Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309C08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.41 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 441 LSFIYYCRDMKTYKTNFFCILKFY 370
           L   Y+CR    + T+F+C    Y
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAFSLY 319


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 169 ISRTTYNLLFKISTPSGTISDILEGNVVDYY 261
           I +  Y+L+     P   ++DI+ GN++  Y
Sbjct: 26  IKQHIYSLISLSYLPGPPVNDIISGNILPLY 56


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 169 ISRTTYNLLFKISTPSGTISDILEGNVVDYY 261
           I +  Y+L+     P   ++DI+ GN+   Y
Sbjct: 26  IKQHIYSLISLSYLPGPPVNDIISGNIPPLY 56


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 377 SFIHRMGSMLGHRPY*NFPLC 315
           + I  +G+ L +RP+ +FP C
Sbjct: 682 NLIIHVGTQLIYRPFSHFPRC 702


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 465 GSFNHPSNLSFIYYCRDMKTY 403
           G F+ P N +  Y CR   +Y
Sbjct: 564 GIFSDPKNCAAYYVCRSGLSY 584


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 185 ITFYSKFPPHQELYQTY*RVMLLIITTKTHQLLLSSSKIFGYRGTVENFNM 337
           I FYS   P   L Q    V+LLI+    H +L + +K   +   +EN  +
Sbjct: 47  IPFYSTLRPINLLVQIILDVILLIL--NVHTILTTITKRNQWCKLLENLKL 95


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 185 ITFYSKFPPHQELYQTY*RVMLLIITTKTHQLLLSSSKIFGYRGTVENFNM 337
           I FYS   P   L Q    V+LLI+    H +L + +K   +   +EN  +
Sbjct: 47  IPFYSTLRPINLLVQIILDVILLIL--NVHTILTTITKRNQWCKLLENLKL 95


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 185 ITFYSKFPPHQELYQTY*RVMLLIITTKTHQLLLSSSKIFGYRGTVENFNM 337
           I FYS   P   L Q    V+LLI+    H +L + +K   +   +EN  +
Sbjct: 367 IPFYSTLRPINLLVQIILDVILLIL--NVHTILTTITKRNQWCKLLENLKL 415


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 187 NLLFKISTPSGTISDILEGN 246
           N  F+   P+G+  D++ GN
Sbjct: 431 NQHFETGLPAGSYCDVISGN 450


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 283 FIEFKDFWISWHSG 324
           F+   D W+SW  G
Sbjct: 377 FLTRGDLWLSWEEG 390


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 184 YNLLFKISTPSGTISDILEGNVVDYYNKDPPTSFIEFKDFWI 309
           +N +F   T + T S+     ++  YN      F+ F  +W+
Sbjct: 20  HNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWL 61


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 184 YNLLFKISTPSGTISDILEGNVVDYYNKDPPTSFIEFKDFWI 309
           +N +F   T + T S+     ++  YN      F+ F  +W+
Sbjct: 38  HNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWL 79


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 256 YYNKDPPTSFIEFKDF 303
           YY+++PP  + E  DF
Sbjct: 26  YYHEEPPLFYEERPDF 41


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 471 YWGSFNHPSNLSFIYYCRDMKTYKTNFFCILKFYTS 364
           Y+G     + L    YC  +  +  + F IL +Y S
Sbjct: 306 YFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYAS 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,775
Number of Sequences: 336
Number of extensions: 3269
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)