Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 172 WRKTAVNIPLGQRRPQRPYDFD 237
           WR   +  P GQ  P  P  FD
Sbjct: 334 WRSYCIQPPCGQLNPINPNVFD 355


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 252 CENLKVEVVWTLGTSLAQRNVHRCLPPLPRQVYC 151
           CEN   +  + L T    R+V RC     +Q+ C
Sbjct: 34  CENRPADEYFRLTTEGDCRDVVRCTKSGLKQITC 67


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 201 GPETSPASIRLRLLDSHNTIKSL 269
           GP+  PAS+  R     N +K +
Sbjct: 79  GPQQQPASVARRNARERNRVKQV 101


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 123 GVAMASDEEDSIPDVGVEEDSGEHSSGPETSPASI 227
           G A A D+E  I        SG   +GP T  A +
Sbjct: 301 GRAWAMDDESDINGTPPLHISGPAEAGPLTKDAGL 335


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 348 KESVENTAIVAIVSN 304
           K+ + +T IVAI+SN
Sbjct: 380 KKVIRDTPIVAIISN 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,247
Number of Sequences: 336
Number of extensions: 2498
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)