Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309C07f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 206 7e-54
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 204 2e-53
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 204 3e-53
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 135 1e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 135 1e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 135 1e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 135 1e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 135 1e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 135 1e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 135 1e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 135 1e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 135 1e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 135 1e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 135 1e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 135 1e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 135 1e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 135 1e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 1e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 135 1e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 1e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 134 3e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 134 4e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 128 3e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 110 6e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 83 1e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 4e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 5e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 60 1e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 2e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 3e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 5e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 5e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 9e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 1e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 1e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 1e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 4e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 44 5e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 43 1e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 1e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 42 3e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 42 3e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 42 3e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 0.001
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 39 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 37 0.007
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.009
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.029
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.029
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.038
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.067
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.15
At1g11970.1 68414.m01383 hypothetical protein 32 0.20
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.36
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.36
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.1
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.1
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.1
At5g12280.1 68418.m01444 hypothetical protein 29 1.4
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 1.9
At1g47680.1 68414.m05297 hypothetical protein 29 1.9
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.4
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 28 4.4
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 28 4.4
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 5.8
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 7.7
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 206 bits (503), Expect = 7e-54
Identities = 101/153 (66%), Positives = 111/153 (72%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREC 361
QKESTLHLV Y+ P LAVL+FYKVD +GK+ RL++EC
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKEC 121
Query: 362 TGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDD 460
CG G FMA DRHYCGKC +T VFK D
Sbjct: 122 PSVSCGPGTFMASHFDRHYCGKCGTTYVFKKAD 154
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 204 bits (499), Expect = 2e-53
Identities = 100/152 (65%), Positives = 111/152 (73%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREC 361
QKESTLHLV Y+ P LAVL+FYKVD +GK+ RLR+EC
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKEC 121
Query: 362 TGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 457
CGAG FMA DRHYCGKC T V++ +
Sbjct: 122 PNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 204 bits (498), Expect = 3e-53
Identities = 99/152 (65%), Positives = 111/152 (73%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRREC 361
QKESTLHLV Y+ P LAVL+FYK+D +GK+ RLR+EC
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKEC 121
Query: 362 TGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 457
CGAG FMA DRHYCGKC T V++ +
Sbjct: 122 PNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 78 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 224
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 78 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 224
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 78 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 224
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 78 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 224
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 100
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 78 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 224
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 185 KESTLHLV 208
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 132 bits (319), Expect = 1e-31
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 153 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNI 212
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 213 QKESTLHLV 221
Score = 128 bits (309), Expect = 2e-30
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NI 136
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 137 QKESTLHLV 145
Score = 97.1 bits (231), Expect = 6e-21
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 157
QIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 229 QIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (327), Expect = 1e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 185 KESTLHLV 208
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 134 bits (324), Expect = 3e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNI 213
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 120 bits (288), Expect = 8e-28
Identities = 56/69 (81%), Positives = 64/69 (92%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+
Sbjct: 2 QIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNV 61
Query: 182 QKESTLHLV 208
Q++STLHL+
Sbjct: 62 QEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 134 bits (323), Expect = 4e-32
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNI
Sbjct: 80 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNI 139
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 127 bits (306), Expect = 5e-30
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 156 QIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 215
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 216 QKESTLHLV 224
Score = 118 bits (284), Expect = 2e-27
Identities = 60/70 (85%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYN 178
QIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYN
Sbjct: 232 QIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYN 291
Query: 179 IQKESTLHLV 208
IQKESTLHLV
Sbjct: 292 IQKESTLHLV 301
Score = 102 bits (245), Expect = 1e-22
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+I
Sbjct: 4 QIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSI 63
Query: 182 QKESTLHL 205
QK+S LHL
Sbjct: 64 QKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 128 bits (308), Expect = 3e-30
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 80 QIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNI 139
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 117 bits (281), Expect = 6e-27
Identities = 57/69 (82%), Positives = 63/69 (91%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNI
Sbjct: 4 QIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNI 63
Query: 182 QKESTLHLV 208
QKESTLHLV
Sbjct: 64 QKESTLHLV 72
Score = 104 bits (250), Expect = 3e-23
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I
Sbjct: 553 QIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDI 612
Query: 182 QKESTLHLV 208
K+STL+LV
Sbjct: 613 HKKSTLYLV 621
Score = 104 bits (249), Expect = 4e-23
Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRTLSDY 175
QIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG TL+DY
Sbjct: 320 QIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADY 379
Query: 176 NIQKESTLHLV 208
+IQKESTLHLV
Sbjct: 380 SIQKESTLHLV 390
Score = 99 bits (238), Expect = 9e-22
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
QIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI
Sbjct: 394 QIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNI 453
Query: 182 QKESTLHL 205
+ ESTLHL
Sbjct: 454 RNESTLHL 461
Score = 90.6 bits (215), Expect = 5e-19
Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = +2
Query: 5 IFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 169
IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+
Sbjct: 240 IFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLA 299
Query: 170 DYNIQKESTLHLV 208
YNIQK STL+LV
Sbjct: 300 HYNIQKGSTLYLV 312
Score = 87.0 bits (206), Expect = 7e-18
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Frame = +2
Query: 2 QIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGR 160
QIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED R
Sbjct: 156 QIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNR 215
Query: 161 TLSDYNIQKESTLHL 205
TL+DY I+ STL L
Sbjct: 216 TLADYGIRNRSTLCL 230
Score = 86.6 bits (205), Expect = 9e-18
Identities = 48/74 (64%), Positives = 53/74 (71%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 QIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR 160
QIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L R
Sbjct: 470 QIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSR 529
Query: 161 TLSDYNIQKESTLH 202
TL DYNIQK ST+H
Sbjct: 530 TLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 110 bits (264), Expect = 6e-25
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ
Sbjct: 88 IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147
Query: 185 KESTLHLV 208
+S LHL+
Sbjct: 148 NDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+
Sbjct: 2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNL 61
Query: 182 QKESTLHLV 208
++ S LHLV
Sbjct: 62 ERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 64.5 bits (150), Expect = 4e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 142
IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 52 IFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI
Sbjct: 142 RIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNI 201
Query: 182 QKESTL 199
+ ++ L
Sbjct: 202 KPDANL 207
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y++
Sbjct: 25 ELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHL 84
Query: 182 QKESTLHLV 208
+ TLHL+
Sbjct: 85 ENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/70 (41%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 178
QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+
Sbjct: 96 QIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYS 155
Query: 179 IQKESTLHLV 208
I+++++L LV
Sbjct: 156 IEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDY 175
+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 2 KIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEEN 61
Query: 176 NIQKES 193
N+ + S
Sbjct: 62 NVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 190
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 191 STLHLV 208
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 190
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 191 STLHLV 208
T+H+V
Sbjct: 82 HTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
+++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 3 VYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMIL 62
Query: 185 KESTLHL 205
ES L L
Sbjct: 63 FESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 173 YNIQKES 193
+ + S
Sbjct: 62 NKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 173 YNIQKES 193
+ + S
Sbjct: 62 NKVAENS 68
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.8 bits (106), Expect = 9e-06
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 178
+I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY+
Sbjct: 12 RIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYH 71
Query: 179 IQKESTLHLV 208
+++ TL+LV
Sbjct: 72 VEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS +
Sbjct: 2 RITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGV 61
Query: 182 QKESTLHLV 208
+ + L ++
Sbjct: 62 KDDDLLMMM 70
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 173 YNIQKESTL 199
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 173 YNIQKESTL 199
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 173 YNIQKESTL 199
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSD 172
++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL +
Sbjct: 2 KLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVE 61
Query: 173 YNIQKESTL 199
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 190
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 191 STL 199
S L
Sbjct: 65 SLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 190
V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I +
Sbjct: 5 VENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQN 64
Query: 191 STLHL 205
LHL
Sbjct: 65 PLLHL 69
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 178
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 10 QFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS--- 66
Query: 179 IQKESTLHLV 208
Q ++T++LV
Sbjct: 67 -QPDATVNLV 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 185 KESTLHLV 208
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 185 KESTLHLV 208
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 178
+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N
Sbjct: 662 KIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQN 721
Query: 179 IQKESTLHLV 208
+Q S +HL+
Sbjct: 722 VQPNSLVHLI 731
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 26 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 205
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 206 V 208
+
Sbjct: 604 M 604
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
+F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 3 VFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVIL 62
Query: 185 KESTLHL 205
S + L
Sbjct: 63 NHSRIQL 69
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLSD 172
Q+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+ D
Sbjct: 2 QVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDD 61
Query: 173 YNIQKESTLHL 205
Y I+ H+
Sbjct: 62 YKIKACDIFHM 72
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 178
+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N
Sbjct: 501 KIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQN 560
Query: 179 IQKESTLHLV 208
+Q S +HL+
Sbjct: 561 VQPNSLVHLL 570
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 175
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 176 NIQKESTLHLV 208
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I
Sbjct: 3 KVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQI 62
Query: 182 QKESTLHL 205
+ S + L
Sbjct: 63 RHNSRILL 70
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 178
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S
Sbjct: 10 QFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS--- 66
Query: 179 IQKESTLHLV 208
Q ++T++LV
Sbjct: 67 -QSDTTMNLV 75
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 172
+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 2 KIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEA 61
Query: 173 YNIQKESTLHLV 208
+ +S + ++
Sbjct: 62 NKVFDKSVIAII 73
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 184
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97
Query: 185 KESTLHL 205
S + L
Sbjct: 98 HNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 112
IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 51 IFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 154
+F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 3 VFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 139
V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 5 VEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 139
+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 2 KFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.038
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 41 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 154
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 33.9 bits (74), Expect = 0.067
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 163
++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 11 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 154
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 20 LTGKTITLEVEPSDTIENVKAKIQDKEGIP 109
L+ K I +E++P D IE +K I+++ GIP
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 199
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 5 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 178
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 179 IQKESTLHLV 208
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 208 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 89
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +2
Query: 56 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 172
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 56 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 29 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 181
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 187 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 89
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 205
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 184 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 89
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 481 LEGTYLXVVVFEDHRAMTLPAVVTVLHHRHEHSGAALLACAL 356
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 481 LEGTYLXVVVFEDHRAMTLPAVVTVLHHRHEHSGAALLACAL 356
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 56 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 208
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 96 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 200
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,646,442
Number of Sequences: 28952
Number of extensions: 202211
Number of successful extensions: 701
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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