Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309C07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 3e-58
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 4e-34
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 141 4e-34
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 141 4e-34
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 127 5e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 74 6e-14
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 51 7e-07
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 44 6e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 37 0.009
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 36 0.015
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 35 0.047
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.25
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 32 0.33
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 0.58
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 29 1.8
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 3.1
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 4.1
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 28 5.4
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 5.4
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 5.4
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 27 7.1
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 7.1
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 7.1
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 7.1
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 7.1
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 7.1
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 7.1
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.1
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.1
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 27 7.1
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 27 7.1
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13) 27 9.4
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 221 bits (540), Expect = 3e-58
Identities = 110/149 (73%), Positives = 114/149 (76%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 182 QKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREC 361
QKESTLHLV NY+TP LAVL++YKVDENGKI RLRREC
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRREC 121
Query: 362 TGEQCGAGVFMAVMEDRHYCGKCHSTMVF 448
E CGAGVFMA DR YCGKC T VF
Sbjct: 122 PSESCGAGVFMASHFDRQYCGKCCLTYVF 150
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 141 bits (341), Expect = 4e-34
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI
Sbjct: 78 QISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNI 136
Query: 182 QKESTLHL 205
++ S LHL
Sbjct: 137 KQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 127 bits (307), Expect = 5e-30
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNI
Sbjct: 80 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 139
Query: 182 QK 187
QK
Sbjct: 140 QK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 74.1 bits (174), Expect = 6e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 104 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 208
IPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
I V TLTG+ I + + P TI VK I+ K G P +QQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 182 QKESTLHLV 208
+TLHL+
Sbjct: 133 FAGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPNQQRLIFAGKQLEDGRTLSDY 175
I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L +Y
Sbjct: 69 ITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEY 128
Query: 176 NIQKES 193
NI ++S
Sbjct: 129 NIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 178
Q+F T TL +D + +K++I+ K GIP + QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 179 IQK 187
+++
Sbjct: 67 LKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 26 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTLH 202
G TL+V +EN +A ++ + G+P ++ L G QL D +TL+ Y++++ +
Sbjct: 10 GSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYSVKENDVIL 69
Query: 203 LV 208
+V
Sbjct: 70 MV 71
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
++++TLTG L V P +TI +VKAKIQ E
Sbjct: 3 LYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 34.7 bits (76), Expect = 0.047
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 95 KEGIPPNQQRLIFAGKQLEDGRTLSDYN 178
+EGIP +QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 23 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 187
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 101 GIPPNQQRLIFAGKQLEDGRTLSDYN 178
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 8 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 187
FV G+ ITL P + ++ + G P ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 188 ESTLHL 205
+TL +
Sbjct: 229 GATLQI 234
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 62 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 205
T+ ++K + +K G+ + RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
+ ++T G T+ +E+ ++E++KA+ + + GIP RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 185 KEST 196
+++T
Sbjct: 245 QKAT 248
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 52 AVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWTYPLGLQY 180
+ Y +E E + RQR +S E D+C K R+T Y
Sbjct: 39 STEYTQESEGLDERQRARGKKSFECDICGKCFSRFTITTKYNY 81
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR---TLSDYNI 181
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 182 QKESTLHLV 208
+T+ L+
Sbjct: 120 PPYATISLI 128
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 326 ENGKIHRLRRECTGEQC 376
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 421 AVVTVLHHRHEHSGA 377
A++TV+HHRH H A
Sbjct: 525 AIITVIHHRHHHHPA 539
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 94 QRGNPSQSTEVDLCWKAAGRWTYPLGLQYPEGIHPPPGVEAS 219
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 415
YK D GK+ L+R C ++C ++ V D +
Sbjct: 364 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 397
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHS 436
YK D GK+ L+R C ++C + + C +C S
Sbjct: 515 YKCDNCGKVGHLKRVCQSKECKKXXXXQGGKPKTACHRCGS 555
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 568 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 599
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 415
YK D GK+ L+R C ++C ++ V D +
Sbjct: 207 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 240
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 63 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 94
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 20 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 151
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 372 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 403
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 898 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 929
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 245 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 276
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 202 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 233
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 66 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 97
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 268 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 299
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D GK+ L+R C ++C ++ V D
Sbjct: 428 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 459
>SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 57 QIPSRM*KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTIS 182
QIP M L ++ + E+ P+N +LL+ SW + + + T S
Sbjct: 124 QIPP-MKDLVYEPREENFPLNSNPALLKVSWTVGIDNWVTAS 164
>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
Length = 436
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 314 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 409
YK D +G + L+R C ++C ++ V D
Sbjct: 61 YKCDNSGNVGHLKRVCKSKECKETKYVEVSVD 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,298
Number of Sequences: 59808
Number of extensions: 297083
Number of successful extensions: 767
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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