Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309B06f
(501 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.032
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.074
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.097
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.22
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 30 0.22
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.39
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 29 0.52
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 2.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.1
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 26 3.7
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 26 3.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 3.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 3.7
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 3.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.7
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 25 4.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 4.8
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 25 4.8
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 6.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 25 8.4
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 8.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 8.4
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 25 8.4
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.032
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 282 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPR--SSVRPVFISTSTPVPASGPIP 455
+PP+ +P A+ ++P+P+ + +++ S V P SS P S+ VP+ P P
Sbjct: 1477 APPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPS--PAP 1534
Query: 456 PA 461
PA
Sbjct: 1535 PA 1536
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 31.5 bits (68), Expect = 0.074
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +3
Query: 282 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 452
SP L+ AM P +ISS T S + P P F S+ +P P SGPI
Sbjct: 225 SPMKLSPANQQAMPPYPQMLGPGSISSYTNSNLGPSAGFRPPTFFSSPSPQPYSGPI 281
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.097
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +3
Query: 171 SPQPSSARTVLCSTLL--SGRXXXXXXXXXXXXXIGLNSSPPSLTHNVPAAMDSLPIPTP 344
SP P+++ + ST + +G S+PP S P+P+
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 345 LCAISSTTASKVKPPRSSVRPV--FISTSTPVPASGPIPPADKDAT 476
+ S TT++ + P +S PV + ++ S P PPA +T
Sbjct: 336 --STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSST 379
Score = 29.5 bits (63), Expect = 0.30
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 285 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPV--FISTSTPVPASGPIPP 458
PP+ T + +S P+PT + S TT++ + P +S PV + ++ S P PP
Sbjct: 264 PPTSTSSTDT--NSSPLPTT--STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPP 319
Query: 459 ADKDAT 476
A +T
Sbjct: 320 ASTSST 325
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.13
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 309 PAAMDSLPIPTPLCAISSTTAS---KVKPPRSSV-RPVFISTSTPVPASGPIPPADKDA 473
PAA S+P P P+ I S+ S K PP + + +PV S + P+ P+P A
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKA 1021
Score = 28.7 bits (61), Expect = 0.52
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = +3
Query: 306 VPAAMDSLPIP--TPLCAISSTTASKVKPP---RSSVRPVFISTS--TPVPASGPIPPAD 464
VP+ +PIP TP SS+ A PP SS P + S PVPA IPP
Sbjct: 1036 VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Query: 465 K 467
K
Sbjct: 1096 K 1096
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 306 VPAAMDSLPIPTPLCAI----SSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDA 473
VP ++ P+P P + +TA V P + + PV + T+ P P A +
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVS 1250
Query: 474 T 476
T
Sbjct: 1251 T 1251
Score = 25.0 bits (52), Expect = 6.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 285 PPSLTHNVPAAMD-SLPIP-TPLCAISSTTASKVKPPRSSVRPVFI-STSTPVPASGPIP 455
PPS + P + + P+ P S+ A V P + P+ + ST+ PVP P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 456 PADKDAT 476
P K ++
Sbjct: 1051 PVPKSSS 1057
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.22
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 282 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPA 461
+PPSL P+A SLP P A+ PP + + P +PA+ P+PPA
Sbjct: 419 TPPSLP---PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL---PAGMPAAPPLPPA 472
Score = 29.5 bits (63), Expect = 0.30
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 279 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 458
S+PPSL P+A SLP+ P A ++ + PP P + + P+P + P PP
Sbjct: 426 SAPPSLP---PSAPPSLPMGAP-AAPPLPPSAPIAPP----LPAGMPAAPPLPPAAPAPP 477
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 285 PPSL-THNVPAAMDSL--PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIP 455
PPS+ + P + SL P P P+ S+ T S PP S RP+ + P S P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSS--PPNSPPRPIAPVSMNPAINSTSKP 290
Query: 456 P 458
P
Sbjct: 291 P 291
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.9 bits (64), Expect = 0.22
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +3
Query: 162 SMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIGLNSSPPSLTHNVPAAMDSLPIPT 341
+ME PQ + V ST S R N++ P + + +++ PT
Sbjct: 834 NMEEPQHQDSSVVDVSTSASQRGSPVLSDLSKLTGSARNTAEP-VENTSAEPIENTSAPT 892
Query: 342 PLCAISSTTASKVKPPRSSVRPVFIST-STPVPASGPIPPADKD 470
P + A++ P S+ P T STP P P+PP+ +D
Sbjct: 893 PFEIANKQQATE---PISA--PFATETISTPAPVKPPVPPSRRD 931
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.39
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +3
Query: 288 PSLTH----NVPAAMDSLPIP-TPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 452
P L H + AA S P P TP + T++ PPR S+ P +++ P+P+ P
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSA---PPRPSIPPPSPASAPPIPSKAPP 166
Query: 453 PPA 461
P+
Sbjct: 167 IPS 169
Score = 27.1 bits (57), Expect = 1.6
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 285 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 458
PPS P + PIP+ L + A+ VK P S+ P S P+P P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSL-PPPAQPAAPVKSPPSA--PSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 3.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +3
Query: 276 NSSPPSLTHNVPAAMDSLPIPTPLCAISSTTA-----SKVKPPRSSVRPVFISTSTP--- 431
+ +PP + P A + P+ +P A S +A KV PP S PV ++S P
Sbjct: 162 SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSF 221
Query: 432 VPASGPIP 455
P +G P
Sbjct: 222 APPAGHAP 229
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 28.7 bits (61), Expect = 0.52
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 342 PLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPADKDATNHKKKQRT 500
P+ ++ +T+ P + V S+STP PAS PP+ ++ K R+
Sbjct: 594 PVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPASVLAPPSSASLSSSKDANRS 646
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 104 PAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRK 226
P Y DD ++ E V G T +C ++FD TIR+
Sbjct: 488 PTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIFDMTIRE 528
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 285 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPA 440
PP + P + +P+ A S ++S PP + P+ +++ST PA
Sbjct: 946 PPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPA 997
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 270 GLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGP 449
G +S+ P+ +++ +LP P P +++++ + PP V T P ASG
Sbjct: 889 GASSAQPAAMSRT-SSVSTLPPPPPTASMTASAPAIASPPPPKVG----ETYHPPTASGT 943
Query: 450 -IPPADK 467
+PP +
Sbjct: 944 RVPPVQQ 950
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 279 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 458
S P +TH P LP+ T L S + + +SV V + P P P+
Sbjct: 897 SLPTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPPLVS 956
Query: 459 A 461
A
Sbjct: 957 A 957
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 306 VPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 452
+P + +P P P+ + AS PP ++ F+ S PVPA+ P+
Sbjct: 348 LPPSSIQIPPPKPMQKFPANAASSESPPNATGN--FL-PSGPVPANEPM 393
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 3.7
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 288 PSLTHNVPAAMDSLPIPTP-LCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 458
PS++ + + S+ P L ++SS T S P+S+ R ST T PP
Sbjct: 308 PSISKQLSKSSTSIATVAPSLASVSSVTKSPSPTPQSAPRAQSASTETAQDLDFLTPP 365
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 3.7
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 276 NSSPPSLTHNVPAAM-DSLPIPTPLCAISSTTA-SKVKPPRSSVRPVFISTSTPVPAS 443
+++ S +N + + S P TPL + +STTA S P +SV ++++ P S
Sbjct: 268 SATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLS 325
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = +3
Query: 333 IPTPLCAISSTTASKV-------KPPRSSVRPVFISTSTPVPASGPIPPADKDATN 479
IPTP + T+ V P ++ V I TP +S P P + TN
Sbjct: 757 IPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLIDVPTPTASSSPFPSCNTQCTN 812
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 3.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 338 DPSVCNIFYNCIEGEATEVKC 400
+P CN+ Y CIE + C
Sbjct: 176 EPVKCNLCYECIESDELRANC 196
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 279 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPAS 443
SSP S++ ++ ++ L PTP + ++S + SS+ IST P+ +S
Sbjct: 609 SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST-IPISSS 662
Score = 25.4 bits (53), Expect = 4.8
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = +3
Query: 156 NVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXI--GLNSSPPSLTHNVPAAMDSL 329
+ S SP S+ ST+LS I G +S S +P +
Sbjct: 605 SASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLS 664
Query: 330 PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 452
+ + SST S S PV S+S+P+P+S +
Sbjct: 665 TYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSL 705
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 25.4 bits (53), Expect = 4.8
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 469 SLSAGGIGPDAGTGVLVEMKTGRTLDLGGFTFDAVVEDIAHRGVGMGKESIAAG 308
SL+A + +AG GV+V ++G T D TF I+H VG+G + +G
Sbjct: 355 SLNAVRMSYEAGWGVMVSHRSGETAD----TF------ISHLTVGIGAGQLKSG 398
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 4.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 333 IPTPLCAISSTTASKVKPPRSSVRPVFISTST-PVPASGPIPPADKDATN 479
+ TPL S AS + + P+F S+ST P P P P ++ N
Sbjct: 208 VNTPLNQPPSYAASTQPEFQQTTSPIFSSSSTPPPPPPRPSQPTSGESQN 257
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -1
Query: 219 IVGSNTRPSGQSLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIA 76
I+ + PS S +V + L C + + ++ GH NW +A
Sbjct: 137 IISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 6.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Frame = +3
Query: 276 NSSPPSLTHNVPAAMDSLPIP-TPLCAISST--TASKVKPPRSSVRPVFISTSTPV---- 434
N + P +P ++ P +P+ + +T S ++P S P+ + STP+
Sbjct: 415 NLARPKAIKPMPTSIHGQTSPLSPIPPVHTTHGLVSDIRPLPSVSSPIMRADSTPISHNL 474
Query: 435 ---PASGPIP-PADKDATNHK 485
P+ PIP ++K NHK
Sbjct: 475 AVTPSFSPIPQQSNKSIGNHK 495
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 273 LNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTST 428
++S P ++ A SLPI A+ AS + P S +PV + ++T
Sbjct: 231 VSSDNPPVSTAASAYSSSLPISDVTRALPLAPASNSQHPSLSSQPVSVPSNT 282
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 24.6 bits (51), Expect = 8.4
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 279 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 452
S P+ HN+ A P + S+ S V+P S P +IS S+ P GP+
Sbjct: 28 SDSPNRHHNLVDAFMQSP------SYSTQPKSAVEPLGLSFSPGYISPSSQSPHHGPV 79
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 165 STHSKNLSHCLSSSYWPSLAGHLNWALAIAA--TAVNTMNTL 46
S H + +H ++S P+L+ N A+ IA+ +V+ +NTL
Sbjct: 462 SVHRSSTNHSSTNSGSPNLSRRNNLAIPIASRRKSVSAVNTL 503
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 386 WLHLRCSCRRYCTQRGRDGQRIHC 315
W+ L SC+ + G D IHC
Sbjct: 3 WVALSKSCKTHLLDEGLDVSSIHC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,126,822
Number of Sequences: 5004
Number of extensions: 44603
Number of successful extensions: 202
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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