVGSCACAG-SCKCNECKCTSCKKSCC 34
>Z48314-1|CAA88307.1| 1042|Homo sapiens apomucin protein.
Length = 1042
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACP 211
P++ CP+ SCAC + C P
Sbjct: 629 PQAGQCCPQYSCACNTSRCPAP 650
>U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein.
Length = 1999
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 645 KANCLCPDGSPGCAPPEDNCTCHHGHC 671
>U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin
protein.
Length = 1056
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACP 211
P++ CP+ SCAC + C P
Sbjct: 718 PQAGQCCPQYSCACNTSRCPAP 739
>D86566-1|BAA13116.1| 955|Homo sapiens notch related protein
protein.
Length = 955
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>BC033831-1|AAH33831.1| 574|Homo sapiens MUC5AC protein protein.
Length = 574
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACP 211
P++ CP+ SCAC + C P
Sbjct: 253 PQAGQCCPQYSCACNTSRCPAP 274
>AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 646 KANCLCPDGSPGCAPPEDNCTCHHGHC 672
>AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2005
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 149 ESSCACPEIS--CACPETSCACPESSC 223
+++C CP+ S CA PE +C C C
Sbjct: 648 KANCLCPDGSPGCAPPEDNCTCHHGHC 674
>AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein.
Length = 1081
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACP 211
P++ CP+ SCAC + C P
Sbjct: 760 PQAGQCCPQYSCACNTSRCPAP 781
>AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein.
Length = 1081
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 PESSCACPEISCACPETSCACP 211
P++ CP+ SCAC + C P
Sbjct: 760 PQAGQCCPQYSCACNTSRCPAP 781
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.143 0.534
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,840,535
Number of Sequences: 237096
Number of extensions: 307343
Number of successful extensions: 1494
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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