Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309C03f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-P... 77 2e-13
UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious... 77 3e-13
UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:... 71 2e-11
UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p; ... 66 5e-10
UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious... 64 2e-09
UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,... 61 2e-08
UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aed... 56 4e-07
UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3; C... 56 7e-07
UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736 p... 54 2e-06
UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine ... 53 3e-06
UniRef50_UPI0001560C6B Cluster: PREDICTED: similar to adenosine ... 52 8e-06
UniRef50_Q9I8Y6 Cluster: Double-stranded RNA adenosine deaminase... 51 1e-05
UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19; Eutele... 50 4e-05
UniRef50_O75569 Cluster: Interferon-inducible double stranded RN... 50 4e-05
UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter ox... 48 1e-04
UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2; Chlor... 48 1e-04
UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanth... 48 2e-04
UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine ... 48 2e-04
UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3; Xenopus... 47 2e-04
UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia c... 47 2e-04
UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27; Epsilonproteobact... 47 2e-04
UniRef50_Q56UE8 Cluster: Putative double strand RNA binding prot... 46 5e-04
UniRef50_A7S1J6 Cluster: Predicted protein; n=1; Nematostella ve... 46 5e-04
UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing... 46 7e-04
UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28; Alphaproteobacter... 46 7e-04
UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas neptu... 45 0.001
UniRef50_A7S1J7 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.001
UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, R... 45 0.001
UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep: ... 45 0.001
UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter no... 44 0.002
UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium nucl... 44 0.002
UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n... 44 0.003
UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma proteobact... 44 0.003
UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia se... 43 0.004
UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3; Cystobacterineae... 43 0.005
UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3; Alphaproteobacte... 43 0.005
UniRef50_UPI0000DB79F1 Cluster: PREDICTED: similar to CG8273-PA;... 42 0.006
UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n... 42 0.006
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 42 0.006
UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen - A... 42 0.006
UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n... 42 0.009
UniRef50_Q16P61 Cluster: Putative uncharacterized protein; n=1; ... 42 0.009
UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium petr... 41 0.015
UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacte... 41 0.015
UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|R... 41 0.015
UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1; Psych... 40 0.026
UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|R... 40 0.026
UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep... 40 0.026
UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria (c... 40 0.026
UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 40 0.035
UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2; Magnetospirillum... 40 0.035
UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gamb... 40 0.035
UniRef50_O95793 Cluster: Double-stranded RNA-binding protein Sta... 40 0.035
UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 40 0.046
UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|R... 40 0.046
UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila pseudoobscu... 39 0.060
UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema denticol... 39 0.060
UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium th... 39 0.060
UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4; Alphaproteobacteri... 39 0.060
UniRef50_O36966 Cluster: Replicase polyprotein; n=1; Drosophila ... 39 0.080
UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp... 39 0.080
UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Stau... 39 0.080
UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter carbino... 39 0.080
UniRef50_Q4V9C6 Cluster: Zgc:113842; n=6; Clupeocephala|Rep: Zgc... 38 0.11
UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis ala... 38 0.11
UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter xyla... 38 0.11
UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera ara... 38 0.11
UniRef50_Q7PPS2 Cluster: ENSANGP00000020540; n=1; Anopheles gamb... 38 0.11
UniRef50_Q17BU1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 38 0.11
UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. ... 38 0.11
UniRef50_Q9YWP6 Cluster: Vp8; n=1; Kadipiro virus|Rep: Vp8 - Kad... 38 0.14
UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1; Candi... 38 0.14
UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas a... 38 0.14
UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio bacte... 38 0.14
UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus acidi... 38 0.18
UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole geno... 38 0.18
UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein Sta... 38 0.18
UniRef50_UPI00015B62EF Cluster: PREDICTED: similar to conserved ... 37 0.24
UniRef50_A0NFW6 Cluster: ENSANGP00000031506; n=1; Anopheles gamb... 37 0.24
UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus h... 37 0.24
UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep: ... 37 0.24
UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome s... 37 0.32
UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila melanogaster|... 37 0.32
UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding prote... 36 0.43
UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep: ... 36 0.43
UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep: Rib... 36 0.43
UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3; ... 36 0.43
UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio "In... 36 0.56
UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome sh... 36 0.56
UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris... 36 0.74
UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum... 36 0.74
UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter rub... 35 0.98
UniRef50_Q7Z6F6 Cluster: Interferon-inducible double-stranded RN... 35 0.98
UniRef50_P19525 Cluster: Interferon-induced, double-stranded RNA... 35 0.98
UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whol... 35 1.3
UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium phyt... 35 1.3
UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usita... 35 1.3
UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:... 35 1.3
UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep: Ri... 35 1.3
UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;... 35 1.3
UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON DNA-bi... 34 1.7
UniRef50_Q4SXU5 Cluster: Chromosome undetermined SCAF12326, whol... 34 2.3
UniRef50_Q6R257 Cluster: DsRNA-binding protein; n=1; Solanum lyc... 34 2.3
UniRef50_Q94239 Cluster: Putative uncharacterized protein; n=2; ... 34 2.3
UniRef50_UPI0000EB3B4C Cluster: Double-stranded RNA-specific edi... 33 3.0
UniRef50_Q9LJH6 Cluster: Genomic DNA, chromosome 3, P1 clone: MA... 33 3.0
UniRef50_A5BPJ2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4; D... 33 3.0
UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14; Gammaproteobacter... 33 3.0
UniRef50_UPI0000E4A971 Cluster: PREDICTED: similar to dsRNA aden... 33 4.0
UniRef50_A1KR30 Cluster: Double stranded RNA activated protein k... 33 4.0
UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:... 33 4.0
UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep: Ri... 33 4.0
UniRef50_UPI0000D564B2 Cluster: PREDICTED: similar to CG17686-PC... 33 5.2
UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter ... 33 5.2
UniRef50_Q8H1D4 Cluster: Putative uncharacterized protein At3g62... 33 5.2
UniRef50_Q53L62 Cluster: Helix-loop-helix DNA-binding domain, pu... 33 5.2
UniRef50_UPI0000D55F94 Cluster: PREDICTED: similar to cubilin; n... 32 6.9
UniRef50_Q2TPU0 Cluster: VP11; n=2; Liao ning virus|Rep: VP11 - ... 32 6.9
UniRef50_Q4SKQ4 Cluster: Chromosome undetermined SCAF14565, whol... 32 9.2
UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta proteobact... 32 9.2
UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas w... 32 9.2
UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovley... 32 9.2
>UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 395
Score = 77.4 bits (182), Expect = 2e-13
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Frame = +3
Query: 75 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRC----KALGESVSASARSKREA 242
MKTP+++LQE++ + G P YE V G H+ TF FR K + + RSK+EA
Sbjct: 113 MKTPVSILQEILSRRGITPGYELVQIEGAIHEPTFRFRVSFKEKDTPFTAMGAGRSKKEA 172
Query: 243 KQEAARAML--LCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDS--RSYVAL 410
K AARA++ L + + AT P+ + S G+C+ D + + L
Sbjct: 173 KHAAARALIDKLMGAQLPEAASSATATSAADPTAAG-SGGDCNTAVGDPDDKIVGNPIGL 231
Query: 411 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
L+ELC + + P YA + G H RLF++ +I
Sbjct: 232 LQELCMQRRWPPPTYATETEMGLPHERLFTIACTI 266
>UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious
CG6866-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PB, isoform B -
Apis mellifera
Length = 308
Score = 76.6 bits (180), Expect = 3e-13
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
KTP+++LQEMM+K P YE + G H F ++ K S RSK++AK EAA
Sbjct: 3 KTPVSILQEMMVKNKITPNYELIHDGGGSHMNVFAYQVKCDDLIASGIGRSKKDAKHEAA 62
Query: 258 RAMLLCLST-IGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 434
+AML ++T G+ P + + E S P + + V L++LC E
Sbjct: 63 KAMLETIATKRGYLQLPASPAQSPIRTPLLPIIPEISR-IPPDIPFVNAVGALQDLCVEN 121
Query: 435 KLPGVEYALVADTGPAHMRLFSVRASI 515
L +Y ++D GP H ++F++ +
Sbjct: 122 NLQDPKYQQISDVGPPHAKIFTIECEV 148
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 87 ITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARA 263
+ LQ++ ++ Q P+Y+ ++ GP H F C+ A++K++AKQEAA+
Sbjct: 111 VGALQDLCVENNLQDPKYQQISDVGPPHAKIFTIECEVATLKEIGVAKTKKQAKQEAAKK 170
Query: 264 ML 269
ML
Sbjct: 171 ML 172
>UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:
CG6866-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 465
Score = 70.5 bits (165), Expect = 2e-11
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Frame = +3
Query: 75 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRC----KALGESVSASARSKREA 242
MKTP+++LQE++ + G P YE V G H+ TF FR K + + RSK+EA
Sbjct: 133 MKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEA 192
Query: 243 KQEAARAMLLCLSTIGHRVPP-------PFATEFT-QPSHSNQSAGECSEGKAPTVDSRS 398
K AARA++ L IG ++P P T T S + +A G A +
Sbjct: 193 KHAAARALIDKL--IGAQLPESPSSSAGPSVTGLTVAGSGGDGNANATGGGDASDKTVGN 250
Query: 399 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
+ L+E+C + + P Y + G H RLF++ SI
Sbjct: 251 PIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSI 289
>UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE14437p - Nasonia vitripennis
Length = 394
Score = 66.1 bits (154), Expect = 5e-10
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFR---CKALGESVSA--SARSKREA 242
KTP++VLQE++ + G P+YE V G H+ TF +R + VSA + RSK+EA
Sbjct: 76 KTPVSVLQELLSRRGTTPKYELVQIEGAIHEPTFRYRVTVADVVDPIVSAMGTGRSKKEA 135
Query: 243 KQEAARAM---LLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALL 413
K AA+A+ L+ ++T P P + P N + G+ V++ + L
Sbjct: 136 KHAAAKAVLDKLIGVNTENAEAPIPNSI----PDSQNIQEIQSGYGEEKVVNNP--IGSL 189
Query: 414 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
+E+C P +Y++ + G H R F++ SI
Sbjct: 190 QEMCMSRHWPPPKYSMEGEEGLPHERQFTIVCSI 223
>UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious
CG6866-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PA, isoform A -
Apis mellifera
Length = 338
Score = 63.7 bits (148), Expect = 2e-09
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFR---CKALGESVSA--SARSKREA 242
KTP+++LQE++ + G P+YE + G H+ F +R + VSA + +SK+EA
Sbjct: 69 KTPVSILQELLSRRGTTPKYELIQVEGAIHEPIFRYRVTVADVVDPIVSAMGTGKSKKEA 128
Query: 243 KQEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKEL 422
K AARA+L L + P S + Q E K T + + L+E+
Sbjct: 129 KHAAARAVLDKLCRLNSESPDSPLPNSIPDSENLQELSGYGEEKIIT----NPIGALQEM 184
Query: 423 CEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
C P +Y + + G H R F++ S+
Sbjct: 185 CMSRHWPPPKYTIENEEGLPHERQFTIVCSV 215
>UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6866-PB, isoform B - Tribolium castaneum
Length = 384
Score = 60.9 bits (141), Expect = 2e-08
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = +3
Query: 51 KL*KSNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASAR 227
KL ++ KTP++VLQE++ + G P+YE V G H+ F +R + V + + R
Sbjct: 55 KLEMASLPTKTPVSVLQELLSRRGATPKYELVQIEGAIHEPIFRYRVFINNDLVATGTGR 114
Query: 228 SKREAKQEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR---S 398
SK++AK AA+ +L L +G + P E S+ A + + D + +
Sbjct: 115 SKKDAKHAAAKNLLDVL--VGKQSP-----EQANASNGTPGANDITAQVVSPFDDKVMGN 167
Query: 399 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
+ L+E+C + P Y + + G H R F++ +
Sbjct: 168 PIGWLQEMCMSRRWPPPSYEMEHEEGLPHERQFTIACQV 206
>UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aedes
aegypti|Rep: RNA binding protein, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 289
Score = 56.4 bits (130), Expect = 4e-07
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
KTPITVLQE++ + G P+Y+ + H TF +R + + +SK+EAKQ AA
Sbjct: 139 KTPITVLQEVLTRRGIYPQYDFIQPDAAVHDGTFRYRVSYQDKEAMGTGKSKKEAKQAAA 198
Query: 258 RAML 269
++++
Sbjct: 199 KSLI 202
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKRE 239
KSN K K P+++L E++ + G P+Y+ + + G H+ TF +R + +SK+E
Sbjct: 55 KSNTK-KMPVSLLYELLSRRGITPQYDLLPREGAAHEQTFSYRVSYPDGDAIGTGQSKKE 113
Query: 240 AKQEAARAML 269
AK AA+A++
Sbjct: 114 AKHAAAKALI 123
>UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3;
Clupeocephala|Rep: TAR (HIV) RNA binding protein 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 346
Score = 55.6 bits (128), Expect = 7e-07
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +3
Query: 69 NKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQ 248
N KTPI++LQE ++G+ P Y+ + G HQ F FR + + SK+ AK
Sbjct: 26 NPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVSVGDINCTGHGPSKKAAKH 85
Query: 249 EAARAMLLCLSTIGHRVPPPFATEFTQPSHSN-QSAGECSEGKAPTVDSRSY-----VAL 410
+AA A L L G + + GEC + + + S V
Sbjct: 86 KAAEAALKMLK--GGMLGGIGGNGMEGDGFVGIEMEGECPQSEMKSSSSTQQAECNPVGA 143
Query: 411 LKELCEE--YKLPGVEYALVADTGPAHMRLFSVRASI 515
L+EL + ++LP EY + ++GPAH + F++ +
Sbjct: 144 LQELVVQKGWRLP--EYTVTQESGPAHRKEFTMTCRV 178
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 260
P+ LQE++++ G ++PEY +SGP H+ F C+ S SK+ AK+ AA
Sbjct: 140 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAA 199
Query: 261 AMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKA 377
ML + + + E + + Q G GK+
Sbjct: 200 KMLSRIHDVPVDMRSSHEAEAEDDTFNMQIGGRLEGGKS 238
>UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC53736 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 54.4 bits (125), Expect = 2e-06
Identities = 43/146 (29%), Positives = 61/146 (41%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
KTP+++LQE+ K G P Y+ + Q G HQ F RC A + SK+ AKQ AA
Sbjct: 5 KTPVSILQELCAKKGVTPVYDTIGQEGASHQPKFTIRCTAGDVVGNGQGPSKKVAKQSAA 64
Query: 258 RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYK 437
+L L VP + S + GE E C ++
Sbjct: 65 EDVLQQLDI---EVPAVETEQDEGRSLKDNPVGELQE---------------LVTCMGWR 106
Query: 438 LPGVEYALVADTGPAHMRLFSVRASI 515
P EY + ++GP H R F + S+
Sbjct: 107 KP--EYEALEESGPPHNRRFVISVSV 130
Score = 41.5 bits (93), Expect = 0.011
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 260
P+ LQE++ +G + PEYE + +SGP H F +SKR AK+ AA
Sbjct: 92 PVGELQELVTCMGWRKPEYEALEESGPPHNRRFVISVSVDKYKEQGVDQSKRLAKRAAAS 151
Query: 261 AMLLCLSTIGHRVPP 305
AML L + + P
Sbjct: 152 AMLEVLRKLPADINP 166
>UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=32; Theria|Rep: Double-stranded
RNA-specific adenosine deaminase - Homo sapiens (Human)
Length = 1226
Score = 53.2 bits (122), Expect = 3e-06
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQ 248
++K PI+ L E Q E+ + QSGP H+ F+F+ G E A A SK+ AKQ
Sbjct: 500 QLKNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQ 559
Query: 249 EAA-RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSY------VA 407
+AA +AM + L + +E + + + + + +E + PT + S+ V
Sbjct: 560 DAAMKAMTILLEEA--KAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVT 617
Query: 408 LLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
L E C E+ L++ GPAH F ++G
Sbjct: 618 TLLE-CMHKLGNSCEFRLLSKEGPAHEPKFQYCVAVG 653
Score = 52.4 bits (120), Expect = 6e-06
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 251
K+P+T L E M KLG E+ +++ GP H+ F++ C A+G S SA SK+ AKQ
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQY-CVAVGAQTFPSVSAPSKKVAKQM 671
Query: 252 AARAMLLCL------STIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALL 413
AA + L S P +E S G+ + + V L
Sbjct: 672 AAEEAMKALHGEATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELVRYLNTNPVGGL 731
Query: 414 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
E + E+ LV +GP H F +A +G
Sbjct: 732 LEYARSHGF-AAEFKLVDQSGPPHEPKFVYQAKVG 765
Score = 41.9 bits (94), Expect = 0.009
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 260
P+ L E G E++ V QSGP H+ F ++ K G A A SK++ KQEAA
Sbjct: 727 PVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAAD 786
Query: 261 AMLLCL 278
A L L
Sbjct: 787 AALRVL 792
>UniRef50_UPI0001560C6B Cluster: PREDICTED: similar to adenosine
deaminase, RNA-specific; n=1; Equus caballus|Rep:
PREDICTED: similar to adenosine deaminase, RNA-specific -
Equus caballus
Length = 1145
Score = 52.0 bits (119), Expect = 8e-06
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 251
K P+T L E + KLG E+ +++ GP H F++ C A+G +ASA SK+ AKQ
Sbjct: 558 KNPVTTLLECVHKLGSSCEFRLLSREGPAHDPKFQY-CVAMGTHTFPTASAPSKKVAKQM 616
Query: 252 AARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR--SYVALLKE-- 419
AA + L H QP +N + + E P R V L
Sbjct: 617 AAEEAMKAL----HEEAANSTPSDNQPGSTNTESLDNLESVIPNKVRRIGELVRYLNTNP 672
Query: 420 ---LCEEYKLPG--VEYALVADTGPAHMRLFSVRASIG 518
L E + G E+ LV +GP H F +A +G
Sbjct: 673 VGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVG 710
Score = 48.0 bits (109), Expect = 1e-04
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQ 248
++K PI+ L E Q E+ + QSGP H+ F+F+ G E A A SK+ AKQ
Sbjct: 445 QLKNPISGLLEYAQFASQTCEFNLIEQSGPPHEPRFKFQVVISGREFPPAEAGSKKVAKQ 504
Query: 249 EAA-RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDS----RSYVALL 413
+AA +AM + L + + + S+ P+ S ++ V L
Sbjct: 505 DAAMKAMTILLEEAKAKDSGRSEESYYYSTERESEKTAESQPTTPSATSFFSGKNPVTTL 564
Query: 414 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
E C E+ L++ GPAH F ++G
Sbjct: 565 LE-CVHKLGSSCEFRLLSREGPAHDPKFQYCVAMG 598
Score = 41.9 bits (94), Expect = 0.009
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 260
P+ L E G E++ V QSGP H+ F ++ K G A A SK++ KQEAA
Sbjct: 672 PVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAAD 731
Query: 261 AMLLCL 278
A L L
Sbjct: 732 AALRVL 737
>UniRef50_Q9I8Y6 Cluster: Double-stranded RNA adenosine deaminase
DRADA; n=2; Takifugu rubripes|Rep: Double-stranded RNA
adenosine deaminase DRADA - Fugu rubripes (Japanese
pufferfish) (Takifugu rubripes)
Length = 1194
Score = 51.2 bits (117), Expect = 1e-05
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQ 248
K+K P++ L E LGQ E+ + QSGP H F + G A A SK+ AK+
Sbjct: 468 KLKNPVSGLMEYAQFLGQNCEFLLLDQSGPSHDPRFRMQVMLNGRQFPVAEASSKKVAKK 527
Query: 249 EAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKA-PTVDSRSY------VA 407
+AA A L L + +++ + NQ G+ ++ + P + SRS V+
Sbjct: 528 DAAAATLHVLI---EEMEGGTSSKDKNNAAINQVTGQLTDTEGPPQLLSRSLPGGKNPVS 584
Query: 408 LLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
+L E + P +E+ + GP H F R +G
Sbjct: 585 VLMEYGQHSGNP-IEFIMTGQAGPPHDTRFMYRVKVG 620
Score = 41.5 bits (93), Expect = 0.011
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 251
K P++VL E G E+ Q+GP H F +R K +GE++ ASA SK+ A+Q
Sbjct: 580 KNPVSVLMEYGQHSGNPIEFIMTGQAGPPHDTRFMYRVK-VGENLFSEASAPSKKAARQL 638
Query: 252 AA 257
AA
Sbjct: 639 AA 640
Score = 38.3 bits (85), Expect = 0.11
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREA 242
N+ ++ L E G E V QSGP H+ F ++ K G A A +K++
Sbjct: 701 NHLNNNAVSGLLEYAKARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPAVCASNKKQG 760
Query: 243 KQEAARAMLLCL 278
KQEAA A L L
Sbjct: 761 KQEAADAALRVL 772
>UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19;
Euteleostomi|Rep: TAR RNA-binding protein 2 - Homo
sapiens (Human)
Length = 366
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +3
Query: 69 NKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQ 248
N KTPI++LQE ++G+ P Y+ + G HQ F FR S + SK+ AK
Sbjct: 26 NPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKH 85
Query: 249 EAARAML 269
+AA L
Sbjct: 86 KAAEVAL 92
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 260
P+ LQE++++ G ++PEY +SGP H+ F C+ S SK+ AK+ AA
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAA 219
Query: 261 AMLLCLSTI 287
MLL + T+
Sbjct: 220 KMLLRVHTV 228
>UniRef50_O75569 Cluster: Interferon-inducible double stranded
RNA-dependent protein kinase activator A; n=23;
Euteleostomi|Rep: Interferon-inducible double stranded
RNA-dependent protein kinase activator A - Homo sapiens
(Human)
Length = 313
Score = 49.6 bits (113), Expect = 4e-05
Identities = 45/144 (31%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
KTPI VL E MK IP YEC H TF FR + + SK+ AK AA
Sbjct: 33 KTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEGTSKKLAKHRAA 92
Query: 258 RAMLLCL---STIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCE 428
A + L ++I VP P P S Q + + + L+EL
Sbjct: 93 EAAINILKANASICFAVPDPL-----MPDPSKQPKNQLNP-----------IGSLQELAI 136
Query: 429 EYKLPGVEYALVADTGPAHMRLFS 500
+ EY L + GPAH R ++
Sbjct: 137 HHGWRLPEYTLSQEGGPAHKREYT 160
Score = 39.9 bits (89), Expect = 0.035
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKR 236
K PI LQE+ + G ++PEY + GP H+ + C+ + SK+
Sbjct: 119 KQPKNQLNPIGSLQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKK 178
Query: 237 EAKQEAARAMLLCLSTI 287
+AK+ AA L S I
Sbjct: 179 QAKRNAAEKFLAKFSNI 195
>UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter
oxydans|Rep: Ribonuclease III - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 174
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 254
K P T+LQE M+ G +P YE ++ GP H F +G + + A SKR A+ A
Sbjct: 101 KEPKTLLQEYMLSQGLPLPHYELLSSDGPSHAPVFRVSVTTMGHTGTGEAGSKRLAESAA 160
Query: 255 ARAML 269
A A+L
Sbjct: 161 ATALL 165
>UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2;
Chloroflexus|Rep: Ribonuclease III, bacterial -
Chloroflexus aurantiacus J-10-fl
Length = 244
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 PITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 260
P T LQE+M + Q+P+Y + GP+HQ + G + S SK+EAK+ AAR
Sbjct: 162 PTTRLQELMQARFKQLPDYSIEEERGPEHQREYVMAVTVAGRKFTGSGSSKKEAKRAAAR 221
Query: 261 AML 269
L
Sbjct: 222 KAL 224
>UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanthus
DK 1622|Rep: Ribonuclease III - Myxococcus xanthus
(strain DK 1622)
Length = 260
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASA--RSKREAKQEAAR 260
T+LQEM +L P Y V++SGP+H FE LGE+ A A RSK+EA+Q AA+
Sbjct: 175 TLLQEMAHERLKLQPRYRVVSESGPEHSKVFEVEL-MLGETAFARATGRSKKEAEQSAAQ 233
Query: 261 AML 269
A L
Sbjct: 234 ATL 236
>UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=8; Eutheria|Rep: Double-stranded
RNA-specific adenosine deaminase - Mus musculus (Mouse)
Length = 1178
Score = 47.6 bits (108), Expect = 2e-04
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQ 248
++K P++ L E Q ++ + QSGP H+ F+F+ G E A A SK+ AKQ
Sbjct: 453 QLKNPVSGLLEYAQFTSQTCDFNLIEQSGPSHEPRFKFQVVINGREFPPAEAGSKKVAKQ 512
Query: 249 EAA-RAMLLCLSTIGHR---VPPPFA-TEFTQPSHSNQSAGECSEGKAPTVDSRSYVALL 413
+AA +AM + L + P + + S A S +S V L
Sbjct: 513 DAAVKAMAILLREAKAKDSGQPEDLSHCPMEEDSEKPAEAQAPSSSATSLFSGKSPVTTL 572
Query: 414 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
E C E+ L++ GPAH F ++G
Sbjct: 573 LE-CMHKLGNSCEFRLLSKEGPAHDPKFQYCVAVG 606
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 251
K+P+T L E M KLG E+ +++ GP H F++ C A+G SA SK+ AKQ
Sbjct: 566 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHDPKFQY-CVAVGAQTFPPVSAPSKKVAKQM 624
Query: 252 AARAMLLCL 278
AA + L
Sbjct: 625 AAEEAMKAL 633
Score = 40.3 bits (90), Expect = 0.026
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 260
P+ L E G E++ + QSGP H+ F ++ K G A A SK++ KQ+AA
Sbjct: 676 PVGGLLEYARSHGFAAEFKLIDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQDAAD 735
Query: 261 AMLLCL 278
A L L
Sbjct: 736 AALRVL 741
>UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3; Xenopus|Rep:
DsRNA adenosine deaminase - Xenopus laevis (African
clawed frog)
Length = 1270
Score = 47.2 bits (107), Expect = 2e-04
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEA 254
K PI++L E K G + E++ V+Q GP H F + K ++ A +K+ AK A
Sbjct: 678 KNPISLLMEHGQKSGNMCEFQLVSQEGPPHDPKFTYTVKIGNQTFPPVVANNKKMAKHLA 737
Query: 255 ARAMLLCLSTIGHRVPPPFATEFTQ-----PSHSNQSAGECSEGKAPTV-DSRSYVAL-- 410
A A + L G P F + P+ SA + ++ +V D Y+
Sbjct: 738 AEAAVRELLGEGALQPEKFDPSYNANPTEFPAIPELSAEDLKMAQSSSVGDLIKYLNANP 797
Query: 411 LKELCEEYKLPG--VEYALVADTGPAHMRLFSVRASIG 518
+ L E + G E+ +V TGP H F +A +G
Sbjct: 798 VSGLLEYARAKGFAAEFKMVNQTGPPHDPKFVFQAKVG 835
Score = 41.9 bits (94), Expect = 0.009
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 260
P++ L E G E++ V Q+GP H F F+ K G A SA +K++AK EAA
Sbjct: 797 PVSGLLEYARAKGFAAEFKMVNQTGPPHDPKFVFQAKVGGRWFPAVSASNKKQAKAEAAD 856
Query: 261 AMLLCL 278
A L L
Sbjct: 857 AALRVL 862
Score = 38.7 bits (86), Expect = 0.080
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 254
K P++ L E Q ++ + QSGP H F+ + G A A SK+ AK++A
Sbjct: 573 KNPVSGLLEFTHYCSQQCDFALLNQSGPSHDPRFKIQAVIDGRRFPVAEANSKKTAKKDA 632
Query: 255 AR-AMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEE 431
A A+ + L E TQ + ++ P +++ ++LL E ++
Sbjct: 633 AALALRILLREEQGGTEDEVMAENTQVPEVKEEQNVPAQPSFPC--NKNPISLLMEHGQK 690
Query: 432 YKLPGVEYALVADTGPAHMRLFSVRASIG 518
E+ LV+ GP H F+ IG
Sbjct: 691 -SGNMCEFQLVSQEGPPHDPKFTYTVKIG 718
>UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia
californica|Rep: Neuron-specific staufen - Aplysia
californica (California sea hare)
Length = 950
Score = 47.2 bits (107), Expect = 2e-04
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 245
++ +K+ I+++ E+ ++ + ++E + ++GP H F RC SK+ +K
Sbjct: 573 DDSLKSEISLVHEIALRRNMVVQFEVIRETGPPHMKNFLTRCTVADMVTEGEGNSKKTSK 632
Query: 246 QEAARAMLLCLSTIGHRVPPPF-----ATEFTQPSHSNQSAGECSEGKA-PTVD-SRSYV 404
++AA ML L + P F + + + N E + KA P + +
Sbjct: 633 KKAAELMLEELRKLPPLATPAFPRPKSKIQMNKKKNRNLIKSELQQQKADPNYGVGINPI 692
Query: 405 ALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
+ L ++ + K Y LV + G R F V+ +
Sbjct: 693 SRLIQIMQAQKKKEPVYTLVTERGLPRRREFIVQVEV 729
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREA 242
+N K KTP+ ++ E+ +Y V + GP H+ TF + K E SAS S ++A
Sbjct: 338 ANTKEKTPMCLINELARFNKMSHQYTLVDEQGPAHKKTFYVKLKLGDEEYSASGESIKKA 397
Query: 243 KQEAARAMLLCLSTIGHRVPPP 308
Q AA A+ L + H P P
Sbjct: 398 -QHAAAAIALVETKCPHPPPKP 418
>UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27;
Epsilonproteobacteria|Rep: Ribonuclease 3 - Helicobacter
hepaticus
Length = 240
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 TVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAAR 260
T LQE+ G+IP Y +++SGP H+ +FE G E AS SK+EA+Q++A+
Sbjct: 163 TALQEITQAFYGEIPTYTLISESGPDHKKSFEIALSVQGKEYARASGNSKKEAQQKSAQ 221
>UniRef50_Q56UE8 Cluster: Putative double strand RNA binding
protein; n=1; Lymnaea stagnalis|Rep: Putative double
strand RNA binding protein - Lymnaea stagnalis (Great
pond snail)
Length = 141
Score = 46.0 bits (104), Expect = 5e-04
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQE 251
KTPI+ LQE K P+Y+ +A G H+ TF R +G++ A+ + SK++AK
Sbjct: 7 KTPISYLQEYATKHAITPQYDLIANEGAVHEPTFIMRV-TVGDNAVATGKGSSKKKAKHA 65
Query: 252 AARAMLLCL--STIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELC 425
AA+ L L T G T T P+ + + D + + L+E
Sbjct: 66 AAQNALNILLGVTNGQEEIKEEPTVSTAPTPNKEE------------DVGNPIGELQEFT 113
Query: 426 EEYKLPGVEYALVADTGPAHMRLF 497
++ L Y V + GP H R F
Sbjct: 114 QKKLLKPPIYEFVTEQGPPHAREF 137
>UniRef50_A7S1J6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 118
Score = 46.0 bits (104), Expect = 5e-04
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
KTPI+ L E+ +++G ++E V+ G H TF CKA + + SK++AKQ AA
Sbjct: 33 KTPISELLELAVQMGIKVDFEQVSAVGMPHNQTFTINCKAGDFTGIGTGPSKKKAKQNAA 92
Query: 258 RAML 269
A L
Sbjct: 93 SATL 96
>UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease III - Ruthia magnifica
subsp. Calyptogena magnifica
Length = 221
Score = 45.6 bits (103), Expect = 7e-04
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRC--KALGESVSASARSKR 236
++ +K P T LQE + K G + P+YE G H A F C K VS SA+S +
Sbjct: 145 DDSLKDPKTQLQEYLQKYGNVLPKYELTDTIGKDHNAIFTINCLLKDQNLQVSQSAKSIK 204
Query: 237 EAKQEAARAML 269
+A+Q A+ +L
Sbjct: 205 KAEQSCAQTLL 215
>UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28;
Alphaproteobacteria|Rep: Ribonuclease 3 - Silicibacter
pomeroyi
Length = 225
Score = 45.6 bits (103), Expect = 7e-04
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCK-ALGESVSASARSKREAKQEAARA 263
T LQE GQ P YE V +SGP H F + A G A+A +KR+A+Q AAR
Sbjct: 160 TALQEWAQARGQTPPRYELVKRSGPDHAPVFTILAELADGRRAEATAGAKRQAEQAAARK 219
Query: 264 ML 269
+L
Sbjct: 220 LL 221
>UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Ribonuclease III - Hyphomonas
neptunium (strain ATCC 15444)
Length = 234
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 254
K P T+LQE G +P+Y +SGP H +E + +A+ SKREA++ A
Sbjct: 163 KDPKTLLQEWAQGQGHPLPDYVVTGRSGPDHAPQYEVEVRLAVGKATATGPSKREAERHA 222
Query: 255 ARAMLLCLS 281
A ML L+
Sbjct: 223 AALMLRTLT 231
>UniRef50_A7S1J7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 69
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 96 LQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAML 269
LQE+ +K G Q PEY+ V GP H FE + + RSK++AK+ AA AML
Sbjct: 11 LQEVTVKKGWQYPEYKDVKAKGPPHMRQFEMVVTVGTLTATGKGRSKKDAKRSAANAML 69
>UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, RNA
binding protein, homolog 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to staufen, RNA
binding protein, homolog 2 - Tribolium castaneum
Length = 480
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKR 236
K + +K+PIT + E E+ +++SG HQ F CK LG+ V+ RSK+
Sbjct: 224 KLKDDLKSPITRVHEAAQLNNLALEFNVISESGKPHQRNFVTECK-LGDYVTEGEGRSKK 282
Query: 237 EAKQEAARAML 269
E+K+ AA ML
Sbjct: 283 ESKRVAAEKML 293
Score = 33.9 bits (74), Expect = 2.3
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYEC----VAQSGPQHQATFEFRCKALGESVSASARSK 233
NN KTP + + +L Q E EC +++ GP H F+ E S S
Sbjct: 8 NNVTKTPEKNIVATIYELAQFNEIECSYTLISEEGPPHAKIFKVSLHLGDELYEGSGSSL 67
Query: 234 REAKQEAARAML 269
++A+Q AA L
Sbjct: 68 KKAQQAAATLAL 79
>UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep:
Ribonuclease III - Thermosinus carboxydivorans Nor1
Length = 243
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARA 263
TVLQE++ + G+ YE VA+ GP H TFE + + A S ++K+EA+Q AA+
Sbjct: 172 TVLQEVVQQAGECKISYEVVAEYGPDHNKTFEVSVLVNHQHLGAGSGKNKKEAEQNAAKE 231
Query: 264 ML 269
L
Sbjct: 232 AL 233
>UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter
nodosus VCS1703A|Rep: Ribonuclease III - Dichelobacter
nodosus (strain VCS1703A)
Length = 233
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 75 MKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQE 251
+K P T LQE + +P YE V + GP+H F K+ +A+A S+++A+Q
Sbjct: 156 LKDPKTRLQEYLQSRDLPLPVYELVEEKGPEHAKIFTISAKSERFCTTATASSRKKAEQA 215
Query: 252 AARAMLLC 275
AA + C
Sbjct: 216 AAELLFSC 223
>UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 423
Score = 44.0 bits (99), Expect = 0.002
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
K+ I+ + E+ ++ + +++ + +GP H F+ + K++AK+EAA
Sbjct: 237 KSEISQVYEIATRMKMMVDFQDMENAGPAHMKKFKIKATVGPYMTEGEGNRKKDAKKEAA 296
Query: 258 RAMLLCLSTIGH-RVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 434
ML L + V P ++ + N + PT++S +++L ++ +
Sbjct: 297 VRMLAELKKLPEPPVDPEKKKKYQRHGLYNAKKVKPKSDIDPTLNS---ISILGQILQRR 353
Query: 435 KLPGVEYALVADTGPAHMRLFSVRASIG 518
P Y+LV + G + F++R +G
Sbjct: 354 HDPAPVYSLVEERGHMMKKEFTLRVKVG 381
Score = 36.7 bits (81), Expect = 0.32
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGE 206
KTPI+++ E+ PEY + ++GP H+ TF+ + K LG+
Sbjct: 4 KTPISLMNELAKANNLNPEYNVIEETGPAHKKTFKVQLK-LGD 45
Score = 33.1 bits (72), Expect = 4.0
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 384 VDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
+ ++ ++L+ EL + L EY ++ +TGPAH + F V+ +G
Sbjct: 1 MSQKTPISLMNELAKANNL-NPEYNVIEETGPAHKKTFKVQLKLG 44
>UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium
nucleatum|Rep: Ribonuclease 3 - Fusobacterium nucleatum
subsp. nucleatum
Length = 234
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 90 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 266
++LQE + K +P YE VA+ GP H FE + A AR+K++A+Q +A+A+
Sbjct: 163 SILQEYVQKEFKTVPTYELVAERGPDHMKEFEIQVIVGNYKEKAVARNKKKAEQLSAKAL 222
Query: 267 LLCL 278
+ L
Sbjct: 223 CIKL 226
>UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to staufen -
Nasonia vitripennis
Length = 587
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREA 242
N ++K+P++++ E +K G ++ V+++G H TF RC +G+ V+ SK+ +
Sbjct: 185 NAELKSPVSLVHETALKRGLSVSFDVVSETGKPHIRTFMTRC-TVGDKVTLGEGSSKKVS 243
Query: 243 KQEAARAML 269
K+ AA ML
Sbjct: 244 KKRAAELML 252
>UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma
proteobacterium HTCC2207|Rep: Ribonuclease III - gamma
proteobacterium HTCC2207
Length = 225
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 75 MKTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCK--ALGESVSASARSKREAK 245
+K T LQE + G+ +PEY V G H F CK A+ E+ A+A S+R+A+
Sbjct: 152 VKDAKTALQEWLQARGKPLPEYRVVKTEGEDHSRLFTMSCKIDAVDETAEATASSRRKAE 211
Query: 246 QEAARAMLLCLSTI 287
Q A ++ L I
Sbjct: 212 QLVAEKLVKKLENI 225
>UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribonuclease III -
Neorickettsia sennetsu (strain Miyayama)
Length = 222
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLGQIPE-YECVAQSGPQHQATFEFRCKALGESVSASARSKR 236
+S++ P + LQE++ G P Y + +SGP H FE + G+ A+ +SK+
Sbjct: 144 QSDSIEPNPKSTLQELLQAKGMKPPIYNVINRSGPAHLPIFEIEIRVDGKKRRATGKSKK 203
Query: 237 EAKQEAARAML 269
++ AAR ML
Sbjct: 204 LGEENAARMML 214
>UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3;
Cystobacterineae|Rep: Ribonuclease III -
Anaeromyxobacter sp. Fw109-5
Length = 377
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAAR 260
T LQE+ ++ P Y V + GP H TFE + GE V + RSK++A+Q AA+
Sbjct: 177 TQLQELAQSRVRATPRYRVVGEHGPDHSKTFEVETELRGEVVGRGTGRSKKDAEQAAAK 235
>UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3;
Alphaproteobacteria|Rep: Ribonuclease III -
Methylobacterium extorquens PA1
Length = 256
Score = 42.7 bits (96), Expect = 0.005
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 263
+ LQE M IP YE V +SGP H F + G E SKR A+QEAARA
Sbjct: 179 SALQEWAMARSLAIPVYEVVERSGPDHAPVFRIAARVEGIEPGYGEGASKRVAEQEAARA 238
Query: 264 ML 269
+L
Sbjct: 239 VL 240
>UniRef50_UPI0000DB79F1 Cluster: PREDICTED: similar to CG8273-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG8273-PA
- Apis mellifera
Length = 485
Score = 42.3 bits (95), Expect = 0.006
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 78 KTPITVLQEMMMK--LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARS--KREAK 245
K P+++L E K LG P YE + GP H+ F F+ K G S S K++AK
Sbjct: 405 KHPVSLLGEYCSKRKLGA-PVYELCFECGPDHRKNFLFKVKVNGIEYKPSVASPNKKQAK 463
Query: 246 QEAARAMLLCLSTIG 290
EAA+ +CL T+G
Sbjct: 464 AEAAQ---ICLQTLG 475
>UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n=9;
Euteleostomi|Rep: Double-stranded RNA-specific editase -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1382
Score = 42.3 bits (95), Expect = 0.006
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 251
K P++VL E + G ++ Q GP H F FR K +GE + ASA SK+ A+Q
Sbjct: 742 KNPVSVLMEHSQRSGHPIQFIKTGQEGPSHDPRFMFRVK-VGERLFQEASAPSKKAARQL 800
Query: 252 AARAMLLCLSTIG--H-RVPP----PFATEFTQP------------SHSNQSAGECSEGK 374
AA + L G H PP P +QP + Q+A E G
Sbjct: 801 AAEEAVKELMGDGLLHLNKPPSSFCPMGDSESQPMFPACPSLPPLTAAELQAAHEAGVGD 860
Query: 375 APTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
+ + V+ L EL + + LV +GP+H F+ +A +G
Sbjct: 861 LINHLNNNAVSGLLELRPVLEASLLSIRLVGQSGPSHEPKFTYQAKLG 908
Score = 37.5 bits (83), Expect = 0.18
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQ 248
+ K P++ L E LG E+ + QSGP H F + G +A +K+ AK+
Sbjct: 625 RSKNPVSGLMEFAQHLGYTCEFLLLEQSGPSHDPRFRMQVMLDGRRFPAAEGSNKKVAKK 684
Query: 249 EAARAMLLCL 278
+AA L L
Sbjct: 685 DAAAITLKIL 694
Score = 35.5 bits (78), Expect = 0.74
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 144 VAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARAMLLCL 278
V QSGP H+ F ++ K G A A +K++ KQEAA A L L
Sbjct: 890 VGQSGPSHEPKFTYQAKLGGRWFPAVCASNKKQGKQEAADAALRVL 935
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 90 TVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 266
++LQE+ G+ P YE + ++GP H TF R A S ++K+ A+Q+AA
Sbjct: 162 SLLQELTQATDGKAPTYEIIDETGPDHDKTFHCRVSAGDIQAEGSGKNKKTAQQDAAHKA 221
Query: 267 L 269
L
Sbjct: 222 L 222
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 390 SRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
+R+Y +LL+EL + Y ++ +TGP H + F R S G
Sbjct: 157 NRNYKSLLQELTQATDGKAPTYEIIDETGPDHDKTFHCRVSAG 199
>UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen -
Aedes aegypti (Yellowfever mosquito)
Length = 1103
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 245
N+ +K+PI+++ EM +K ++E + GP H F CK K+ +K
Sbjct: 612 NSDLKSPISLVHEMALKRKLTVQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKLSK 671
Query: 246 QEAARAML 269
+ AA ML
Sbjct: 672 KRAAEKML 679
Score = 35.1 bits (77), Expect = 0.98
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREA 242
+N K KTP+ ++ E+ +Y +SGP H+ F K E +A S ++A
Sbjct: 337 ANTKEKTPMCLVNELARYNKIQHQYRLTCESGPAHKKRFTVTLKLGDEEYTAEGPSIKKA 396
Query: 243 KQEAA 257
+ AA
Sbjct: 397 QHSAA 401
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 378 PTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
P D +S ++L+ E+ + KL V++ + + GP HM++F+ +G
Sbjct: 611 PNSDLKSPISLVHEMALKRKLT-VQFEVHGEKGPPHMKVFTTLCKVG 656
>UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n=1;
unknown|Rep: UPI00015BD56E UniRef100 entry - unknown
Length = 232
Score = 41.9 bits (94), Expect = 0.009
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKRE 239
SN+ + T LQE+ K + P Y ++ GP+H+ TF C + SK+
Sbjct: 152 SNSLKQDYKTALQEITQKKWKERPIYNVISVEGPEHRKTFTVECLFKDLRTTGKGNSKKY 211
Query: 240 AKQEAARAML 269
A+QEAA+ ML
Sbjct: 212 AEQEAAKNML 221
>UniRef50_Q16P61 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 318
Score = 41.9 bits (94), Expect = 0.009
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 123 QIPEYECVAQSGPQHQATFEFRCKALGESVSASA-RSKREAKQEAARAMLLCLSTI 287
++PE+ CV SGP H FE+ C+ +G V ++K+ AKQ A M+ L +
Sbjct: 118 EMPEFNCVRSSGPSHAPEFEYECR-IGAIVRRGIHKTKKGAKQAACNEMIKTLQAM 172
Score = 34.3 bits (75), Expect = 1.7
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 78 KTPITVLQEMMM-KLGQIPEYECVAQS---GPQHQATFEFRCKALGESVSASARSKREAK 245
KTPIT LQE+ + K P Y + G + F ALG + S RSK+++K
Sbjct: 10 KTPITELQELCVSKKAPHPLYTFTGEEIDGGNPNSKVFTTSVLALGFTSSGIGRSKKDSK 69
Query: 246 QEAARAMLLCL 278
+AA +L L
Sbjct: 70 HDAAYKLLKLL 80
>UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium
petroleiphilum PM1|Rep: Ribonuclease III - Methylibium
petroleiphilum (strain PM1)
Length = 248
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGES--VSASARSKREAKQ 248
+ P T LQE + Q +P Y + G QH+ F C S V RS+R A+Q
Sbjct: 171 RDPKTELQEWLQARRQPVPGYRIESTRGRQHEQMFTVVCSIPSRSLEVRGEGRSRRAAEQ 230
Query: 249 EAARAMLLCL 278
EAARA L L
Sbjct: 231 EAARAALATL 240
>UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacter
eiseniae EF01-2|Rep: Ribonuclease III -
Verminephrobacter eiseniae (strain EF01-2)
Length = 247
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAKQEAAR 260
T LQE + + + P+Y+ VA+ G H TFE C ALG + SA S++ +Q AA
Sbjct: 177 TALQEWLASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQAAAA 236
Query: 261 AMLLCL 278
AML L
Sbjct: 237 AMLATL 242
>UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|Rep:
Ribonuclease 3 - Methylococcus capsulatus
Length = 230
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKA--LGESVSASARSKREAKQ 248
K P T LQE+M G +P Y + QSG H F RC+ E S+++A+Q
Sbjct: 153 KDPKTRLQELMQGRGLPLPVYTLIDQSGLPHDQHFRVRCEVPLAVEPCVGEGSSRKKAEQ 212
Query: 249 EAARAMLLCLS 281
+AA ML LS
Sbjct: 213 QAAENMLSRLS 223
>UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1;
Psychroflexus torquis ATCC 700755|Rep: DsRNA-specific
ribonuclease - Psychroflexus torquis ATCC 700755
Length = 183
Score = 40.3 bits (90), Expect = 0.026
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 90 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 266
T LQE MK +P YE V+Q+G H TF LG + S+R A+Q AA
Sbjct: 114 TELQEWAMKRKHAMPAYEIVSQTGLAHAPTFHVSVTVLGVTAEGEGASRRLAEQAAAAKC 173
Query: 267 LLCLS 281
L L+
Sbjct: 174 LHALA 178
>UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|Rep:
Ribonuclease 3 - Zymomonas mobilis
Length = 223
Score = 40.3 bits (90), Expect = 0.026
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPE-YECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 251
K P + LQE + P YE V+++GPQH F + G SA SK+EA+
Sbjct: 153 KHPKSALQEWAAAHNRRPPVYEIVSRTGPQHNPCFTIQVSIAGVGEASAEGSSKQEAQTA 212
Query: 252 AARAML 269
AA+A+L
Sbjct: 213 AAQALL 218
>UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep:
Ribonuclease 3 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 243
Score = 40.3 bits (90), Expect = 0.026
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 84 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFR-CKALGESVSASARSKREAKQEAA 257
P T LQE K +PEYE + Q+GP H F C V A A SK+ A+Q+AA
Sbjct: 170 PKTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAA 229
Query: 258 RAML 269
ML
Sbjct: 230 ELML 233
>UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria
(class)|Rep: Ribonuclease 3 - Streptomyces avermitilis
Length = 276
Score = 40.3 bits (90), Expect = 0.026
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 263
T LQE+ G +PEY V ++GP H+ TF + G S + + RSK+EA+Q+AA +
Sbjct: 177 TSLQELTATEGLGVPEY-LVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAES 235
>UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Thiomicrospira crunogena (strain XCL-2)
Length = 233
Score = 39.9 bits (89), Expect = 0.035
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAKQ 248
K P T LQE + Q+PEY + +GP H F C L A+A ++R+A+Q
Sbjct: 158 KDPKTRLQEFLQSNREQLPEYSVMTVNGPAHAQEFTVSCYVAKLNRKFEATATNRRKAEQ 217
Query: 249 EAARAML 269
AA+ L
Sbjct: 218 VAAQEAL 224
>UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2;
Magnetospirillum|Rep: Ribonuclease III -
Magnetospirillum gryphiswaldense
Length = 229
Score = 39.9 bits (89), Expect = 0.035
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 263
T LQE LG+ +P Y V Q GP H TF G + V + SKR A+Q AA
Sbjct: 163 TALQEWAQGLGKPLPVYTVVGQDGPPHDPTFVVSVTVEGVDPVHGTGASKRVAEQAAAAL 222
Query: 264 ML 269
+L
Sbjct: 223 LL 224
>UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000019093 - Anopheles gambiae
str. PEST
Length = 702
Score = 39.9 bits (89), Expect = 0.035
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 245
N ++K+PI+++ E+ ++ +E +++ GP H F +CK K+ +K
Sbjct: 267 NAELKSPISLVHEIAVQRSLSVVFEVISEKGPPHMTVFVTQCKVGTIVTEGEGTGKKLSK 326
Query: 246 QEAARAML 269
+ AA ML
Sbjct: 327 KRAAEKML 334
Score = 34.3 bits (75), Expect = 1.7
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +3
Query: 312 ATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR 491
A E +P G +G P + +S ++L+ E+ + L V + ++++ GP HM
Sbjct: 244 ALEVLKPLTMEGRDGTSVDGLDPNAELKSPISLVHEIAVQRSL-SVVFEVISEKGPPHMT 302
Query: 492 LFSVRASIG 518
+F + +G
Sbjct: 303 VFVTQCKVG 311
>UniRef50_O95793 Cluster: Double-stranded RNA-binding protein
Staufen homolog 1; n=72; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 1 -
Homo sapiens (Human)
Length = 577
Score = 39.9 bits (89), Expect = 0.035
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKR 236
+ N K+ I+ + E+ +K +E +SGP H F + ++GE V +SK+
Sbjct: 177 EEENLNKSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTKV-SVGEFVGEGEGKSKK 235
Query: 237 EAKQEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTV-DSRSYVALL 413
+K+ AA A+L L ++PP A E +P ++ +P + ++ L
Sbjct: 236 ISKKNAAIAVLEELK----KLPPLPAVERVKPRIKKKTKPIVKPQTSPEYGQGINPISRL 291
Query: 414 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
++ + K EY L+ + G R F ++ +G
Sbjct: 292 AQIQQAKKEKEPEYTLLTERGLPRRREFVMQVKVG 326
>UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 247
Score = 39.5 bits (88), Expect = 0.046
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 90 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 263
T LQE + L +P Y+ + Q GP HQ F+ G+ S +SK+EA+Q+AA+
Sbjct: 167 TDLQEYCQRELETLPVYQVMDQRGPDHQKEFDVAVLIRGKIYGEGSGKSKKEAEQKAAKD 226
Query: 264 MLLCLSTIGHRVPPP 308
L L+ V P
Sbjct: 227 ALSRLARTSRDVLQP 241
>UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|Rep:
Ribonuclease 3 - Aquifex aeolicus
Length = 221
Score = 39.5 bits (88), Expect = 0.046
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 90 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 266
T+LQE+ K + PEY ++ GP H+ F K +SK+EA+Q AA +
Sbjct: 154 TILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEEL 213
Query: 267 LLCL 278
+ L
Sbjct: 214 IKLL 217
>UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila
pseudoobscura|Rep: GA20947-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 851
Score = 39.1 bits (87), Expect = 0.060
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSAS--ARSKREAKQ 248
K P+ VL E+ K P +Y +SGP H +F F + G+S + +K+EAK
Sbjct: 776 KHPVCVLNELTSKNRWTPPQYILQQESGPSHIRSFLFSVEINGQSYTPDRPCNNKKEAKL 835
Query: 249 EAARAMLLCLSTIG 290
AA+ LCL ++G
Sbjct: 836 NAAK---LCLESLG 846
>UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema
denticola|Rep: Ribonuclease 3 - Treponema denticola
Length = 246
Score = 39.1 bits (87), Expect = 0.060
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAAR 260
++LQE++ K +P+YE SGP H TF F G+ S ++K+EA+Q A+
Sbjct: 174 SLLQELVQKKFKTVPKYELKKASGPDHDRTFWFSVSINGKVYGPLSGKTKKEAEQSVAK 232
>UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium
thermophilum|Rep: Ribonuclease 3 - Symbiobacterium
thermophilum
Length = 235
Score = 39.1 bits (87), Expect = 0.060
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGESVSAS-ARSKREAKQEAARA 263
T LQE + + G P+Y + + GP H F+ G + R+K+EA+QEAAR
Sbjct: 167 TQLQEQLQRQGAAAPQYRLLVEEGPAHLRRFQVGVYFEGRLLGTGWGRNKKEAEQEAARQ 226
Query: 264 MLL 272
L+
Sbjct: 227 ALM 229
>UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4;
Alphaproteobacteria|Rep: Ribonuclease 3 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 231
Score = 39.1 bits (87), Expect = 0.060
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 251
+ P T LQE G+ +P Y + ++GP H F G + A +S++EA++
Sbjct: 160 RDPKTALQEWAQGQGRPLPTYRVLDRTGPDHAPVFTVEVSVTGVDPAIAKGKSRQEAEKA 219
Query: 252 AARAML 269
AA+A+L
Sbjct: 220 AAKALL 225
>UniRef50_O36966 Cluster: Replicase polyprotein; n=1; Drosophila C
virus|Rep: Replicase polyprotein - Drosophila C virus
Length = 1759
Score = 38.7 bits (86), Expect = 0.080
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 132 EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCLS 281
+Y+ A P+ F C+ LG ++ K+ KQEAAR MLL LS
Sbjct: 40 KYDFDAVESPREAPVFRCTCRFLGYTIMTQGIGKKNPKQEAARQMLLLLS 89
>UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp.
MC-1|Rep: Ribonuclease III - Magnetococcus sp. (strain
MC-1)
Length = 246
Score = 38.7 bits (86), Expect = 0.080
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 263
T+LQE + G+ +P Y ++ GP H+ F C + RSKREA+Q AA+
Sbjct: 173 TLLQEYLQARGEALPIYAVLSAEGPPHERVFVVSCHPREQLCGHGQGRSKREAEQHAAQQ 232
Query: 264 ML 269
L
Sbjct: 233 AL 234
>UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Staufen
- Musca domestica (House fly)
Length = 985
Score = 38.7 bits (86), Expect = 0.080
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 254
K+PI+++ E+ +K +++ + + GP H TF C +G+ V+ A K+ +K++A
Sbjct: 578 KSPISMVFEIGIKRNLPVDFKILREDGPAHMRTFTTAC-IVGQIVTEAEGTGKKISKKKA 636
Query: 255 ARAMLLCLSTIGHRVPP--PFATEFTQPSHSNQSAGECSEGK 374
A+ ML L ++PP P P+ + G S GK
Sbjct: 637 AQKMLEELK----KLPPIEPTTANANSPNKRAKGGGGGSGGK 674
Score = 35.1 bits (77), Expect = 0.98
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +3
Query: 312 ATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR 491
A E + +NQ E D++S ++++ E+ + LP V++ ++ + GPAHMR
Sbjct: 551 AIEALKEEMNNQQKDNEEEKNDEEGDNKSPISMVFEIGIKRNLP-VDFKILREDGPAHMR 609
Query: 492 LFSVRASIG 518
F+ +G
Sbjct: 610 TFTTACIVG 618
>UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Ribonuclease 3 - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 38.7 bits (86), Expect = 0.080
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 263
T LQE + + G +P+Y + GP HQ ++ G + RSK+ A+Q AA+
Sbjct: 166 TRLQERLQARFGDVPQYVLIHADGPPHQRSYSVEAHFRGSCIGQGQGRSKKSAEQAAAKQ 225
Query: 264 ML 269
L
Sbjct: 226 AL 227
>UniRef50_Q4V9C6 Cluster: Zgc:113842; n=6; Clupeocephala|Rep:
Zgc:113842 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 820
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 108 MMKLGQIPE---YECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 278
+MKL Q+ Y+ +Q+GP+H+ F + G + A+ SKR AK A+ +L+ L
Sbjct: 463 LMKLNQLRPGTVYKLASQTGPEHEPQFSMTVEVDGVTYEATGPSKRSAKLHVAQKVLVAL 522
>UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis
alaskensis|Rep: Ribonuclease III - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 226
Score = 38.3 bits (85), Expect = 0.11
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQ 248
K P LQE + G+ P EYE V++ GP H F ++G+ A A+ SK+ A++
Sbjct: 153 KHPKAALQEWALARGRRPPEYEIVSREGPDHAPRFRI-AVSIGKLARAEAQGASKQAAEK 211
Query: 249 EAARAML 269
AA A+L
Sbjct: 212 AAAAALL 218
>UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Ribonuclease III -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 233
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 90 TVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSK-REAKQEAARAM 266
T+LQE + G P Y +++ GP H+ F GE V+ S ++++Q AARA
Sbjct: 154 TLLQETLQAEGLRPTYRVISKQGPPHRPVFISGVSVDGEEVATGRGSSIKQSEQAAARAA 213
Query: 267 L 269
L
Sbjct: 214 L 214
>UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera
araneosa HTCC2155|Rep: Ribonuclease III - Lentisphaera
araneosa HTCC2155
Length = 232
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 75 MKTPITVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQ 248
++ P LQE+ K G P+Y ++++GP+H ++ C E +S ++ + A++
Sbjct: 158 VQNPKGTLQELTQKNHGSPPKYITISKTGPEHDPLYKVECILNKELISKGQGKTLKAAQE 217
Query: 249 EAARAMLLCL 278
AAR + CL
Sbjct: 218 NAARKAIHCL 227
>UniRef50_Q7PPS2 Cluster: ENSANGP00000020540; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000020540 - Anopheles gambiae
str. PEST
Length = 794
Score = 38.3 bits (85), Expect = 0.11
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASA-RS 230
K N K P+++L E K P YE V +SGP H F F+ G E A A +
Sbjct: 714 KINTDGKHPVSILCEYATKHKWNAPMYELVHESGPGHAKNFIFKVLVNGLEYQPAIANNT 773
Query: 231 KREAKQEAARAMLLCLSTIG 290
K+EAK AA+ CL +G
Sbjct: 774 KKEAKATAAK---FCLQQLG 790
>UniRef50_Q17BU1 Cluster: Putative uncharacterized protein; n=1; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 919
Score = 38.3 bits (85), Expect = 0.11
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFR--CKALGESVSASARS 230
K N K P+++L E K +P Y+ V +SGP H F F+ L + + +
Sbjct: 839 KINTDGKHPVSILGEYCSKRKWMPPRYDLVHESGPGHAKNFVFKVIVNGLEYQPAIANNT 898
Query: 231 KREAKQEAARAMLLCLSTIG 290
K+EAK AA+ CL +G
Sbjct: 899 KKEAKATAAK---FCLQQLG 915
>UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 118
Score = 38.3 bits (85), Expect = 0.11
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 78 KTPITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 254
K PI++LQE+ K Q+P+++ + GP H F F+ G S + KQ
Sbjct: 40 KHPISMLQEICARKKWQLPDFQLIFDHGPPHSKQFLFKVAVNGYEYQPQVVSSNK-KQAK 98
Query: 255 ARAMLLCLSTIG 290
A+ L L IG
Sbjct: 99 AQCALYALKAIG 110
>UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. PCC
6803|Rep: Ribonuclease 3 - Synechocystis sp. (strain PCC
6803)
Length = 231
Score = 38.3 bits (85), Expect = 0.11
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 99 QEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAARAMLLC 275
Q + K Q+PEYE + SGP H F F K G+ S SK+ A ++AA L
Sbjct: 167 QWALAKTKQLPEYELINTSGPPHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKS 226
Query: 276 LSTI 287
L +
Sbjct: 227 LGLL 230
>UniRef50_Q9YWP6 Cluster: Vp8; n=1; Kadipiro virus|Rep: Vp8 -
Kadipiro virus
Length = 302
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 266
+LQE+ +K G ++P YE +++ GP H T + A G V +A S+ +A++ AA +
Sbjct: 7 MLQELCVKRGLELPVYEKLSKVGPDHAPTITVKLTANGIEVIEAASSRAQAEKLAAATL 65
>UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
ribonuclease III - Candidatus Kuenenia stuttgartiensis
Length = 236
Score = 37.9 bits (84), Expect = 0.14
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSAS-ARSKRE 239
N K ++LQ+ K G P Y + Q GP H +FE G +SK+E
Sbjct: 159 NQHKKNYKSILQQYSQKEYGITPTYRLLQQIGPDHGKSFEIVVSIKGSEYGRGWGKSKKE 218
Query: 240 AKQEAARAMLLCLS 281
A+Q AA+ L L+
Sbjct: 219 AEQSAAKEALKILT 232
>UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Ribonuclease III -
Desulfuromonas acetoxidans DSM 684
Length = 244
Score = 37.9 bits (84), Expect = 0.14
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 263
T QE+ + G PEYE VA GP HQ + G + S SK+ A+Q+AA
Sbjct: 171 TRFQELAQARFGAAPEYELVATEGPDHQREYTVIVSCEGRHLGQGSGGSKKAAQQQAACQ 230
Query: 264 MLLCL 278
L L
Sbjct: 231 ALKAL 235
>UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease 3 - Bdellovibrio
bacteriovorus
Length = 234
Score = 37.9 bits (84), Expect = 0.14
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 90 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSAS--ARSKREAKQEAAR 260
T LQE++ K + P YE +A+ GP H F C + E V A RSK+ A+Q AA+
Sbjct: 165 TRLQELVQKSSKETPRYEVLAEEGPPHDREF-LVCVKVKEDVWAQGRGRSKKNAEQMAAK 223
Query: 261 AML 269
L
Sbjct: 224 NAL 226
>UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus
aciditrophicus SB|Rep: Ribonuclease III - Syntrophus
aciditrophicus (strain SB)
Length = 240
Score = 37.5 bits (83), Expect = 0.18
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 263
T LQE+ + +IP Y + + GP H FE G + +SK+EA+Q AA
Sbjct: 168 TTLQELSQNRFREIPRYRLIGEYGPDHDKLFESGLSIPGIIETTGKGKSKKEAEQHAAHK 227
Query: 264 ML 269
L
Sbjct: 228 AL 229
>UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 394
Score = 37.5 bits (83), Expect = 0.18
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 93 VLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAM 266
+LQE K+ IP Y C P A+F + G + A+AR+K+EA+ +AAR
Sbjct: 99 LLQEYAQKMNYAIPMYVCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTA 158
Query: 267 LLCL 278
LL +
Sbjct: 159 LLAI 162
>UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein
Staufen homolog 2; n=59; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 2 -
Homo sapiens (Human)
Length = 570
Score = 37.5 bits (83), Expect = 0.18
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
K+ I+++ E+ +K +E + +SGP H +F R S SK+ +K+ AA
Sbjct: 206 KSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAA 265
Query: 258 RAMLLCLSTIGHR--VPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEE 431
+L L + V P +P ++ E +G P ++ L ++ +
Sbjct: 266 TTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNP-------ISRLAQIQQA 318
Query: 432 YKLPGVEYALVADTGPAHMRLFSVRASIG 518
K +Y L+++ G R F ++ +G
Sbjct: 319 KKEKEPDYVLLSERGMPRRREFVMQVKVG 347
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREA 242
+N K KT + ++ E+ P+Y+ + + GP H F + +LGE S S +
Sbjct: 2 ANPKEKTAMCLVNELARFNRVQPQYKLLNERGPAHSKMFSVQL-SLGEQTWESEGSSIKK 60
Query: 243 KQEAARAMLLCLSTIGHRVPPP 308
Q+A L ST+ V P
Sbjct: 61 AQQAVANKALTESTLPKPVQKP 82
>UniRef50_UPI00015B62EF Cluster: PREDICTED: similar to conserved
hypothetical protein; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 900
Score = 37.1 bits (82), Expect = 0.24
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 78 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARS--KREAKQ 248
K P+++L E K P YE + GP H+ F F+ K G + S K+ AK
Sbjct: 827 KHPVSLLGEYCSKRKFGAPVYELCFECGPDHKKNFLFKVKVNGVEYKPAVASPNKKLAKA 886
Query: 249 EAARAMLLCLSTIG 290
EAA+ +CL +IG
Sbjct: 887 EAAQ---VCLQSIG 897
>UniRef50_A0NFW6 Cluster: ENSANGP00000031506; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031506 - Anopheles gambiae
str. PEST
Length = 175
Score = 37.1 bits (82), Expect = 0.24
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 126 IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCLSTIG 290
+PE V GP H FEF C+ S +K+ AKQ A + M+ L ++G
Sbjct: 119 LPEIVQVRSYGPSHAPVFEFECRIREIVRRGSHSTKKGAKQIACQEMIKTLQSVG 173
Score = 36.7 bits (81), Expect = 0.32
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 1/149 (0%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQ 248
K K PIT+LQEM K+ +P Y+ + + H K + RSK+EAK
Sbjct: 8 KGKMPITMLQEMCFKVKSTLPIYQFLGEECSPHSV----NVKLFSYMATGVGRSKQEAKH 63
Query: 249 EAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCE 428
E+A ++ + P E + + + G + + T V ++++C
Sbjct: 64 ESAWQLIRLALEL------PAGEEDEMVATAAEERGSLAALEIGT----DRVNQVRDICI 113
Query: 429 EYKLPGVEYALVADTGPAHMRLFSVRASI 515
+ P E V GP+H +F I
Sbjct: 114 QRNFPLPEIVQVRSYGPSHAPVFEFECRI 142
>UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Ribonuclease 3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 235
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 90 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQEAAR 260
T LQE++ K + YE + + GP HQ F + + + A+ R SK+EA+QEAA+
Sbjct: 165 TTLQELLQKEKNNVLRYEILLEEGPPHQKIFTAGV-IINDKLIATGRGKSKKEAEQEAAK 223
Query: 261 AML 269
L
Sbjct: 224 KAL 226
>UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep:
Ribonuclease 3 - Brucella abortus
Length = 245
Score = 37.1 bits (82), Expect = 0.24
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 263
T LQE + G + P Y +++SGP H F G RSKR A+Q AA A
Sbjct: 172 TELQEWAHQQGNVHPVYAILSRSGPDHDPLFLVEVTVKGFAPEKGEGRSKRIAEQSAAEA 231
Query: 264 ML 269
ML
Sbjct: 232 ML 233
>UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=5; root|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 850
Score = 36.7 bits (81), Expect = 0.32
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 108 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 278
+M+L QI +Y ++QSGP H F G + A+ SKR AK + A L L
Sbjct: 514 LMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDVQGNTYQATGNSKRTAKLQVALKALQAL 573
Query: 279 STI 287
+
Sbjct: 574 GFV 576
>UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila melanogaster|Rep:
AT18855p - Drosophila melanogaster (Fruit fly)
Length = 886
Score = 36.7 bits (81), Expect = 0.32
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVS--ASARSKREAKQ 248
K P+ VL E+ K +P +Y+ GP H +F F + G++ + + +K+EAK
Sbjct: 811 KHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNRSFLFSVEINGQTFTPDRGSNNKKEAKL 870
Query: 249 EAARAMLLCLSTIGHRVPP 305
AA LCL ++G +PP
Sbjct: 871 NAA---ALCLRSLG-ILPP 885
>UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding protein;
n=51; Euteleostomi|Rep: Spermatid perinuclear
RNA-binding protein - Homo sapiens (Human)
Length = 672
Score = 36.3 bits (80), Expect = 0.43
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Frame = +3
Query: 96 LQEMMMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA--- 257
L +M+L QI +Y+ ++QSGP H F G + AS SK+ AK A
Sbjct: 388 LMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKV 447
Query: 258 -RAM---------LLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVA 407
+AM + C+S+ + E T S+S+ + G + + T++ R+
Sbjct: 448 LQAMGYPTGFDADIECMSS-DEKSDNESKNE-TVSSNSSNNTGNSTTETSSTLEVRTQGP 505
Query: 408 LL----KELCEEY--KLPGVEYALVADTGPAHMRLFSVRASI 515
+L K E K G++Y L+++TG +H + F + +
Sbjct: 506 ILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEV 547
>UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep:
Ribonuclease 3 - Rhodopseudomonas palustris
Length = 272
Score = 36.3 bits (80), Expect = 0.43
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 KSNNKMKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSK 233
K ++ P TVLQE G P Y V ++GP H F G E SK
Sbjct: 189 KPARSLRDPKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSK 248
Query: 234 REAKQEAARAML 269
R A++ AA AML
Sbjct: 249 RAAEKVAASAML 260
>UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep:
Ribonuclease 3 - Geobacter sulfurreducens
Length = 248
Score = 36.3 bits (80), Expect = 0.43
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQEAAR 260
T QE+ + G +P Y V SGP H F +GE + + RSK+EA+Q AAR
Sbjct: 175 TDFQELAQAQYGGLPRYVLVDTSGPAHDLRFTVAAY-VGERLLGQGTGRSKKEAEQAAAR 233
Query: 261 AMLLCLST 284
L L T
Sbjct: 234 QCLERLET 241
>UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3;
n=75; Euteleostomi|Rep: Interleukin enhancer-binding
factor 3 - Homo sapiens (Human)
Length = 894
Score = 36.3 bits (80), Expect = 0.43
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 51 KL*KSNNKMKTPITVLQEMMMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSAS 221
K+ K K + P + +M+L Q+ +Y+ V+Q+GP H F + G S AS
Sbjct: 389 KIQKKEEKAEPPQAM--NALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEAS 446
Query: 222 ARSKREAKQEAARAML 269
SK+ AK A +L
Sbjct: 447 GPSKKTAKLHVAVKVL 462
>UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog. -
Takifugu rubripes
Length = 275
Score = 35.9 bits (79), Expect = 0.56
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 108 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 278
+M+L QI +Y ++QSGP H F G + A+ SKR AK + A L L
Sbjct: 155 LMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDIQGTTYQATGNSKRTAKLQVALKALQAL 214
Query: 279 STI 287
+
Sbjct: 215 GFV 217
>UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 6 SCAF14544, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 687
Score = 35.9 bits (79), Expect = 0.56
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKRE 239
+N K KTP+ ++ E+ P+Y+ +++ GP H F + ALGE V A S ++
Sbjct: 2 ANPKEKTPMCLVNELARFNRIQPQYKLLSERGPAHAKIFTVQL-ALGEQVWEAEGTSIKK 60
Query: 240 AKQE-AARAM 266
A+ AARA+
Sbjct: 61 AQHSTAARAL 70
Score = 35.5 bits (78), Expect = 0.74
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +3
Query: 63 SNNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREA 242
S++ K+ I+++ E+ +K +E + +SGP H +F R S SK+ +
Sbjct: 263 SSDASKSEISLVYEIALKRNLCVNFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLS 322
Query: 243 KQEAARAML 269
K+ AA ++L
Sbjct: 323 KKRAAISIL 331
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 330 PSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRA 509
P Q+ E E + S+S ++L+ E+ + L V + ++ ++GP HM+ F R
Sbjct: 247 PERPPQNTEEKGESDDSSDASKSEISLVYEIALKRNLC-VNFEVLKESGPPHMKSFLTRV 305
Query: 510 SIG 518
++G
Sbjct: 306 TVG 308
>UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris
aestuarii DSM 271|Rep: Ribonuclease III -
Prosthecochloris aestuarii DSM 271
Length = 277
Score = 35.5 bits (78), Expect = 0.74
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 PEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAMLLCLST 284
P+Y + + G +HQ TF G+ + +A K++A+Q AAR LL L +
Sbjct: 218 PQYTIIREEGAEHQKTFTVEVSFDGKPFGTGTAARKKDAEQAAARRALLLLQS 270
>UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum
reducens MI-1|Rep: Ribonuclease III - Desulfotomaculum
reducens MI-1
Length = 246
Score = 35.5 bits (78), Expect = 0.74
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 90 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 263
T LQE++ + P Y + +SGP H TF G+ + S SK+EA+Q+AA+
Sbjct: 167 TELQEILQQSSPDPLTYTIMDESGPDHDKTFTAGVIYKGKVIGKGSGHSKKEAEQQAAKD 226
Query: 264 MLLCLSTIG 290
L +G
Sbjct: 227 AFQHLEGMG 235
>UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter ruber
DSM 13855|Rep: Ribonuclease III - Salinibacter ruber
(strain DSM 13855)
Length = 248
Score = 35.1 bits (77), Expect = 0.98
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 96 LQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQEAARAM 266
L E + LG+ P Y V + GP H TF + +G++ +A SK++A+Q+AAR
Sbjct: 179 LLEHLQALGRPQPTYHVVEEKGPSHDKTFTVEVR-VGDAAYERGTAGSKQDAEQQAARRT 237
Query: 267 L 269
L
Sbjct: 238 L 238
>UniRef50_Q7Z6F6 Cluster: Interferon-inducible double-stranded
RNA-dependent protein kinase; n=4; Homo/Pan/Gorilla
group|Rep: Interferon-inducible double-stranded
RNA-dependent protein kinase - Homo sapiens (Human)
Length = 510
Score = 35.1 bits (77), Expect = 0.98
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 LQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLL 272
L K G + +Y+ + SGP H F F+ G E RSK+EAK AA+ +
Sbjct: 14 LNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVE 73
Query: 273 CLSTIGHRVPPPFAT 317
L+ V P T
Sbjct: 74 ILNKEKKAVSPLLLT 88
>UniRef50_P19525 Cluster: Interferon-induced, double-stranded
RNA-activated protein kinase; n=14; Eutheria|Rep:
Interferon-induced, double-stranded RNA-activated
protein kinase - Homo sapiens (Human)
Length = 551
Score = 35.1 bits (77), Expect = 0.98
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 LQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLL 272
L K G + +Y+ + SGP H F F+ G E RSK+EAK AA+ +
Sbjct: 14 LNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVE 73
Query: 273 CLSTIGHRVPPPFAT 317
L+ V P T
Sbjct: 74 ILNKEKKAVSPLLLT 88
>UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10493,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 673
Score = 34.7 bits (76), Expect = 1.3
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 108 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 278
+M+L QI +Y ++QSGP H F G AS SK+ AK A + L
Sbjct: 348 LMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDVDGTVYEASGSSKKTAKLHVA---VKVL 404
Query: 279 STIGHRVPPPFATEFTQPSHSNQSAGE 359
+G+ P F ++ S +S GE
Sbjct: 405 QAMGY--PTGFDSDLDPMSSDEKSDGE 429
>UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium
phytofermentans ISDg|Rep: Ribonuclease III - Clostridium
phytofermentans ISDg
Length = 235
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 263
T+LQE++ + + YE + ++GP H F K ES+ + R+K+ A+QEAA
Sbjct: 166 TILQEIVQSEYKKHLSYELLQETGPDHNKKFTVVAKMDEESLEIGTGRTKKAAEQEAAYR 225
Query: 264 MLLCL 278
+L L
Sbjct: 226 SILQL 230
>UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease III - Solibacter usitatus
(strain Ellin6076)
Length = 271
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 396 SYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 518
++ + L+EL + +LP Y++V + GP H + F+V +G
Sbjct: 172 NFKSALQELAQTRRLPQPRYSVVRERGPEHSKTFTVEVRVG 212
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 90 TVLQEMMM--KLGQIPEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAAR 260
+ LQE+ +L Q P Y V + GP+H TF + E + A R+K+ A Q AAR
Sbjct: 175 SALQELAQTRRLPQ-PRYSVVRERGPEHSKTFTVEVRVGKEWTAQAEGRTKKIAAQRAAR 233
Query: 261 AM 266
+
Sbjct: 234 GL 235
>UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:
Adenosine deaminase - Apis mellifera (Honeybee)
Length = 620
Score = 34.7 bits (76), Expect = 1.3
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Frame = +3
Query: 66 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 245
N + K + L E+ K G + Y+ V Q+GP H F + G++ R+K+ AK
Sbjct: 31 NPQPKNAVCALNEL--KSGAV--YKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAK 86
Query: 246 QEAARAML-------------LCLSTIGHRVP--PPFATEFTQPSHSNQSAGECSEGKAP 380
AA L ++T +P P F ++ T+ + +A + +
Sbjct: 87 HAAAELALRNIVQFRNTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQEPK 146
Query: 381 TVD---SRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI 515
+ + VAL+ EL PGV Y V+D G ++ + F++ +I
Sbjct: 147 NTNKFLEKGPVALINEL-----YPGVVYKCVSDNGESYAK-FTISVTI 188
>UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep:
Ribonuclease 3 - Leptospira interrogans
Length = 247
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 90 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAARA 263
T LQE K +I P Y ++SGP H TF+ + + S S SK+ A+Q AA+
Sbjct: 179 TQLQEYSQKHFKILPIYRTKSESGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKE 238
Query: 264 M 266
+
Sbjct: 239 L 239
>UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;
n=84; Coelomata|Rep: Double-stranded RNA-specific
editase 1 - Homo sapiens (Human)
Length = 741
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 72 KMKTPITVL-QEMMMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKRE 239
+ KTP VL + +M+L +I +Y ++Q+GP H F + G+ S +K++
Sbjct: 70 RRKTPGPVLPKNALMQLNEIKPGLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKK 129
Query: 240 AKQEAARAML 269
AK AA L
Sbjct: 130 AKLHAAEKAL 139
>UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON
DNA-binding protein isoform A; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to SON DNA-binding
protein isoform A - Tribolium castaneum
Length = 626
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 78 KTPITVLQEMMMK--LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQE 251
K P+++L E K LG P+Y+ + GP H+ F F+ G + S + + +
Sbjct: 553 KHPVSLLGEYASKKKLGA-PQYDLCFECGPDHKKNFLFKVTLNGVEYKPNVASPNKKEAK 611
Query: 252 AARAMLLCLSTIG 290
AA A +CL +G
Sbjct: 612 AAAAS-VCLQHLG 623
>UniRef50_Q4SXU5 Cluster: Chromosome undetermined SCAF12326, whole
genome shotgun sequence; n=4; Clupeocephala|Rep:
Chromosome undetermined SCAF12326, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1012
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 246 QEAARAMLLCLSTIG--HR-VPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVA 407
Q A R + +C+ G HR +PPP A H + GE +EG+ P + R A
Sbjct: 511 QPALRGLEVCVEHQGDQHRGIPPPEARPLPPRLHPQRDPGETAEGRGPRAEGRGPAA 567
>UniRef50_Q6R257 Cluster: DsRNA-binding protein; n=1; Solanum
lycopersicum|Rep: DsRNA-binding protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 318
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 126 IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLLCLSTIG 290
IP+YEC +F G + + A+AR+K+EA+ +AAR LL + + G
Sbjct: 1 IPQYECERYDSESKIISFTCTVDVGGMKYIGAAARTKKEAEIKAARTALLAVQSSG 56
>UniRef50_Q94239 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 705
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 69 NKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKAL--GESVSASARSKREA 242
+K K+ I+ + E +L +E + + GP H + RC + G V A A K +
Sbjct: 288 HKQKSVISDIHEKAYQLKVNVVFEVLKEEGPPHDRQYVVRCAFVTSGNVVKAEAVGKGKK 347
Query: 243 KQEAAR-AMLLCLSTIGHRVP 302
K+ A + A L+T+ H P
Sbjct: 348 KKSAQQEACTQLLATVEHLTP 368
Score = 32.3 bits (70), Expect = 6.9
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 93 VLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLL 272
++Q K + P +E VA+ G F + K + +KR AK+ AA AML
Sbjct: 418 LIQVTQAKSKEHPTFELVAEHGVSKYKEFIIQVKYGDDVQEGKGPNKRLAKRAAAEAMLE 477
Query: 273 CLSTIGHRVPPPFATEFTQPSHSNQSAGECSE--GKAPTVDSRS 398
+ + +PPP + + + S E S G PT S S
Sbjct: 478 SIGFV-KPLPPPGKSLLKKMIDCDPSLPEISHWTGPPPTAVSVS 520
>UniRef50_UPI0000EB3B4C Cluster: Double-stranded RNA-specific
editase B2 (EC 3.5.-.-) (dsRNA adenosine deaminase B2)
(RNA-dependent adenosine deaminase 3) (RNA-editing
deaminase 2) (RNA-editing enzyme 2).; n=2; Eutheria|Rep:
Double-stranded RNA-specific editase B2 (EC 3.5.-.-)
(dsRNA adenosine deaminase B2) (RNA-dependent adenosine
deaminase 3) (RNA-editing deaminase 2) (RNA-editing
enzyme 2). - Canis familiaris
Length = 675
Score = 33.5 bits (73), Expect = 3.0
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQAT-FEFRCKALGESVSASARSKREAKQEA 254
+ P+ VL E+ L Y C+A+ +A F G + S RSK+ AK +A
Sbjct: 174 RNPVVVLNELRSGL----RYVCLAEPADGQRAKGFVMAVSVDGRTFEGSGRSKKLAKGQA 229
Query: 255 ARAMLLCLSTI 287
ARA L L I
Sbjct: 230 ARAALQALFDI 240
>UniRef50_Q9LJH6 Cluster: Genomic DNA, chromosome 3, P1 clone: MAG2;
n=6; core eudicotyledons|Rep: Genomic DNA, chromosome 3,
P1 clone: MAG2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1158
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 222 QKQRQTHLKPYSGTQMWPGVGALTEQ-HIHTLESVQVSSSFLAVL-LWEFSSCC 67
Q R L P+SG M+P + AL + TL++++ S F L LW+++S C
Sbjct: 361 QSWRAATLCPFSGMDMFPSIEALVKNGENRTLQAIEQESGFGNQLRLWKWASYC 414
>UniRef50_A5BPJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 292
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 93 VLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGES-VSASARSKREAKQEAARA 263
+LQEM K G Q+P Y +SG H TF + GE+ V A++K+ A+ AA+A
Sbjct: 226 LLQEMARKEGYQLPVYS-TEKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKA 283
Score = 31.9 bits (69), Expect = 9.2
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 90 TVLQEMM-MKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSAS--ARSKREAKQEAAR 260
T LQE+ K PEY + GP H TF G S S ARS +EA+ AA
Sbjct: 13 TRLQELCHRKRWNPPEYS-TRKDGPPHNPTFXATVSVGGLSFSTDHPARSSKEAQSNAAG 71
Query: 261 AMLLCLSTIGHRVPPPFA 314
L + + PPP A
Sbjct: 72 ---LAIQYLTDPKPPPLA 86
>UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4;
Drosophila|Rep: Maternal effect protein staufen -
Drosophila melanogaster (Fruit fly)
Length = 1026
Score = 33.5 bits (73), Expect = 3.0
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 257
K+PI+ + E+ +K ++ + + GP H F C K+ +K+ AA
Sbjct: 577 KSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAA 636
Query: 258 RAMLLCLSTIGHRVP 302
ML+ L + P
Sbjct: 637 EKMLVELQKLPPLTP 651
>UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14;
Gammaproteobacteria|Rep: Ribonuclease 3 - Xylella
fastidiosa
Length = 227
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 78 KTPITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGE---SVSASARSKREAK 245
K P T LQE + + +P YE + +SG H F C LGE S+R A+
Sbjct: 154 KDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFRVSC-TLGELKLRTEGEGSSRRLAE 212
Query: 246 QEAA 257
Q+AA
Sbjct: 213 QDAA 216
>UniRef50_UPI0000E4A971 Cluster: PREDICTED: similar to dsRNA adenosine
deaminase; n=11; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to dsRNA adenosine deaminase -
Strongylocentrotus purpuratus
Length = 1733
Score = 33.1 bits (72), Expect = 4.0
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 254
K P++ L E + + QSGP H F F G ++RSK++ ++EA
Sbjct: 1248 KNPVSALTEYAQARHLPVSIDLLQQSGPPHNPRFVFAACVGGRRFQHVTSRSKKDGRREA 1307
Query: 255 ARAMLLCLSTIGHRVP 302
A L L G P
Sbjct: 1308 ADMALRTLVAEGSLQP 1323
>UniRef50_A1KR30 Cluster: Double stranded RNA activated protein
kinase 1; n=2; Xenopus|Rep: Double stranded RNA
activated protein kinase 1 - Xenopus laevis (African
clawed frog)
Length = 578
Score = 33.1 bits (72), Expect = 4.0
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Frame = +3
Query: 114 KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASA-RSKREAKQEAARAMLLCLSTIG 290
K G +++ V +GP H F F+ GE + + K+ A+ AA+ L L
Sbjct: 16 KNGLSYQFKKVEATGPSHDPRFTFQVFVNGEKLGEGQDKKKKGAECMAAKMALSTLKERE 75
Query: 291 HRVPPPFATEFTQPSHS----NQSAGECSE---GKAPTVDSRSYVALLKELCEEYKLPGV 449
+ T Q S S + G S G+ +YV +L ELC+++ L +
Sbjct: 76 NSAATVIQTTSEQDSSSIVFLASNTGSPSAVCIGETENGCDENYVGILHELCQKHTL--I 133
Query: 450 EYALVADTGPAHMRLFSVRASIG 518
L G H+ F +A IG
Sbjct: 134 VTFLDERHGQPHIPEFFCKAVIG 156
>UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:
Ribonuclease III - Roseiflexus sp. RS-1
Length = 237
Score = 33.1 bits (72), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 129 PEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAML 269
P Y + +SGP+H+ F +A E + + SK+ A+Q AARA L
Sbjct: 180 PRYHEIDRSGPEHRPEFTVEVRAGEERLGTGKGPSKQAAEQAAARAAL 227
>UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep:
Ribonuclease 3 - Rickettsia conorii
Length = 227
Score = 33.1 bits (72), Expect = 4.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 PITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 260
P T LQE +P Y + + G H +TF K + + + +EA++ AAR
Sbjct: 159 PKTALQEWAQASDHHLPIYRLIKREGASHSSTFTVLVKVKDYEQTGTGHTIKEAEKNAAR 218
Query: 261 AML 269
++L
Sbjct: 219 SLL 221
>UniRef50_UPI0000D564B2 Cluster: PREDICTED: similar to CG17686-PC,
isoform C isoform 1; n=2; Tribolium castaneum|Rep:
PREDICTED: similar to CG17686-PC, isoform C isoform 1 -
Tribolium castaneum
Length = 359
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 84 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARA 263
P+ +L +MM ++E + ++G F F+C G+S + + +K+ AK+ AA A
Sbjct: 285 PLMLLNQMMPHA----QFEELGRTGNPPNVIFTFKCTVGGQSFNGTGPNKKSAKKMAAFA 340
Query: 264 MLLCLSTIGHRVP 302
+C +G + P
Sbjct: 341 --VCHKMLGIQYP 351
>UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Ribonuclease III -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 242
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 254
KT + L + KL P Y + GP H TF G+ ++ S +SK++A+Q A
Sbjct: 169 KTQLQELTQARYKL--TPVYVLDREEGPDHDKTFHMNVVLEGQVLAGGSGKSKKDAQQAA 226
Query: 255 ARAML 269
A L
Sbjct: 227 AEKAL 231
>UniRef50_Q8H1D4 Cluster: Putative uncharacterized protein
At3g62800; n=3; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At3g62800 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 355
Score = 32.7 bits (71), Expect = 5.2
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 93 VLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARAML 269
+LQE+ K + + A SGP H TF + G+ S A++K+ A+ AA+
Sbjct: 86 LLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEFAGKVFSGEEAKTKKLAEMSAAKVAF 145
Query: 270 LCL 278
+ +
Sbjct: 146 MSI 148
>UniRef50_Q53L62 Cluster: Helix-loop-helix DNA-binding domain,
putative; n=2; Oryza sativa|Rep: Helix-loop-helix
DNA-binding domain, putative - Oryza sativa subsp.
japonica (Rice)
Length = 458
Score = 32.7 bits (71), Expect = 5.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 QIPEYECVAQSGPQHQATFEFRC-KALGESVSASARSKREA 242
++ E E +Q P+ T RC K+ G+ VSA AR+KR+A
Sbjct: 292 RVEELESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKA 332
>UniRef50_UPI0000D55F94 Cluster: PREDICTED: similar to cubilin; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to cubilin -
Tribolium castaneum
Length = 2955
Score = 32.3 bits (70), Expect = 6.9
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 254
KTPI++LQE+M G +P Y + G +F+ KA G + SK+ AK E+
Sbjct: 4 KTPISLLQELMAARGISLPVY---IEEG--FGTSFKCTVKAGGVTACGYGTSKKNAKHES 58
Query: 255 ARAMLLCL 278
A+ L+ L
Sbjct: 59 AKNALVKL 66
>UniRef50_Q2TPU0 Cluster: VP11; n=2; Liao ning virus|Rep: VP11 -
Liao ning virus
Length = 198
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 KMKTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQ 248
++ + ++QE +KL + P YE V GP H +F + SK+ A+
Sbjct: 6 RINNAVGLMQEYAIKLSESAPSYEDVGFEGPPHNRSFTISATFRDKKYEGIGPSKKVARS 65
Query: 249 EAARAML 269
AA +L
Sbjct: 66 VAANKIL 72
>UniRef50_Q4SKQ4 Cluster: Chromosome undetermined SCAF14565, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14565,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 812
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 132 EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAML 269
+Y V+Q+GP H F + G + + +K++AK +AA L
Sbjct: 116 QYHMVSQTGPVHAPVFSIAVEVNGLTFEGTGPTKKKAKMKAAELAL 161
>UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta
proteobacterium MLMS-1|Rep: Ribonuclease III - delta
proteobacterium MLMS-1
Length = 233
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 90 TVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 263
+ LQE++ + G+ P Y + GP H F R + G+ + R K+ A++ AA A
Sbjct: 165 SALQEVLQQRHGEGPVYYLENEEGPDHDKRFTVRVELQGKVLGRGRGRGKKAAERAAAAA 224
Query: 264 MLLCLSTIG 290
L L G
Sbjct: 225 ALEALPAPG 233
>UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Ribonuclease
III - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 233
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 387 DSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLF 497
D Y + L+EL + V YA++ ++GPAH ++F
Sbjct: 158 DYYDYKSKLQELVQARDKENVSYAIIEESGPAHAKVF 194
>UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovleyi
SZ|Rep: Ribonuclease III - Geobacter lovleyi SZ
Length = 228
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 96 LQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAML 269
LQE++ Q P Y V Q GP H F G + RSK+ A+Q AA + L
Sbjct: 164 LQELLAARKQAAPVYNLVDQQGPDHDRLFCIEVSVDGMPLGQGQGRSKKAAQQSAAESAL 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,830,037
Number of Sequences: 1657284
Number of extensions: 8212623
Number of successful extensions: 25265
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 24493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25235
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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