Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094832-1|AAM11185.1|  199|Drosophila melanogaster LD42119p pro...   135   4e-32
AE014298-1630|AAF48051.1|  199|Drosophila melanogaster CG1751-PA...   135   4e-32
BT022624-1|AAY55040.1|  422|Drosophila melanogaster IP11978p pro...    28   8.8  
BT022552-1|AAY54968.1|  454|Drosophila melanogaster IP11878p pro...    28   8.8  
AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope pro...    28   8.8  
AE014297-299|AAS65099.1|  422|Drosophila melanogaster CG1427-PB,...    28   8.8  
AE014297-298|AAF51994.3|  448|Drosophila melanogaster CG1427-PA,...    28   8.8  

>AY094832-1|AAM11185.1|  199|Drosophila melanogaster LD42119p
           protein.
          Length = 199

 Score =  135 bits (326), Expect = 4e-32
 Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
 Frame = +2

Query: 107 EAAKINKWDGAAAKNAVDDAIREVMTGDL-KCKESFALIDGRLFXXXXXXXXXXXXXXWD 283
           E  K+NKWDG+A K+A+DDA++  + GD  + KE F L++ RL               WD
Sbjct: 13  ELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGLVNTRLALCALAVSVAIMAHAWD 72

Query: 284 YLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAKEKVGNNTRVWEASSYVKK 463
           + +PFP+SR VL+  V +YF L+GILTL+++F+EKG F VA +K     R+WEASS ++K
Sbjct: 73  FTHPFPESRPVLLFSVLAYFALLGILTLHSSFREKGTFAVALQKDKERERLWEASSDMRK 132

Query: 464 HDDKYNLVIVMRDT-NGNTR 520
           +DDKY L + +RDT NG  R
Sbjct: 133 YDDKYLLTLSVRDTKNGKRR 152


>AE014298-1630|AAF48051.1|  199|Drosophila melanogaster CG1751-PA
           protein.
          Length = 199

 Score =  135 bits (326), Expect = 4e-32
 Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
 Frame = +2

Query: 107 EAAKINKWDGAAAKNAVDDAIREVMTGDL-KCKESFALIDGRLFXXXXXXXXXXXXXXWD 283
           E  K+NKWDG+A K+A+DDA++  + GD  + KE F L++ RL               WD
Sbjct: 13  ELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGLVNTRLALCALAVSVAIMAHAWD 72

Query: 284 YLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAKEKVGNNTRVWEASSYVKK 463
           + +PFP+SR VL+  V +YF L+GILTL+++F+EKG F VA +K     R+WEASS ++K
Sbjct: 73  FTHPFPESRPVLLFSVLAYFALLGILTLHSSFREKGTFAVALQKDKERERLWEASSDMRK 132

Query: 464 HDDKYNLVIVMRDT-NGNTR 520
           +DDKY L + +RDT NG  R
Sbjct: 133 YDDKYLLTLSVRDTKNGKRR 152


>BT022624-1|AAY55040.1|  422|Drosophila melanogaster IP11978p
           protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 232 VPLCSGCWCGPLRTAMGLSLSIPSIK 309
           +P C+GC+  P+ T M L+L + S++
Sbjct: 75  LPSCAGCFLVPMCTGMTLTLCLQSLR 100


>BT022552-1|AAY54968.1|  454|Drosophila melanogaster IP11878p
           protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 232 VPLCSGCWCGPLRTAMGLSLSIPSIK 309
           +P C+GC+  P+ T M L+L + S++
Sbjct: 107 LPSCAGCFLVPMCTGMTLTLCLQSLR 132


>AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope
           protein protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 320 IICVSSYFILMGILTLYTTFKEKGI 394
           IIC++++ I++  LTLY  +K K I
Sbjct: 450 IICITTFVIMIISLTLYVAYKFKNI 474


>AE014297-299|AAS65099.1|  422|Drosophila melanogaster CG1427-PB,
           isoform B protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 232 VPLCSGCWCGPLRTAMGLSLSIPSIK 309
           +P C+GC+  P+ T M L+L + S++
Sbjct: 131 LPSCAGCFLVPMCTGMTLTLCLQSLR 156


>AE014297-298|AAF51994.3|  448|Drosophila melanogaster CG1427-PA,
           isoform A protein.
          Length = 448

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 232 VPLCSGCWCGPLRTAMGLSLSIPSIK 309
           +P C+GC+  P+ T M L+L + S++
Sbjct: 131 LPSCAGCFLVPMCTGMTLTLCLQSLR 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,452,846
Number of Sequences: 53049
Number of extensions: 453244
Number of successful extensions: 883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)