Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309B05f
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 179 7e-46
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 179 7e-46
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 179 7e-46
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 93 1e-19
07_03_1357 - 25982861-25983068,25983354-25983361 61 3e-10
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.15
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 1.4
02_05_1008 - 33461225-33462334 29 1.4
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 1.8
03_06_0069 - 31449319-31450368 28 2.4
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 4.3
09_02_0566 + 10732359-10732497,10733114-10733267,10733448-107335... 27 7.5
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 26 9.9
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 26 9.9
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 26 9.9
02_04_0238 + 21186072-21186883,21187315-21189346 26 9.9
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 26 9.9
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 179 bits (436), Expect = 7e-46
Identities = 84/115 (73%), Positives = 100/115 (86%)
Frame = -3
Query: 403 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 224
K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 67 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 126
Query: 223 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 59
AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 127 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 181
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 179 bits (436), Expect = 7e-46
Identities = 84/115 (73%), Positives = 100/115 (86%)
Frame = -3
Query: 403 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 224
K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 90 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 149
Query: 223 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 59
AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 150 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 204
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 179 bits (436), Expect = 7e-46
Identities = 84/115 (73%), Positives = 100/115 (86%)
Frame = -3
Query: 403 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 224
K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 283 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 342
Query: 223 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 59
AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 343 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 397
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 92.7 bits (220), Expect = 1e-19
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = -3
Query: 403 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 224
K+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH
Sbjct: 56 KNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHH 115
Query: 223 ARILIRQRHI 194
+LIRQ HI
Sbjct: 116 DHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 61.3 bits (142), Expect = 3e-10
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -3
Query: 193 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKN 68
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN 44
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 277 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 152
RRL T + K A+ + A I+Q H+RV + V P+F+V
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 278 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 150
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = -3
Query: 334 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 155
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 154 VRLDSGKHIDFSLKSPFGGGR 92
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 295 IEDFLERRLQTQVFKAGLAKSIHHAR 218
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 223 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 354
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 354 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 268
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
>09_02_0566 +
10732359-10732497,10733114-10733267,10733448-10733519,
10733701-10733769,10734430-10734501,10734590-10734661,
10734769-10734840,10734928-10734999,10735121-10735192,
10735293-10735364,10735435-10735506,10735826-10735897,
10736039-10736104,10736638-10736676,10736787-10736845,
10737166-10737545,10737629-10737824,10738012-10738179,
10738618-10738736,10738873-10739083,10739163-10739403,
10739830-10739980,10740469-10740828
Length = 999
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 220 RILIRQRHIRVRKQVVN--IPSFIVRLDSGKHIDFSLKSPFG 101
R L+ + I +R +N IPS+I +D+ KH+D S G
Sbjct: 281 RELVSMKTIILRNCSINGSIPSYIGNMDNLKHLDLSFNKLTG 322
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 26.2 bits (55), Expect = 9.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 164 WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVL 292
W D M LP QN+G+M+ ASF +LQ ++ + L
Sbjct: 39 WRKSGSRVDPPMVLPQQNAGLMEADGSASFIR-KLQLSVSDGL 80
>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 26.2 bits (55), Expect = 9.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 53 LSLAEVLPLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNL 181
L+L + L +S+ + +EW E N+ ARVQ N D+ L
Sbjct: 1242 LALKTMGGLMSSKQSVSEWEVIAESNIGARVQGKNDVMDILKL 1284
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 26.2 bits (55), Expect = 9.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 220 RILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRV 80
R+L R IRV ++ S ++ D+ K++DF GGG G V
Sbjct: 322 RLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSV 368
>02_04_0238 + 21186072-21186883,21187315-21189346
Length = 947
Score = 26.2 bits (55), Expect = 9.9
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 176 NLLADTNMPLPDQNSGMMDGLRQ-ASFEHLRLQ-TTLQEVLNLQTKHII 316
+L D+N+ LPD G M L+Q +SF+ R T+LQE+ L ++
Sbjct: 647 HLFFDSNIKLPD-GIGEMQSLQQLSSFDVCRSSITSLQELSRLSNLRVL 694
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 26.2 bits (55), Expect = 9.9
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 265 TQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 101
T V G A+S + AR+L+ + +VVN+ ++ S +H+ ++PFG
Sbjct: 2 TPVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLK---RNPFG 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,715,338
Number of Sequences: 37544
Number of extensions: 249028
Number of successful extensions: 738
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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