Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309C08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TSP9 Cluster: Tkp5 protein; n=4; Vanderwaltozyma poly...    36   0.74 
UniRef50_Q6AML0 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A1RR31 Cluster: ABC transporter related; n=1; Pyrobacul...    32   6.9  

>UniRef50_A7TSP9 Cluster: Tkp5 protein; n=4; Vanderwaltozyma
           polyspora DSM 70294|Rep: Tkp5 protein - Vanderwaltozyma
           polyspora DSM 70294
          Length = 1197

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 205 STPSGTISDILEGNVVDYYNKDPPTSFIEFKDFWISWHSG 324
           +T + +  +I E  ++ YYN + PTS ++ K  WI+  SG
Sbjct: 255 TTTNQSEKEIWESGMIGYYNAEKPTSNVQVKGVWIATESG 294


>UniRef50_Q6AML0 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 482

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 337 GLCPNIEPMRCIKLQNAKKIGFVSFHIPTIIDEAEVRWVIE 459
           G+C N  P  C+ +   KKIGF+S++  TI   A   + ++
Sbjct: 263 GICGNDIPENCLAVSFQKKIGFISYNNQTICSFAHGLYCVD 303


>UniRef50_A1RR31 Cluster: ABC transporter related; n=1; Pyrobaculum
           islandicum DSM 4184|Rep: ABC transporter related -
           Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
          Length = 253

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -2

Query: 520 HHPQFPYHFCDVSYLGI---LGVFQSP 449
           HHP FPY   DV   G    LG+FQSP
Sbjct: 83  HHPPFPYRVIDVVVTGFAPRLGLFQSP 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,292,905
Number of Sequences: 1657284
Number of extensions: 11323889
Number of successful extensions: 23322
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23322
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)