Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 243 EHTNVLPHRRRCQPKRGRSGI 181
           E      H+RR +PKR R  I
Sbjct: 316 ERPRATDHQRRNEPKRPRPNI 336


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +3

Query: 240 VHQGHHKLDLTLV*FIYNKTLFSNLRLKT 326
           ++ GH+K  L+ V  I+N+ L ++  ++T
Sbjct: 208 LNNGHYKNFLSQVEIIHNEILVTHNEIQT 236


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +3

Query: 240 VHQGHHKLDLTLV*FIYNKTLFSNLRLKT 326
           ++ GH+K  L+ V  I+N+ L ++  ++T
Sbjct: 33  LNNGHYKNFLSQVEIIHNEILVTHNEIQT 61


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 258 CDVLDEHTNVLPHRRRCQP 202
           CDV+++   VLP+ +  +P
Sbjct: 96  CDVIEKPRKVLPNFKTDEP 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,629
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)