BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309C08f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ821850-1|CAH25390.1| 426|Anopheles gambiae alpha-2,6-sialyltr... 25 1.2
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 23 6.2
DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein. 23 8.2
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 23 8.2
>AJ821850-1|CAH25390.1| 426|Anopheles gambiae
alpha-2,6-sialyltransferase protein.
Length = 426
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 134 SWLCKEPGLQWNSILQYLP*FPV 66
SW KEP WN I YLP P+
Sbjct: 174 SW--KEPPFTWNEIGSYLPTSPL 194
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 279 FFYRVQRFLDIVAQWKISIWSVS*H 353
F+ ++R+LD+V + + S W + H
Sbjct: 335 FYDNIKRWLDVVPENRFSNWVLGNH 359
>DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein.
Length = 409
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 166 WKANSNSYGTRVGSVKNLAFSGIQFYNISH 77
++A+ S+G V + K S IQ NI H
Sbjct: 68 YEASDTSFGNAVSNTKRELSSVIQNDNIDH 97
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 22.6 bits (46), Expect = 8.2
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3
Query: 285 YRVQRFLDIVAQWKISIWSV 344
Y+ F I+ W++ +W+V
Sbjct: 75 YQTMDFFSILPLWRLIVWNV 94
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,292
Number of Sequences: 2352
Number of extensions: 12489
Number of successful extensions: 68
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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