Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro...    28   8.8  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   8.8  
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P...    28   8.8  

>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p
           protein.
          Length = 1843

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/55 (23%), Positives = 32/55 (58%)
 Frame = -3

Query: 240 HTNVLPHRRRCQPKRGRSGIREGQWFDATTSRFGAGY*FDNEFPNNHRSHLAFLL 76
           +TN+ P  +  + ++ ++ +++ Q    T ++FG+    ++E  NN+ S ++F L
Sbjct: 821 NTNLQPTPKSTRKRQSKASVQQSQLPPPTMAQFGSS---ESESNNNNNSSISFAL 872


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
            protein protein.
          Length = 1830

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 117  EFPNNHRSHLAFLLLDAGSTIKSLN**TLAKSGSEYF 7
            + P  H  H  FL +DA ST K+L     AKS   YF
Sbjct: 1021 DVPAEHLLHSEFLDIDAESTAKTLGIRWRAKSDEFYF 1057


>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
            protein.
          Length = 2006

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/55 (23%), Positives = 32/55 (58%)
 Frame = -3

Query: 240  HTNVLPHRRRCQPKRGRSGIREGQWFDATTSRFGAGY*FDNEFPNNHRSHLAFLL 76
            +TN+ P  +  + ++ ++ +++ Q    T ++FG+    ++E  NN+ S ++F L
Sbjct: 984  NTNLQPTPKSTRKRQSKASVQQSQLPPPTMAQFGSS---ESESNNNNNSSISFAL 1035


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,939,274
Number of Sequences: 53049
Number of extensions: 474248
Number of successful extensions: 934
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)