Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   0.71 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   0.71 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 311 LVLIICVSSYFILMGILTLYTTFKEKGIFVVA 406
           ++L   V+SY  +  I+    +FKE G+F++A
Sbjct: 288 ILLTTIVASYGSVTEIMDQGISFKEAGLFMIA 319


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 311 LVLIICVSSYFILMGILTLYTTFKEKGIFVVA 406
           ++L   V+SY  +  I+    +FKE G+F++A
Sbjct: 288 ILLTTIVASYGSVTEIMDQGISFKEAGLFMIA 319


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 256 CGPLRTAMGLSLSIPSIKTG 315
           C   +T +G+S S+  +KTG
Sbjct: 283 CNEGQTILGISYSLEKLKTG 302


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 256 CGPLRTAMGLSLSIPSIKTG 315
           C   +T +G+S S+  +KTG
Sbjct: 283 CNEGQTILGISYSLEKLKTG 302


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 398 VVAKEKVGNNTRVWEASSYVKKHDDKYNLV-IVMRDT 505
           VVA E+VG++  V E     +    K NLV   ++DT
Sbjct: 543 VVAMERVGSHVNVSEILKMDQNGQIKRNLVDAPLKDT 579


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 424 ISNLLLGYHKDALLFECSVE 365
           I N L GY    ++F+C +E
Sbjct: 236 IFNSLFGYQIILVIFDCCLE 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,914
Number of Sequences: 336
Number of extensions: 2536
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)