Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22VB3 Cluster: Putative uncharacterized protein; n=2; ...    36   0.43 
UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containi...    36   0.74 
UniRef50_UPI00006CFF84 Cluster: hypothetical protein TTHERM_0072...    35   1.3  
UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1; Dic...    35   1.3  
UniRef50_Q1NLI0 Cluster: NADH-quinone oxidoreductase; n=3; delta...    33   3.0  
UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q4N206 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A0CJQ2 Cluster: Chromosome undetermined scaffold_2, who...    32   9.2  

>UniRef50_Q22VB3 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1528

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 355  PFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYXKC 480
            P++YL T  +   DG+   E N  QQC  +C SC+      C
Sbjct: 1219 PYLYLNTCLQICPDGTFSDENNKCQQCHPLCKSCSSKSSKSC 1260


>UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containing
            protein; n=1; Tetrahymena thermophila SB210|Rep: DHHC
            zinc finger domain containing protein - Tetrahymena
            thermophila SB210
          Length = 4579

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +1

Query: 346  EKC----PFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYXKC 480
            EKC    PF+YL T  ++  +G+   E+N  Q+C  +C +C+  +   C
Sbjct: 2648 EKCDHSYPFLYLNTCLEKCPEGTYADEQNICQRCHPLCRTCSFKLATSC 2696


>UniRef50_UPI00006CFF84 Cluster: hypothetical protein TTHERM_00723060;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00723060 - Tetrahymena thermophila SB210
          Length = 1554

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 346  EKCPFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYXKC 480
            +K P+++L T  +   +G+   E N  +QC  +C +CT      C
Sbjct: 1121 KKYPYLHLNTCLESCPEGTYSNENNECEQCHPLCANCTSKSSNDC 1165


>UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1;
           Dichroplus maculipennis|Rep: Cytochrome oxidase subunit
           II - Dichroplus maculipennis
          Length = 123

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 512 FLMRPLCWMPQHFXYMFSVQDQQMCKHC 429
           +++ P CW P HF Y FS  +   C  C
Sbjct: 63  WILAPXCWQPNHFTYKFSSSNFNKCIRC 90


>UniRef50_Q1NLI0 Cluster: NADH-quinone oxidoreductase; n=3; delta
           proteobacterium MLMS-1|Rep: NADH-quinone oxidoreductase
           - delta proteobacterium MLMS-1
          Length = 208

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 226 APQASVSAEEREIRYS*RAMV*CNHFQVWCRVLIR*RIPKQSPQ 95
           AP+A  + E +E  +    +   NHFQ  CRV +R R+P+  PQ
Sbjct: 115 APEAEEAPEPQEDSFE--VVYDFNHFQELCRVTLRVRVPRSLPQ 156


>UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1;
           Vibrionales bacterium SWAT-3|Rep: Putative
           uncharacterized protein - Vibrionales bacterium SWAT-3
          Length = 343

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +3

Query: 267 LTLV*FIYNKTLFSNLRLKTFILHSYRKVPVYLFRDINETSERWLK 404
           +TLV  IYN +   +  LK++I HS   V +   +DI  TSER LK
Sbjct: 199 ITLVFLIYNFSTERDFSLKSYISHSKAHVNLEEKKDIPVTSERELK 244


>UniRef50_Q4N206 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 730

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 109 KQSPQSLGIPPLGCRINNKITQLMN 35
           KQSPQ  GI PLG ++N ++ +L N
Sbjct: 123 KQSPQGSGIRPLGMKMNMRMQELFN 147


>UniRef50_A0CJQ2 Cluster: Chromosome undetermined scaffold_2, whole
            genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
            undetermined scaffold_2, whole genome shotgun sequence -
            Paramecium tetraurelia
          Length = 2112

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 352  CPFIYLETLTKQVK--DGSSYGEKNSIQQCLHICWSCTENIYXKCC 483
            CP  YL  L+K VK  D   Y + N  QQC   C  CT     + C
Sbjct: 1569 CPTDYLYCLSKCVKTLDDGYYKDGNHCQQCDPKCIKCTSATVCQAC 1614


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,139,855
Number of Sequences: 1657284
Number of extensions: 9900332
Number of successful extensions: 23324
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23322
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)