Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309C12f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4T8T5 Cluster: Chromosome undetermined SCAF7729, whole...    35   0.98 
UniRef50_A7I0W3 Cluster: Transcription Regulator Protein; n=1; C...    34   1.7  
UniRef50_Q625U3 Cluster: Putative uncharacterized protein CBG011...    33   3.0  
UniRef50_Q0TXL8 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A3U9G3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q81AX0 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  
UniRef50_Q8IM18 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A0BXM6 Cluster: Chromosome undetermined scaffold_135, w...    32   9.2  

>UniRef50_Q4T8T5 Cluster: Chromosome undetermined SCAF7729, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7729,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 98

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 384 RRLIMFTTKQQIKNANENRKN*TLCPCFHFVSI 482
           R L+M   K+++K  N+ + + TL PCF+FV +
Sbjct: 9   RGLVMNRAKERLKGGNDTKDSVTLLPCFYFVEV 41


>UniRef50_A7I0W3 Cluster: Transcription Regulator Protein; n=1;
           Campylobacter hominis ATCC BAA-381|Rep: Transcription
           Regulator Protein - Campylobacter hominis (strain ATCC
           BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
          Length = 207

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -3

Query: 495 LPELLSKQNGSMDTMFNFYDSHLRFLFVVLS*T*SVFGRP*SYIHINKIGVSVCNIE-IT 319
           L E++ K  GS+ T++N++D+   F   V+     +F R   +    K+  S    E +T
Sbjct: 36  LNEVIEKSGGSLSTIYNYFDNKESFFKAVMDENSKIFRR--KFEDKLKLNDSTDIREYLT 93

Query: 318 AFYYMHINILYTPK 277
            F  +++NI++ PK
Sbjct: 94  KFGEIYLNIMFNPK 107


>UniRef50_Q625U3 Cluster: Putative uncharacterized protein CBG01137;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG01137 - Caenorhabditis
           briggsae
          Length = 334

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -3

Query: 270 FFKFLSVCLFVPANLWNGWTDFDG 199
           FF  L+ CLFV A  WNGW  FDG
Sbjct: 134 FFMALNRCLFVVAEKWNGWF-FDG 156


>UniRef50_Q0TXL8 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 672

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +1

Query: 211 GPAVPEISRNKQTDRQKFKKMLFWCI*YIYMHVVKSGYFNITNRHSNFIYMY 366
           GPA+ ++S   Q    + ++  +W I Y+ +   ++ + +ITN H ++I  Y
Sbjct: 286 GPALKDMSATAQQIDIRLQQFCYWPIQYLTLRKRRTSWGSITNSHPDYIRFY 337


>UniRef50_A3U9G3 Cluster: Putative uncharacterized protein; n=1;
           Croceibacter atlanticus HTCC2559|Rep: Putative
           uncharacterized protein - Croceibacter atlanticus
           HTCC2559
          Length = 389

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +3

Query: 321 LFQYYKQTLQFYLYVYMITDGRRLIMFTTKQQ----IKNANENRKN*TLCPCFHFVSIIT 488
           +F++YK  L FY     I++GR    F  K+      KN  EN    +L P F +V I T
Sbjct: 175 IFEFYKNGLLFYQNTISISEGRIHSTFWNKEDNYFFNKNHAENFNYISLNPSFDYVGIKT 234

Query: 489 L 491
           L
Sbjct: 235 L 235


>UniRef50_Q81AX0 Cluster: Putative uncharacterized protein; n=2;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 14579 / DSM 31)
          Length = 494

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +3

Query: 270 NVILVYIIYLYACSKKRLF-QYYKQTLQFYLYVYMITDGRRLIMFTTKQQIKNANENRKN 446
           N IL+ I+Y   C +  L+ +Y +     Y+ +  I     +  FTT + IKN     K 
Sbjct: 19  NPILI-IVYGIFCYELALYCKYRRMNYNIYILLLCIVLFISITTFTTMRVIKNREYESKK 77

Query: 447 *TLCPCFHFVSIITLVILELFF 512
            T    +  +SII +V +  F+
Sbjct: 78  LTNSIAWRSISIIIIVAITSFY 99


>UniRef50_Q8IM18 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2033

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 120  RYSIIKLNVSEAKRGRVASINYEAFEMSVKITIE 19
            + +++K+N+SE K+ R+AS+N+   E   K  IE
Sbjct: 1196 KINLLKVNISEGKKERIASVNFNKCEDDNKNDIE 1229


>UniRef50_A0BXM6 Cluster: Chromosome undetermined scaffold_135, whole
            genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_135, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1671

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 511  KNSSKITRVIIETKWKHGHNVQFLRFSFAFFICCFVVNMISLRPSVIIY 365
            K + K+T +++  ++     + F+  SF +F C F  N I+L  SVI++
Sbjct: 1076 KKNQKLTLLVVLNRFSFFLQLVFI--SFTYFFCSFYYNPITLHNSVILF 1122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,853,327
Number of Sequences: 1657284
Number of extensions: 8540390
Number of successful extensions: 20014
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19998
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)