Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309D01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128415-1|AAM75008.1|  310|Drosophila melanogaster GH05248p pro...    29   2.9  
AE014297-2784|AAF55759.2|  272|Drosophila melanogaster CG4342-PA...    29   2.9  

>AY128415-1|AAM75008.1|  310|Drosophila melanogaster GH05248p
           protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -3

Query: 354 LLKESVENTAIVAIVSNR*NKK*QYHISLKI*LYCENLKVEVVWTLGTSLAQRNVH 187
           L KE  E TAI+  +S++ N +     S ++    +  +VEVVW   TS A R+ H
Sbjct: 220 LRKEKDECTAILKTISHQINSEHSELQSHRLLSIFKMSEVEVVWPESTSAAARSGH 275


>AE014297-2784|AAF55759.2|  272|Drosophila melanogaster CG4342-PA
           protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -3

Query: 354 LLKESVENTAIVAIVSNR*NKK*QYHISLKI*LYCENLKVEVVWTLGTSLAQRNVH 187
           L KE  E TAI+  +S++ N +     S ++    +  +VEVVW   TS A R+ H
Sbjct: 182 LRKEKDECTAILKTISHQINSEHSELQSHRLLSIFKMSEVEVVWPESTSAAARSGH 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,522,574
Number of Sequences: 53049
Number of extensions: 418190
Number of successful extensions: 1247
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)