Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309B04f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 225 6e-58
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 196 3e-49
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 179 4e-44
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 166 2e-40
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 163 3e-39
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 146 2e-34
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 142 6e-33
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 133 3e-30
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 131 8e-30
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 128 1e-28
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 123 2e-27
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 122 7e-27
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 121 9e-27
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 114 1e-24
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 112 5e-24
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 112 5e-24
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 111 1e-23
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 110 2e-23
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 108 9e-23
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 107 2e-22
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 106 4e-22
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 5e-22
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 105 6e-22
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 105 8e-22
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 103 2e-21
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 103 2e-21
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 103 2e-21
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 103 3e-21
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 102 4e-21
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 101 8e-21
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 101 1e-20
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 101 1e-20
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 101 1e-20
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 100 2e-20
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 100 2e-20
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 99 3e-20
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 99 3e-20
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 100 4e-20
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 5e-20
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 99 7e-20
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 99 7e-20
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 98 9e-20
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 98 9e-20
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 98 9e-20
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 98 1e-19
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 98 1e-19
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 98 1e-19
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 98 1e-19
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 97 2e-19
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 97 2e-19
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 97 2e-19
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 97 2e-19
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 97 2e-19
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 97 2e-19
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 97 2e-19
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 97 3e-19
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 96 4e-19
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 96 4e-19
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 95 7e-19
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 95 9e-19
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 95 9e-19
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 95 9e-19
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 95 1e-18
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 94 2e-18
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 94 2e-18
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 94 2e-18
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 94 2e-18
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 94 2e-18
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 94 2e-18
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 93 3e-18
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 93 4e-18
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 93 4e-18
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 93 5e-18
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 93 5e-18
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 93 5e-18
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 93 5e-18
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 93 5e-18
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 5e-18
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 93 5e-18
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 92 6e-18
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 92 6e-18
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 92 8e-18
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 92 8e-18
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 91 1e-17
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 91 1e-17
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 91 1e-17
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 91 1e-17
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 91 1e-17
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 91 1e-17
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 91 1e-17
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 91 1e-17
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 91 2e-17
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 91 2e-17
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 91 2e-17
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 90 2e-17
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 90 2e-17
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 90 2e-17
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 90 2e-17
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 89 4e-17
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 89 4e-17
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 89 6e-17
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 89 6e-17
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 89 6e-17
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 89 6e-17
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 89 6e-17
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 8e-17
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 89 8e-17
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 89 8e-17
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 88 1e-16
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 88 1e-16
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 88 1e-16
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 88 1e-16
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 88 1e-16
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 88 1e-16
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 88 1e-16
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 88 1e-16
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 88 1e-16
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 88 1e-16
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 88 1e-16
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 88 1e-16
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 88 1e-16
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 88 1e-16
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 88 1e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 88 1e-16
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 87 2e-16
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 87 2e-16
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 87 2e-16
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 87 2e-16
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 87 2e-16
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 87 2e-16
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 87 2e-16
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 87 2e-16
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 87 2e-16
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 87 2e-16
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 87 3e-16
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 87 3e-16
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 87 3e-16
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 3e-16
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 3e-16
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 87 3e-16
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 86 4e-16
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 86 4e-16
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 86 4e-16
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 86 4e-16
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 86 4e-16
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 86 4e-16
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 86 4e-16
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 86 4e-16
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 86 5e-16
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 86 5e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 86 5e-16
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 86 5e-16
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 86 5e-16
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 85 7e-16
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 85 7e-16
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 85 7e-16
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 85 7e-16
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 85 7e-16
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 85 7e-16
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 85 7e-16
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 85 9e-16
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 85 9e-16
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 85 9e-16
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 85 9e-16
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 85 9e-16
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 85 9e-16
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 85 9e-16
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 85 9e-16
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 85 9e-16
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 85 9e-16
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 85 9e-16
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 1e-15
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 85 1e-15
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 84 2e-15
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 84 2e-15
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 84 2e-15
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 84 2e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 84 2e-15
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 84 2e-15
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 3e-15
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 83 3e-15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 83 3e-15
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 83 3e-15
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 83 3e-15
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 83 3e-15
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 83 4e-15
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 83 4e-15
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 83 4e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 83 4e-15
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 83 4e-15
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 83 4e-15
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 83 4e-15
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 83 4e-15
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 83 4e-15
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 83 5e-15
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 83 5e-15
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 83 5e-15
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 83 5e-15
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 83 5e-15
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 82 7e-15
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 82 7e-15
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 82 7e-15
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 82 7e-15
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 82 7e-15
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 82 7e-15
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 82 7e-15
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 82 7e-15
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 82 9e-15
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 82 9e-15
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 82 9e-15
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 82 9e-15
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 9e-15
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 81 1e-14
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 1e-14
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 81 2e-14
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 2e-14
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 2e-14
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 81 2e-14
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 81 2e-14
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 81 2e-14
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 81 2e-14
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 81 2e-14
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 81 2e-14
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 81 2e-14
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 81 2e-14
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 81 2e-14
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 81 2e-14
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 81 2e-14
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 81 2e-14
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 2e-14
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 81 2e-14
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 80 3e-14
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 80 3e-14
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 80 3e-14
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 80 3e-14
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 80 3e-14
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 80 3e-14
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 80 3e-14
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 80 3e-14
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 80 3e-14
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 80 3e-14
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 80 3e-14
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 80 3e-14
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 80 3e-14
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 79 5e-14
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 79 5e-14
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 79 5e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 79 5e-14
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 79 5e-14
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 79 5e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 79 5e-14
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 79 5e-14
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 5e-14
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 79 6e-14
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 79 6e-14
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 79 6e-14
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 79 6e-14
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 79 6e-14
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 79 8e-14
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 79 8e-14
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 79 8e-14
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 79 8e-14
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 79 8e-14
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 79 8e-14
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 79 8e-14
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 79 8e-14
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 79 8e-14
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 79 8e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 79 8e-14
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 8e-14
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 78 1e-13
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 78 1e-13
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 78 1e-13
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 78 1e-13
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 78 1e-13
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 78 1e-13
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 78 1e-13
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 78 1e-13
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 1e-13
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 78 1e-13
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 78 1e-13
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 78 1e-13
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 78 1e-13
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 78 1e-13
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 78 1e-13
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 78 1e-13
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 77 2e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 77 2e-13
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 77 2e-13
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 77 2e-13
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 77 2e-13
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 77 2e-13
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 77 2e-13
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 77 2e-13
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 77 2e-13
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 77 2e-13
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 77 2e-13
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 77 3e-13
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 77 3e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 77 3e-13
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 77 3e-13
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 77 3e-13
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 77 3e-13
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 77 3e-13
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 77 3e-13
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 4e-13
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 76 4e-13
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 76 4e-13
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 76 4e-13
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 76 4e-13
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 76 4e-13
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 76 4e-13
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 76 4e-13
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 76 4e-13
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 76 4e-13
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 76 4e-13
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 76 6e-13
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 76 6e-13
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 76 6e-13
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 76 6e-13
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 76 6e-13
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 76 6e-13
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 76 6e-13
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 8e-13
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 75 8e-13
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 75 8e-13
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 75 1e-12
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 75 1e-12
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 75 1e-12
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 75 1e-12
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 75 1e-12
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 1e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 1e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 75 1e-12
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 75 1e-12
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 75 1e-12
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 75 1e-12
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 75 1e-12
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 75 1e-12
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 75 1e-12
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 75 1e-12
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 75 1e-12
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 75 1e-12
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 74 2e-12
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 74 2e-12
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 74 2e-12
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 74 2e-12
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 74 2e-12
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 74 2e-12
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 74 2e-12
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 73 3e-12
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 73 3e-12
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 73 3e-12
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 73 3e-12
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 73 3e-12
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 73 3e-12
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 3e-12
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 73 3e-12
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 73 3e-12
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 73 3e-12
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 73 4e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 73 4e-12
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 73 4e-12
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 73 4e-12
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 73 4e-12
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 73 4e-12
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 73 4e-12
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 73 4e-12
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 5e-12
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 73 5e-12
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 73 5e-12
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 73 5e-12
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 73 5e-12
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 5e-12
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 73 5e-12
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 73 5e-12
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 73 5e-12
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 72 7e-12
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 7e-12
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 72 7e-12
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 72 7e-12
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 72 7e-12
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 72 7e-12
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 72 7e-12
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 72 7e-12
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 72 7e-12
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 9e-12
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 72 9e-12
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 72 9e-12
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 72 9e-12
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 72 9e-12
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 72 9e-12
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 72 9e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 72 9e-12
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 71 1e-11
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 71 1e-11
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 1e-11
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 71 1e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 71 1e-11
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 71 1e-11
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 71 1e-11
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 71 1e-11
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 71 1e-11
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 71 1e-11
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 71 2e-11
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 71 2e-11
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 71 2e-11
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 71 2e-11
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 71 2e-11
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 71 2e-11
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 71 2e-11
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 71 2e-11
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 71 2e-11
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 71 2e-11
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 71 2e-11
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 71 2e-11
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 71 2e-11
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 2e-11
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 2e-11
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 2e-11
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 71 2e-11
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 3e-11
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 70 3e-11
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 70 3e-11
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 70 3e-11
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 70 3e-11
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 70 3e-11
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 70 3e-11
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 70 3e-11
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 70 3e-11
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 70 3e-11
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 70 3e-11
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 70 3e-11
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 70 4e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 70 4e-11
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 70 4e-11
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 70 4e-11
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 70 4e-11
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 70 4e-11
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 70 4e-11
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 4e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 69 5e-11
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 5e-11
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 69 5e-11
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 69 5e-11
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 69 5e-11
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 69 5e-11
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 69 5e-11
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 69 7e-11
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 7e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 69 7e-11
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 69 7e-11
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 69 7e-11
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 69 7e-11
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 69 7e-11
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 69 7e-11
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 69 7e-11
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 9e-11
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 69 9e-11
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 69 9e-11
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 69 9e-11
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 69 9e-11
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 69 9e-11
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 69 9e-11
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 69 9e-11
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 69 9e-11
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 69 9e-11
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 68 1e-10
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 68 1e-10
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 68 1e-10
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 68 1e-10
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 68 1e-10
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 68 1e-10
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 68 1e-10
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 68 1e-10
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 225 bits (549), Expect = 6e-58
Identities = 105/156 (67%), Positives = 133/156 (85%), Gaps = 3/156 (1%)
Frame = +3
Query: 57 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 230
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 231 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 410
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 411 IALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVV 515
+ALGD++ A CHACIGGTNVR ++++L++ H+VV
Sbjct: 122 LALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVV 157
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 196 bits (477), Expect = 3e-49
Identities = 94/125 (75%), Positives = 108/125 (86%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 498 GVHVV 512
G HVV
Sbjct: 156 GQHVV 160
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 179 bits (435), Expect = 4e-44
Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
Frame = +3
Query: 87 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 263
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 264 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 407
VIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 166 bits (404), Expect = 2e-40
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Frame = +3
Query: 66 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 242
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 243 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 395
PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 68 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 163 bits (395), Expect = 3e-39
Identities = 74/134 (55%), Positives = 102/134 (76%)
Frame = +3
Query: 117 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 296
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 297 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
T TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN + CIGGT+ +E
Sbjct: 107 TGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQE 166
Query: 477 DIRQLESGVHVVVA 518
+ + GVH+++A
Sbjct: 167 TREKCKQGVHIIIA 180
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 147 bits (355), Expect = 2e-34
Identities = 65/108 (60%), Positives = 88/108 (81%)
Frame = +3
Query: 123 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 302
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 303 TFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 446
F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 329 MFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 142 bits (343), Expect = 6e-33
Identities = 77/125 (61%), Positives = 91/125 (72%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+LQ +D IQ ++ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLD--------------------IQG-LLALGDYMNVQCHACIGGTNVGEDIRKLDY 134
Query: 498 GVHVV 512
G HVV
Sbjct: 135 GQHVV 139
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 133 bits (321), Expect = 3e-30
Identities = 64/92 (69%), Positives = 79/92 (85%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIA 416
LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 131 bits (317), Expect = 8e-30
Identities = 63/123 (51%), Positives = 83/123 (67%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++ + + QALI+ PTRELA Q +VV LG H C GGTN+R+DI +L VH
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 507 VVV 515
++V
Sbjct: 167 ILV 169
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 128 bits (308), Expect = 1e-28
Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 75 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 254
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 255 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 431
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP 132
Query: 432 NAKCHACIGGTNVREDIRQLESGVHVVV 515
N + GGT +R+DI +L+ VH++V
Sbjct: 133 NLQVMITTGGTTLRDDILRLQQPVHILV 160
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 123 bits (297), Expect = 2e-27
Identities = 56/126 (44%), Positives = 85/126 (67%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+L D S+++ Q LIL TR+L ++ +++ALG LN HAC G ++++DI ++
Sbjct: 80 VLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDISVVQQ 139
Query: 498 GVHVVV 515
GV +V+
Sbjct: 140 GVQIVL 145
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 122 bits (293), Expect = 7e-27
Identities = 59/97 (60%), Positives = 72/97 (74%)
Frame = +3
Query: 156 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 335
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 336 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 446
+ +CQAL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 76 EELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 121 bits (292), Expect = 9e-27
Identities = 59/124 (47%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
ID QAL+L PTRELA Q+ ++ I + HL K A GGTN+R+DI +L+ VH
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 507 VVVA 518
VV+A
Sbjct: 211 VVIA 214
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 114 bits (274), Expect = 1e-24
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++ R QAL+L PTRELA Q+ + + +G H K A GG ++ IR L GV
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 507 VVV 515
VV+
Sbjct: 127 VVI 129
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 112 bits (269), Expect = 5e-24
Identities = 55/123 (44%), Positives = 78/123 (63%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+D SI Q L++APTRELA QI + LG + +K +GG + + L SGV++
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 510 VVA 518
VVA
Sbjct: 123 VVA 125
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 112 bits (269), Expect = 5e-24
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 497
LQ+ID + R QAL+L PTRELA Q+ + AL HL + + GG + L
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRR 123
Query: 498 GVHVVV 515
G VVV
Sbjct: 124 GAQVVV 129
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 111 bits (266), Expect = 1e-23
Identities = 60/132 (45%), Positives = 81/132 (61%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 300 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 479
F+++ LQ D S Q L+LA TRE+A Q LG + A+ GG+ + D
Sbjct: 90 GAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAAD 149
Query: 480 IRQLESGVHVVV 515
LE H+VV
Sbjct: 150 KVALEKKPHIVV 161
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 110 bits (265), Expect = 2e-23
Identities = 53/124 (42%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
+D QA+++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+ +L+ H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 507 VVVA 518
VV+A
Sbjct: 203 VVIA 206
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 108 bits (259), Expect = 9e-23
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 330 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
D S + +ALILAPTRELA Q+ + ++ LG H GG + IR L++GV
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 504 HVVV 515
+VV
Sbjct: 126 DIVV 129
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 107 bits (257), Expect = 2e-22
Identities = 53/126 (42%), Positives = 83/126 (65%)
Frame = +3
Query: 135 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 314
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
L ++ + + + +I++PTRELA Q + + +LG A AC+GG ++ D++ L+
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVKALQ 132
Query: 495 SGVHVV 512
G+H V
Sbjct: 133 KGIHCV 138
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 106 bits (254), Expect = 4e-22
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 317
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
IL+ ID S R QALILAPTRELA Q+ + + ++ GG ++ IR+L
Sbjct: 61 ILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR 120
Query: 498 GVHVVV 515
GV +VV
Sbjct: 121 GVQIVV 126
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (253), Expect = 5e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +3
Query: 183 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 362
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QAL
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 363 ILAPTRELAQQ-IQKVVIALGDHL 431
ILAPTRELAQQ I ++ LG +L
Sbjct: 107 ILAPTRELAQQTITRIFFILGVNL 130
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 399 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
+KV++ LG+ L +AC GGT+ +ED ++L GV VVV
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVV 224
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 105 bits (252), Expect = 6e-22
Identities = 51/133 (38%), Positives = 81/133 (60%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 300 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 479
A F+I IL ++ A ILAPTRELAQQI++ +LG + + +GG N+ +
Sbjct: 133 AAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQ 192
Query: 480 IRQLESGVHVVVA 518
R L H+++A
Sbjct: 193 ARDLMRKPHIIIA 205
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 105 bits (251), Expect = 8e-22
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 327 QIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
++ I R ++LIL PTRELA QIQ+ A G HL + GG + + +L+
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 498 GVHVVVA 518
GV ++VA
Sbjct: 122 GVDILVA 128
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 103 bits (248), Expect = 2e-21
Identities = 46/123 (37%), Positives = 75/123 (60%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++DT Q +++APTRELA Q+ + + +G H + GG ++ IR L+ H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 507 VVV 515
++V
Sbjct: 123 IIV 125
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 103 bits (247), Expect = 2e-21
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 323
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESG 500
Q ID S + Q LI+APTREL QI + H+ + A GG+N++E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 501 VHVVVA 518
+VVA
Sbjct: 122 AQIVVA 127
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 103 bits (247), Expect = 2e-21
Identities = 58/120 (48%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = +3
Query: 81 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 251
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 252 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 431
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 129 SNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 103 bits (246), Expect = 3e-21
Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 300 ATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 470
A F++ +L ++ T QAL+L PTRELA Q+ + + G L A+ GG +
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPI 168
Query: 471 REDIRQLESGVHVVVA 518
+R L GV VVVA
Sbjct: 169 GRQVRALVQGVDVVVA 184
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 102 bits (245), Expect = 4e-21
Identities = 52/122 (42%), Positives = 75/122 (61%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ T R QALIL PTRELA Q+ + L H + GG ++ I+ L+ GV V
Sbjct: 68 VSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQV 126
Query: 510 VV 515
V+
Sbjct: 127 VI 128
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 101 bits (243), Expect = 8e-21
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 314
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QSGTGKTATF +
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLL 134
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKV 407
++L +I T + CQ L +APTRELA QI+ V
Sbjct: 135 AMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 101 bits (242), Expect = 1e-20
Identities = 48/122 (39%), Positives = 73/122 (59%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
I R +ALIL PTRELA Q+ + L H K A GG ++++ LE G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 510 VV 515
+V
Sbjct: 151 IV 152
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 101 bits (242), Expect = 1e-20
Identities = 47/123 (38%), Positives = 77/123 (62%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+I R AL++ PTRELA Q+ + AL H + A GG ++ E +++LE+G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 507 VVV 515
++V
Sbjct: 141 IIV 143
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 101 bits (242), Expect = 1e-20
Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 314
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 434
++L +ID + CQ L +APTREL QI +V I + +N
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 100 bits (240), Expect = 2e-20
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 2/128 (1%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 491
I Q+IDTS RE QA+ILAPT ELA QI K + L + ++ IG NV+ I +L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 492 ESGVHVVV 515
+ HV+V
Sbjct: 121 KEKPHVIV 128
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 100 bits (240), Expect = 2e-20
Identities = 51/126 (40%), Positives = 79/126 (62%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GKTA F+I I
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
LQ + T+ + AL+LAPTRELA QI++ ALG + + IGG ++ E R L
Sbjct: 157 LQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRK 216
Query: 501 VHVVVA 518
HV++A
Sbjct: 217 PHVIIA 222
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 99 bits (238), Expect = 3e-20
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GV 503
Q+ + L+L TRELA QI+ LG N K A GG DI L++
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 504 HVVVA 518
H++VA
Sbjct: 159 HILVA 163
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 99 bits (238), Expect = 3e-20
Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Frame = +3
Query: 24 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 200
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 10 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 66
Query: 201 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 380
+KPSA+ QR I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 67 DLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTH 124
Query: 381 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
+LA + Q V+ LG L+AK HA GGT+ ED + L +GV V V
Sbjct: 125 DLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAV 169
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 99.5 bits (237), Expect = 4e-20
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 321 LQQIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
L+Q+D+ R+ QA+++ PTRELA Q+ L + + GG N+ +RQLE
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLE 162
Query: 495 SGVHVVV 515
+G +VV
Sbjct: 163 NGTQLVV 169
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 99.1 bits (236), Expect = 5e-20
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 503
++D RE Q L+LAPTRELAQQ+ + G + + + GG RE + L G
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGA 129
Query: 504 HVVV 515
V+V
Sbjct: 130 QVIV 133
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 98.7 bits (235), Expect = 7e-20
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 327 Q-IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ + T + L++APTRELA QI +LG + + GG N+ + IR+L SGV
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 504 HVVVA 518
VVVA
Sbjct: 122 DVVVA 126
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 98.7 bits (235), Expect = 7e-20
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
ID +R QAL+L PTRELAQQ+ + + G + + + GG ++R+ ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 507 VVVA 518
+VVA
Sbjct: 131 IVVA 134
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 98.3 bits (234), Expect = 9e-20
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVH 506
+RE Q L+LAPTRELAQQ+ V + H N K + GG++ R L+ G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 507 VVV 515
VV
Sbjct: 128 WVV 130
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 98.3 bits (234), Expect = 9e-20
Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 317
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 440
+L +D SI QA+ ++PT+ELA Q +V+ +G N K
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 98.3 bits (234), Expect = 9e-20
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
+D ++ Q L+LAPTRELA Q+ + + H+ A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 504 HVVV 515
+VV
Sbjct: 127 QIVV 130
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/123 (37%), Positives = 75/123 (60%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++D + QA++L PTRELA Q+ + + + A GG ++ + QL+ GVH
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 507 VVV 515
+VV
Sbjct: 124 IVV 126
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 97.9 bits (233), Expect = 1e-19
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 317
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 494
+L ID + RE QALILAPTRELAQQI + + HL GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 495 SGVHVVVA 518
G ++VA
Sbjct: 132 RGAQIIVA 139
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/123 (38%), Positives = 75/123 (60%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+++ QAL++APTRELA Q+ + + +G + GG ++ IR L+ H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 507 VVV 515
V+V
Sbjct: 123 VIV 125
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/110 (42%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 314
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 464
++L ++D +I QA+ +AP+RELA+QIQ+V+ +G I G+
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 97.5 bits (232), Expect = 2e-19
Identities = 55/148 (37%), Positives = 84/148 (56%)
Frame = +3
Query: 75 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 254
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 255 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 434
G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 82 GKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGR 140
Query: 435 AKCHACIGGTNVREDIRQLESGVHVVVA 518
K GG +++ LE ++A
Sbjct: 141 IKTICMYGGQSIKRQCDLLEKKPKAMIA 168
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/123 (40%), Positives = 71/123 (57%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
ID S + QAL+LAPTRELAQQ+ + GG++ + + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 507 VVV 515
VVV
Sbjct: 176 VVV 178
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 506
IDTSI++ Q ++LAPTRELA Q+ + + + G D + GG + +QLE G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
Query: 507 VVV 515
VVV
Sbjct: 137 VVV 139
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 97.5 bits (232), Expect = 2e-19
Identities = 47/123 (38%), Positives = 74/123 (60%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+I+ QA+++APTRELA Q+ + + +G AK GG ++ IR L+ +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 507 VVV 515
++V
Sbjct: 124 IIV 126
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 327 QIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 488
+ T R +ALIL PTRELA QI + V +LN + GG ++ + +
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 489 LESGVHVVVA 518
L GV V+VA
Sbjct: 122 LRGGVDVLVA 131
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 97.1 bits (231), Expect = 2e-19
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
++ S + QA+++APTRELA Q+ + LG ++ K GG ++ + +R L+SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 507 VVV 515
+VV
Sbjct: 148 IVV 150
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 97.1 bits (231), Expect = 2e-19
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 323
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESG 500
QQI+ S+++ Q L+L PTREL QQ+ K + ++ A GG + E I++LE+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 501 VHVVVA 518
H++VA
Sbjct: 122 KHILVA 127
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 96.7 bits (230), Expect = 3e-19
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 300 ATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
F I L+ + DT Q LIL PTRELA Q+ V L +GGT+ R
Sbjct: 79 LAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERN 138
Query: 477 DIRQLESGVHVVVA 518
I+ + SG VVVA
Sbjct: 139 QIQSIRSGARVVVA 152
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 96.3 bits (229), Expect = 4e-19
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 503
ID I Q +ILAPTRE+A QI++V+ +LG + K + IGG + D ++L S
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKL-SNC 143
Query: 504 HVVV 515
H+ +
Sbjct: 144 HIAI 147
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 96.3 bits (229), Expect = 4e-19
Identities = 41/124 (33%), Positives = 79/124 (63%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
I+ QALI+ PTRELA Q++ + +G +C A G ++++ I +L+ VH
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 507 VVVA 518
+VVA
Sbjct: 124 IVVA 127
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 95.5 bits (227), Expect = 7e-19
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Frame = +3
Query: 78 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 245
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 246 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRELAQQIQKVVIA 416
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 417 LGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
G L GG + + +R L+ GV VVVA
Sbjct: 130 YGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVA 163
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 95.1 bits (226), Expect = 9e-19
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIA-LGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+++ + Q L+LAPTRELA Q+ A H + K A GGT+ R I L GV
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 507 VVV 515
VVV
Sbjct: 193 VVV 195
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 95.1 bits (226), Expect = 9e-19
Identities = 49/125 (39%), Positives = 73/125 (58%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
LQ+I ++ Q LI+ PTRELA Q+ V LG +L + A GG + IR L G
Sbjct: 61 LQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQG 119
Query: 501 VHVVV 515
V V+V
Sbjct: 120 VEVIV 124
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 95.1 bits (226), Expect = 9e-19
Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 491
I Q+ID+S RE QALILAPT EL QI K + L + L IG N+ I +L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 492 ESGVHVVV 515
+ H++V
Sbjct: 121 KEKPHIIV 128
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 94.7 bits (225), Expect = 1e-18
Identities = 46/123 (37%), Positives = 73/123 (59%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
++ R QALI+ PTREL Q+ + + +G ++ K A GG ++ I QL GVHV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 510 VVA 518
+VA
Sbjct: 125 IVA 127
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 94.3 bits (224), Expect = 2e-18
Identities = 49/132 (37%), Positives = 78/132 (59%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 300 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 479
A F+I ILQ++ + +LILAPTREL+ QI++ +I+LG + +GG ++
Sbjct: 93 AAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQ 152
Query: 480 IRQLESGVHVVV 515
QL H++V
Sbjct: 153 ALQLSKKPHIIV 164
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/122 (36%), Positives = 76/122 (62%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
I + + Q L++ PTRELA Q+ + + +G + A GG + R ++ LE H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 510 VV 515
VV
Sbjct: 124 VV 125
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 93.9 bits (223), Expect = 2e-18
Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 317
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLE 494
+LQQID R Q+LIL PTREL QI + +++ K GG+++ IR L+
Sbjct: 61 LLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK 120
Query: 495 SGVHVVVA 518
GVH++VA
Sbjct: 121 RGVHIIVA 128
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+D SI + Q+LIL PTRELA Q+ + L + A GG ++ IR L++G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 507 VVV 515
+VV
Sbjct: 123 IVV 125
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 93.9 bits (223), Expect = 2e-18
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 320
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 321 LQQIDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
L++ D I + C+ L+LAPTREL QI G K + +GGT+V +D +L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 495 SGVHVVVA 518
G +++A
Sbjct: 124 RGTDILIA 131
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 93.9 bits (223), Expect = 2e-18
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 321 LQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDI 482
LQ + IR AL+LAPTRELAQQI+K V A L + K +GGTN+ +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQR 236
Query: 483 RQLESGVHVVVA 518
+L +GV + VA
Sbjct: 237 SELRAGVEIAVA 248
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 93.5 bits (222), Expect = 3e-18
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 327 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
++ R +A+I+ PTRELA+QIQ V+ ALG + + GG + I++L GV
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 504 HVVV 515
+ V
Sbjct: 122 EIAV 125
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 93.1 bits (221), Expect = 4e-18
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 318 ILQQI------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 479
++Q + +T+ + +ALILAPTRELAQQ+ + H GGT++R
Sbjct: 61 LIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQ 120
Query: 480 IRQLESGVHVVVA 518
QL GV +++A
Sbjct: 121 QEQLAKGVDILIA 133
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 93.1 bits (221), Expect = 4e-18
Identities = 57/167 (34%), Positives = 88/167 (52%)
Frame = +3
Query: 18 SERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 197
S+ +D P K+ P+ D+ + T+ D +V F D+ + +++
Sbjct: 68 SDHDDDDDPSADKDSPAADEEQDE----KKVATIADDGKKV--EFSDLGVIPQIVEACTN 121
Query: 198 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 377
GF+ P+ IQ +AI +Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPT
Sbjct: 122 MGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPT 181
Query: 378 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
RELA QI + V ALG + + +GG ++ L HV+VA
Sbjct: 182 RELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVA 228
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 92.7 bits (220), Expect = 5e-18
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 330 IDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++T S ++LI+ PTRELA Q KV LG N K IGG+ + + L SG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 507 VVVA 518
++VA
Sbjct: 135 IIVA 138
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 92.7 bits (220), Expect = 5e-18
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 183
Query: 507 VVV 515
+ V
Sbjct: 184 IAV 186
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 92.7 bits (220), Expect = 5e-18
Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
I+ QALIL PTRELA Q+ + LG L K A GG + RE LE+GV
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 507 VVV 515
+VV
Sbjct: 169 IVV 171
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 92.7 bits (220), Expect = 5e-18
Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 327 QI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
++ T R+ +AL+L PTRELA QI + A G + K GG + L SG
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 501 VHVVVA 518
+ ++VA
Sbjct: 122 IQILVA 127
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 92.7 bits (220), Expect = 5e-18
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Frame = +3
Query: 126 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 305
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 306 FSISILQQIDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 470
F + IL +I + R C+AL+LAPTRELA QI G IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 471 REDIRQLESGVHVVVA 518
R++ESGV ++VA
Sbjct: 171 GPQARRMESGVDLLVA 186
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 92.7 bits (220), Expect = 5e-18
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
+IDT+ + QAL+L PTRELA Q+ + + N GG ++R +R L+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 504 HVVV 515
V+V
Sbjct: 126 QVIV 129
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 92.7 bits (220), Expect = 5e-18
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 182
Query: 507 VVV 515
+ V
Sbjct: 183 IAV 185
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 92.3 bits (219), Expect = 6e-18
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 330 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESG 500
+D + R+ Q L+LAPTRELA Q+ + A ++ ACI GG IR L+ G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 501 VHVVV 515
V VVV
Sbjct: 129 VKVVV 133
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 92.3 bits (219), Expect = 6e-18
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 320
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 321 LQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
L++ID + +A+I+ PTRELA QI + + +L K GG ++ + + LE
Sbjct: 78 LERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEK 137
Query: 498 GVHVVV 515
GV +VV
Sbjct: 138 GVDIVV 143
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 91.9 bits (218), Expect = 8e-18
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 326
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGV 503
+ID + R QALIL+PTREL QI + + A GG ++ E R ++ G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 504 HVVVA 518
++VA
Sbjct: 124 QIIVA 128
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 91.9 bits (218), Expect = 8e-18
Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+SG GKTA F +S+L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 330 ID--TSIRECQALILAPTRELAQQIQK----VVIALGDHLNAKCHACIGGTNVREDIRQL 491
ID + + QAL+L T ELA QI K I L D + K IGG V +R L
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPD-IKDKILCAIGGVTVSLHVRAL 248
Query: 492 ES 497
+S
Sbjct: 249 KS 250
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 317
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+++ ID+++++ QAL+L+PTRELA Q+ + + LG + GG + R I ++
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 498 GVHVVVA 518
G H+VVA
Sbjct: 163 GAHIVVA 169
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 91.5 bits (217), Expect = 1e-17
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 327 ----QIDTSI----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 482
Q +TS +ALIL PTRELA Q+ V A H + GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 483 RQLESGVHVVVA 518
+L GV +++A
Sbjct: 132 AELRRGVEILIA 143
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 330 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ T R+ +ALIL PTRELA QI + ++ + + +GG N R +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 504 HVVVA 518
++VVA
Sbjct: 124 NIVVA 128
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 327 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + + +AL+L PTRELA Q+ + V G HL+ K GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 495 SGVHVVVA 518
G +++A
Sbjct: 126 RGADILIA 133
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/126 (36%), Positives = 72/126 (57%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
I Q +D + QAL+L PTRELA Q+++ + +G K A G ++L+
Sbjct: 62 ICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQ 121
Query: 498 GVHVVV 515
HVVV
Sbjct: 122 KTHVVV 127
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 91.5 bits (217), Expect = 1e-17
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
ID QAL+LAPTRELA Q+ + ++ GG + + L GVH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 507 VVV 515
VVV
Sbjct: 129 VVV 131
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 91.5 bits (217), Expect = 1e-17
Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESG 500
+++D + QAL+L+PTRELA Q + L + GG + +R L+
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGT 124
Query: 501 VHVVV 515
V VV+
Sbjct: 125 VQVVI 129
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 91.1 bits (216), Expect = 1e-17
Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 312 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQ 488
+ ILQ + I QALILAPTRELA Q+ + L + N GG ++Q
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQ 121
Query: 489 LESGVHVVV 515
L SG VVV
Sbjct: 122 LRSGAQVVV 130
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 91.1 bits (216), Expect = 1e-17
Identities = 45/127 (35%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA--CIGGTNVREDIRQLE 494
+++ID S E QA+IL+PT EL QI V+ L L K + +G N++ + +L+
Sbjct: 61 IEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLK 120
Query: 495 SGVHVVV 515
+ H++V
Sbjct: 121 NKPHILV 127
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 91.1 bits (216), Expect = 1e-17
Identities = 49/125 (39%), Positives = 72/125 (57%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++G+GKTA+F+I IL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
Q+ A+IL PTRELA QI + A+G +N C IGG + L+
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 504 HVVVA 518
H++VA
Sbjct: 124 HIIVA 128
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 91.1 bits (216), Expect = 1e-17
Identities = 49/126 (38%), Positives = 70/126 (55%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
ILQ++ + ALILAPTREL QI + ++A+G L +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 498 GVHVVV 515
HVVV
Sbjct: 169 KPHVVV 174
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 91.1 bits (216), Expect = 1e-17
Identities = 46/95 (48%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 317
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 422
+L +++ QA+ LAP+RELA+Q +VV +G
Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 90.6 bits (215), Expect = 2e-17
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 327 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
Q+ S + +ALI APTRELA+QI + A + N A GG + R L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 492 ESGVHVVVA 518
E+GV ++VA
Sbjct: 122 ENGVDILVA 130
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 90.6 bits (215), Expect = 2e-17
Identities = 49/124 (39%), Positives = 73/124 (58%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
++ QAL+L PTRELA Q+ + + +L + + A GG ++ +R L
Sbjct: 64 NRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNP 122
Query: 504 HVVV 515
++V
Sbjct: 123 EIIV 126
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 90.6 bits (215), Expect = 2e-17
Identities = 56/125 (44%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVR--EDIRQLESG 500
I+ S + AL+L TRELA QI + +L + K GG N++ +D+ + E
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC- 166
Query: 501 VHVVV 515
H+VV
Sbjct: 167 PHIVV 171
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 90.2 bits (214), Expect = 2e-17
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 327 QI----DTSI----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 482
++ +TS+ +ALI+APTRELA QI + V G +L + GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 483 RQLESGVHVVVA 518
L++GV ++VA
Sbjct: 126 AALQAGVEILVA 137
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 90.2 bits (214), Expect = 2e-17
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 497
L ++D +++ Q L+LAPTRELA Q+ + +L GG ++ +RQL
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 498 GVHVVV 515
G HV+V
Sbjct: 163 GAHVIV 168
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 90.2 bits (214), Expect = 2e-17
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
QID S + Q L++APTRELA Q+ + + GG +R L+ G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 504 HVVV 515
VVV
Sbjct: 126 QVVV 129
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 90.2 bits (214), Expect = 2e-17
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+ Q L+LAPTRE+A QI VV+A+G + +CH IGG + +D + L+ H
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-CH 146
Query: 507 VVV 515
+ +
Sbjct: 147 IAI 149
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 89.4 bits (212), Expect = 4e-17
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
ID + RE Q LILAPTRELA Q+ L A GG + ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 507 VVVA 518
++VA
Sbjct: 145 ILVA 148
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 89.4 bits (212), Expect = 4e-17
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
ID+ QA+IL PTRELA Q+ + + L +L GG + I+ L+ GV
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 507 VVV 515
+++
Sbjct: 126 III 128
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 89.0 bits (211), Expect = 6e-17
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 327 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + + +L+L PTRELA Q++ A +L + A GG ++R +++L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 495 SGVHVVVA 518
GV ++VA
Sbjct: 145 GGVDILVA 152
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 89.0 bits (211), Expect = 6e-17
Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 327 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
++ S + L+L PTRELA+Q+ + IA G L+ + A GG ++ + +L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 492 ESGVHVVVA 518
GV V+VA
Sbjct: 122 RKGVDVLVA 130
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 89.0 bits (211), Expect = 6e-17
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 330 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
I R +A+IL+PTRELA QI + ++ G L IGG +R+ +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 495 SGVHVVVA 518
GV ++VA
Sbjct: 225 KGVDILVA 232
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 89.0 bits (211), Expect = 6e-17
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +3
Query: 159 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 332
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 89.0 bits (211), Expect = 6e-17
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 330 I--DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ I + L+L+PTREL+ QI + AL L+ + A +GG ++ + L S
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 504 HVVVA 518
VVVA
Sbjct: 144 DVVVA 148
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 88.6 bits (210), Expect = 8e-17
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
Frame = +3
Query: 126 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 305
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 306 FS---ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
F+ I++L + R ++L+L PTRELA Q+ + H+ IGG + +E
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKE 124
Query: 477 DIRQLESGVHVVVA 518
+ ++ GV V++A
Sbjct: 125 QEQAIDKGVDVLIA 138
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 88.6 bits (210), Expect = 8e-17
Identities = 46/125 (36%), Positives = 70/125 (56%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
Q+ SI Q LIL PTREL+ QI+ V L + +C GG + ED++ L+
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 501 VHVVV 515
H +V
Sbjct: 129 FHGIV 133
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 88.6 bits (210), Expect = 8e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A++G+GKTA F++
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP 134
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
IL ++ AL LAPTRELA Q+ + ALG L +C A IGG + + L
Sbjct: 135 ILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLAR 194
Query: 498 GVHVVVA 518
HVVVA
Sbjct: 195 RPHVVVA 201
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 330 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ R+ + LIL PTRELA QI + + A HLN K GG +R L+
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 495 SGVHVVVA 518
GV +++A
Sbjct: 126 GGVDILIA 133
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 88.2 bits (209), Expect = 1e-16
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+++ L LL + G ++PS IQ +AI P ++G+DV+ +Q+G+GKTA F + +LQ+
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 330 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ + +ALIL PTRELA Q V LG L+ K GGT+ + ++ + GV
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGV 141
Query: 504 HVVVA 518
++VA
Sbjct: 142 DIIVA 146
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 88.2 bits (209), Expect = 1e-16
Identities = 45/123 (36%), Positives = 71/123 (57%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ ++ Q LIL P REL +QI + I LG L A + G +++ G V
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGAQV 126
Query: 510 VVA 518
+ A
Sbjct: 127 ISA 129
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 317
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
I+Q+I+ +++ QALIL PTRELA Q+ + + + GG + + R L+
Sbjct: 61 IVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKK 120
Query: 498 GVHVVVA 518
GV +VVA
Sbjct: 121 GVDLVVA 127
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 321 LQQI--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
L I DT AL++APTREL QQI+K H + + +GG ++ +
Sbjct: 472 LIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIED 531
Query: 477 DIRQLESGVHVVVA 518
Q+ G +++A
Sbjct: 532 QAYQVSKGCEIIIA 545
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 87.8 bits (208), Expect = 1e-16
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +3
Query: 135 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 314
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 315 SILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 488
+LQQ+ + + +ALIL+PTR+LA QI + G + +C GG N +
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 489 LESGVHVVVA 518
L GV ++VA
Sbjct: 130 LTGGVDIIVA 139
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 87.8 bits (208), Expect = 1e-16
Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Frame = +3
Query: 114 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 293
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 294 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 470
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N K + IGG +
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPL 133
Query: 471 REDIRQLESGVHVVV 515
+D+++ S H+ V
Sbjct: 134 EDDLKK-SSKCHIAV 147
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 87.8 bits (208), Expect = 1e-16
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 330 IDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
+ S R ++LIL PTRELA Q+ + G +L IGG ++ E L G
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRG 412
Query: 501 VHVVVA 518
V V++A
Sbjct: 413 VDVLIA 418
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 87.8 bits (208), Expect = 1e-16
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+ + L++EL+ I G+ + IQ+ AI + D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 327 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
++ T ++ ++LI+ PTRELA Q+ V LN + A GG + I QL+
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 495 SGVHVVVA 518
GV V++A
Sbjct: 122 EGVDVLIA 129
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
+ Q LIL PTREL +Q+ K + L + N K + GG R ++ + G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 507 VVV 515
+VV
Sbjct: 126 IVV 128
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 87.8 bits (208), Expect = 1e-16
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 326
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++D + QAL+L PTRELA Q+ + +L + GG ++ IR L+ V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 507 VVV 515
+VV
Sbjct: 124 LVV 126
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/117 (36%), Positives = 68/117 (58%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D+ +L++ IY YGFE PS +QQ +I IQG+ + AQ+G+GKTA F IS+L
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSL 64
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
++ CQA+I++PT+EL+ Q +V+ LG + G +E ++ G
Sbjct: 65 VNPQKSICQAVIISPTKELSNQTLEVINTLGTRSGIRGVCLTSGVMAKEQFEKITKG 121
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/86 (44%), Positives = 61/86 (70%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 330 IDTSIRECQALILAPTRELAQQIQKV 407
+D QA+++ PTRELA Q+ ++
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 87.8 bits (208), Expect = 1e-16
Identities = 48/123 (39%), Positives = 72/123 (58%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
I Q LI+APTRELA QI + V + + A GG ++ + L+ G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 510 VVA 518
+VA
Sbjct: 123 LVA 125
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 87.8 bits (208), Expect = 1e-16
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 330 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
++ S C L++ TRELA QI K ++ K GG +++D L+SG
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 504 -HVVV 515
H+VV
Sbjct: 163 PHIVV 167
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 87.8 bits (208), Expect = 1e-16
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 314
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 422
++L +++ Q L LAPT ELA Q +VV +G
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 87.4 bits (207), Expect = 2e-16
Identities = 45/126 (35%), Positives = 70/126 (55%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ TFD + +K+ LL + +G KP+ IQQ I P + +V+ A++G+GKTA F++ I
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
+ + T AL+L PTRELA QI A G +N + +GG +V + L
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRILHHLSGS 148
Query: 501 VHVVVA 518
HV++A
Sbjct: 149 PHVIIA 154
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 87.4 bits (207), Expect = 2e-16
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 327 QIDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+ T + R +ALIL+PTRELA QI + + L + GG +VR I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 492 ESGVHVVVA 518
GV ++VA
Sbjct: 125 ARGVDILVA 133
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 87.4 bits (207), Expect = 2e-16
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 312 ISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 482
+ +L+++ D+ R + LIL PTRELA Q Q V+ L N +GG + +
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 483 RQLESGVHVVVA 518
+L VV+A
Sbjct: 306 VELRKSPDVVIA 317
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 87.4 bits (207), Expect = 2e-16
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +3
Query: 138 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 317
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGKT ++
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCG 108
Query: 318 ILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 455
+L +T I E Q +++ PTREL+ Q+ +V+ L L K + +
Sbjct: 109 VLG--NTKIGERTQVMVVTPTRELSTQVTEVISGLAGPLGIKVFSAL 153
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 87.4 bits (207), Expect = 2e-16
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 503
++ + L++ TRELA QI K ++ N K GG ++++D L+
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 504 HVVV 515
H+VV
Sbjct: 167 HIVV 170
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 87.4 bits (207), Expect = 2e-16
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGV 503
+ID + + QAL+L PTRELA Q+ + G +L+ GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 504 HVVV 515
VVV
Sbjct: 134 QVVV 137
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 87.4 bits (207), Expect = 2e-16
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Frame = +3
Query: 48 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 224
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 225 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 404
Q I I G DV+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI K
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISK 130
Query: 405 VVIALGDHL-NAKCHACIGGTNVREDIRQLESGV-HVVV 515
++ + K GG ++++D L+ HVVV
Sbjct: 131 EYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVV 169
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 87.0 bits (206), Expect = 2e-16
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 327 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 495 SGVHVVVA 518
GV V+VA
Sbjct: 122 HGVDVLVA 129
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 87.0 bits (206), Expect = 2e-16
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 324 QQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+++ + + LIL PTRELA QI ++ L + KC +GG +VRE L
Sbjct: 227 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 495 SGVHVVVA 518
S +VVA
Sbjct: 287 SMPDIVVA 294
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 87.0 bits (206), Expect = 2e-16
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 330 IDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ +++ +ALIL+P RELA Q KVV + + A +GG ++ E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 504 HVVVA 518
+VVA
Sbjct: 191 DIVVA 195
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 86.6 bits (205), Expect = 3e-16
Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 312 ISILQQID--TSI-RECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVRED 479
I +L ++ TS + +ALIL PTRELAQQ+ V D C +GG
Sbjct: 100 IPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQ 159
Query: 480 IRQLESGVHVVVA 518
I L+ GV V+VA
Sbjct: 160 ITALKKGVQVIVA 172
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 86.6 bits (205), Expect = 3e-16
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 323
+F+++ L E+ L + GF P+ IQ AI + G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
Q++ + AL+L PTRELA Q+ + +L + H GG ++ E +R LE G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 504 HVVV 515
++V
Sbjct: 167 EIIV 170
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 86.6 bits (205), Expect = 3e-16
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D NL ++R I GF S IQ A+ + GRD+I +AQ+GTGKTA F I++LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 330 I------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+ + E +ALILAPTRELA QI K L + + +GG + + QL
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQL 219
Query: 492 ESG-VHVVVA 518
E+ V VVVA
Sbjct: 220 ENEVVDVVVA 229
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 86.6 bits (205), Expect = 3e-16
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 330 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ +ALIL PTRELA Q+ + A H+N GG + ++L+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 495 SGVHVVVA 518
G ++VA
Sbjct: 123 QGADIIVA 130
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 86.6 bits (205), Expect = 3e-16
Identities = 43/122 (35%), Positives = 70/122 (57%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + + EE+ + +P+ +Q +AI P + RDV+AQAQ+GTGKT F + IL++
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
++ QALI+ PTRELA QI L + A GG +V + +R+L+ +H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 510 VV 515
++
Sbjct: 125 II 126
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 86.6 bits (205), Expect = 3e-16
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 317
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK--CHACIGGTNVREDIRQL 491
+L ID + QALIL+PTREL QQI+K + +++ + A GG + + L
Sbjct: 61 VLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNL 120
Query: 492 ESGVHVVVA 518
+ H+V+A
Sbjct: 121 KRTTHIVIA 129
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 86.6 bits (205), Expect = 3e-16
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 108 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 287
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 288 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 464
TGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G + N + + IGG
Sbjct: 70 TGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGL 129
Query: 465 NVREDIRQLESGVHVV 512
++ +D + L+S VV
Sbjct: 130 DISQDRKNLQSCSAVV 145
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 86.6 bits (205), Expect = 3e-16
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Frame = +3
Query: 15 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWD-QVVETFDDMNLKEELLRGI 191
SS D D N + +YD + G DTD + +F ++ L + ++ G+
Sbjct: 54 SSTLAVPDGAADGANSSGLQESNYDVEVQL--GDPDTDSPLSSISSFSELGLPQGIIDGL 111
Query: 192 YAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSISILQQID-TSIRECQAL 362
A F+KPS IQ RA+ + R++IAQ+QSGTGKT F ++IL ++D + QAL
Sbjct: 112 LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQAL 171
Query: 363 ILAPTRELAQQIQKVVIALG 422
LAP+RELA+QIQ V+ ++G
Sbjct: 172 ALAPSRELARQIQSVIQSIG 191
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 86.2 bits (204), Expect = 4e-16
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 506
++ + QALIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 507 VVVA 518
+V+A
Sbjct: 131 IVIA 134
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 86.2 bits (204), Expect = 4e-16
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 321 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
L++ID + QALI+APTRELA QI ++ L + A GG +V + +R+L+
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKG 123
Query: 498 GVHVVVA 518
H+VVA
Sbjct: 124 NTHIVVA 130
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 86.2 bits (204), Expect = 4e-16
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 330 -IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
ID +AL++ PTRELA QI + + L H A GG ++R GV
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 507 VVV 515
V++
Sbjct: 123 VLI 125
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 86.2 bits (204), Expect = 4e-16
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 327 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 495 SGVHVVVA 518
GV V+VA
Sbjct: 122 HGVDVLVA 129
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 86.2 bits (204), Expect = 4e-16
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
I+ +I Q LILAPTRELA Q+ + V + GG + +R L+ GVH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 507 VVV 515
+V
Sbjct: 134 AIV 136
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 86.2 bits (204), Expect = 4e-16
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 330 IDTSIR-----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + R + + L+L PTRELA Q+ + + + L K GG + I+ L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 495 SGVHVVVA 518
SG+ +VVA
Sbjct: 123 SGIDIVVA 130
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 86.2 bits (204), Expect = 4e-16
Identities = 61/159 (38%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Frame = +3
Query: 69 KDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 248
+D S D G + G T +F D+ L E L R + A GF+ PS +Q +
Sbjct: 16 RDDTSTDARAGANVGERATS----SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLG 71
Query: 249 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL--- 419
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q + + +
Sbjct: 72 RFGCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEMIEK 131
Query: 420 -----GDHLNAKCHAC--IGGTNVREDIRQLESGVHVVV 515
GD C +GG V+ED +L S HVVV
Sbjct: 132 FKDMDGD-ARGGIETCLLVGGLPVKEDRARLASQPHVVV 169
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 86.2 bits (204), Expect = 4e-16
Identities = 47/126 (37%), Positives = 73/126 (57%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
+Q+I+ +AL+L PTRELA+Q+Q + H + GG + IRQLE
Sbjct: 61 IQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLER- 118
Query: 501 VHVVVA 518
VVVA
Sbjct: 119 ADVVVA 124
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 85.8 bits (203), Expect = 5e-16
Identities = 46/124 (37%), Positives = 69/124 (55%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+ E + LIL P+RE+AQQI KV + L + IGGT + QL+
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 507 VVVA 518
+++A
Sbjct: 153 LIIA 156
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 85.8 bits (203), Expect = 5e-16
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
+I+ + R QA+I+APTRELA QI + G + N IGG ++R+ I++L+
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQ 121
Query: 504 HVV 512
VV
Sbjct: 122 IVV 124
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 85.8 bits (203), Expect = 5e-16
Identities = 46/128 (35%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 327 QIDTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
++ + R +AL+LAPTRELA Q+ + G L + + GG V I++L+
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 495 SGVHVVVA 518
G ++VA
Sbjct: 125 RGTDILVA 132
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 85.8 bits (203), Expect = 5e-16
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + LK+ELL G+ GF++ + +Q+ AI + RDV+A+A++GTGKT +F I ILQ
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQM 82
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL---NAKCHACIGGTNVREDIRQLESG 500
++ + QAL+L TRELA Q KV L ++ + IGG ++ ED +
Sbjct: 83 VNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVSIAEDRERAREK 142
Query: 501 VHVVVA 518
VV+A
Sbjct: 143 PLVVLA 148
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 85.8 bits (203), Expect = 5e-16
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI--GGTNVREDIRQLE 494
L I+T + + L++ TRELAQQ + + LG + + C GG V +I+ +E
Sbjct: 132 LNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIE 191
Query: 495 S 497
+
Sbjct: 192 T 192
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 85.4 bits (202), Expect = 7e-16
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 330 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ T + +ALIL+PTRELA Q Q+ + +G K +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 504 HVVVA 518
++VA
Sbjct: 160 DIIVA 164
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 85.4 bits (202), Expect = 7e-16
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 503
+ID S+++ Q L++ PTRELA Q+ + + + A + GG ++ L+ G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 504 HVVV 515
+VV
Sbjct: 129 AIVV 132
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 85.4 bits (202), Expect = 7e-16
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 503
+ID ++ E Q L+LAPTRELA Q+ + N GG + IR L+ G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 504 HVVV 515
V+V
Sbjct: 145 QVIV 148
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 85.4 bits (202), Expect = 7e-16
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 330 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ + R C+ LILAPTREL QI + + A + + K +GG + I++ E
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 495 SGVHVVVA 518
G ++VA
Sbjct: 193 RGADLIVA 200
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 85.4 bits (202), Expect = 7e-16
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V+TF+++ L LL G+ F P+ IQ AI + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNVREDIRQL 491
+Q + +I + A+I+ PTRELA Q+Q L + KC A IGGT+V +D +++
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRM 141
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 85.4 bits (202), Expect = 7e-16
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 326
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALG 422
++DT I Q + L PTRELA+Q Q VV LG
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 85.4 bits (202), Expect = 7e-16
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 12/141 (8%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 312 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 455
I ILQ + + + + A +L+PTRELA QI + ALG ++ +C +
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLV 124
Query: 456 GGTNVREDIRQLESGVHVVVA 518
GG + + L HV+VA
Sbjct: 125 GGIDRMQQTIALGKRPHVIVA 145
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 85.0 bits (201), Expect = 9e-16
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
D + ++ +F D L E + R + + P+ IQ + I + GRDV+ AQ+GTGKT
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKT 67
Query: 300 ATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 464
A+F++ IL +I + + L+L+PTREL+ QI A G H+ IGG
Sbjct: 68 ASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGV 127
Query: 465 NVREDIRQLESGVHVVVA 518
+ +R L GV V+VA
Sbjct: 128 PMGRQVRSLMQGVEVLVA 145
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 85.0 bits (201), Expect = 9e-16
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L L++ + G+ KP+ IQ +AI ++G+D+ AQ+GTGKTA F++ +
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 327 QIDTS-----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+ T+ R C+ LIL+PTRELA QI + HL +A GG + +R L
Sbjct: 67 YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRML 126
Query: 492 ESGVHVVVA 518
+ G ++VA
Sbjct: 127 DRGTDILVA 135
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 85.0 bits (201), Expect = 9e-16
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES-GV 503
+D ++ QAL+L PTRELA Q+ K + L + N K GG + + LE+
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 504 HVVV 515
HVVV
Sbjct: 148 HVVV 151
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/107 (36%), Positives = 69/107 (64%)
Frame = +3
Query: 195 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 374
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 375 TRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
+REL QI +V+ + + IGG NV++ + +L+ H++V
Sbjct: 81 SRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIV 127
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 85.0 bits (201), Expect = 9e-16
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ TF+ + + L+ G+ P+ +Q I IQ +D++ +Q+GTGKT + + I
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPI 60
Query: 321 LQQIDTSIRECQALILAPTRELAQQI--QKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
++IDTS RE QALILAPT EL QI Q ++A L+ A IG N+++ I+ ++
Sbjct: 61 FEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNIK 120
Query: 495 S-GVHVVV 515
+ H+V+
Sbjct: 121 AVKPHIVI 128
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 85.0 bits (201), Expect = 9e-16
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +3
Query: 120 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 300 ATFSISILQQIDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVRE 476
A F + +L +D R QAL+LAPTRELA Q Q + GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGP 156
Query: 477 DIRQLESGVHVVV 515
I L+ G VVV
Sbjct: 157 QIGALKRGAQVVV 169
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 85.0 bits (201), Expect = 9e-16
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Frame = +3
Query: 54 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVE-TFDDMNLKEELLRGIYAYGFEKPSAIQQ 230
++GP + S+ P + + +V E TF ++ L EEL+ + G P AIQ
Sbjct: 116 RSGPPRSPRSF-APSATEQALTAAEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQS 174
Query: 231 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRELAQQ 395
R + I GRD++ +A++G+GKT F + +L ++ R + L+L PTRELA Q
Sbjct: 175 RTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQ 234
Query: 396 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
+ + LGD L+ + +GG I L+ G+ V++A
Sbjct: 235 VADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIA 275
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 85.0 bits (201), Expect = 9e-16
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGD-HLNAKCHACIGGTNVREDIRQLESGVH 506
ID+ I+E QA+++APTRELAQQ+ L IGGT++ +D ++ +
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQ 125
Query: 507 VVV 515
+++
Sbjct: 126 LII 128
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 85.0 bits (201), Expect = 9e-16
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 321 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
L+++ + + +IL PTRELA Q V + L H + K +GG +++ +L
Sbjct: 352 LERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAEL 411
Query: 492 ESGVHVVVA 518
VV+A
Sbjct: 412 RLRPDVVIA 420
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 85.0 bits (201), Expect = 9e-16
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Frame = +3
Query: 99 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 272
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 273 QAQSGTGKTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKC 443
A +GTGKTA F++ +L+++ R+ + L+L PTREL Q+ V L N
Sbjct: 261 CAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITT 320
Query: 444 HACIGGTNVREDIRQLESGVHVVVA 518
+GG +V+ L + +++A
Sbjct: 321 CLAVGGLDVKSQEAALRAAPDILIA 345
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/124 (31%), Positives = 71/124 (57%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+ + L L+ + + +KP+ IQ + P + GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+I A++L PTRELA Q+ + + +G L +GG ++ + ++LE+ H
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 507 VVVA 518
++VA
Sbjct: 273 IIVA 276
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/125 (32%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ ++++L+ + P+ +Q+++I ++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 330 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ R ALIL PTRELAQQ+ + +H + + GGT++ +LE G
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 504 HVVVA 518
+++A
Sbjct: 129 DILIA 133
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 84.6 bits (200), Expect = 1e-15
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI--- 320
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 321 -LQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
L Q T +ALILAPTREL QI+K ALG + A GG + + L+
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 495 SGVHVVV 515
+G +V+
Sbjct: 123 AGADIVI 129
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 84.6 bits (200), Expect = 1e-15
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +3
Query: 114 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 293
T D + Q+ + F ++L+ +++RG+ A F P+ IQ AI + G D++ Q++SGTG
Sbjct: 16 TSDVEAGQM-KHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 294 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 470
KT + ++ LQ S + + L++ PTRELA Q+ + LG+ L + K + +GGT+V
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 471 REDIRQLESGVHVVV 515
D +L + HV +
Sbjct: 135 TRDREKLRN-CHVAI 148
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 84.2 bits (199), Expect = 2e-15
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+ + Q L+LAPTRELA Q+ + ++ + GG + + + L+ GVH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 507 VVV 515
V+V
Sbjct: 137 VIV 139
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 84.2 bits (199), Expect = 2e-15
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Frame = +3
Query: 42 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 221
P+ + N ++ DGP + TL V +F D+ ++E++ + + G P
Sbjct: 19 PDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFP 78
Query: 222 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILA 371
IQ +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++
Sbjct: 79 IQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMC 138
Query: 372 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
PTRELA Q+ K + A+ GG I L++GV VVV
Sbjct: 139 PTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKAGVDVVV 186
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 327 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
++ RE + L+L PTREL Q+ V L +GG +V+ L S
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRS 301
Query: 498 GVHVVVA 518
G V++A
Sbjct: 302 GPDVLIA 308
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 83.8 bits (198), Expect = 2e-15
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SIS 317
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
IL R ++LIL PTRELA Q+ + G + IGG + E LE
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 498 GVHVVVA 518
GV V++A
Sbjct: 122 GVDVLIA 128
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 83.8 bits (198), Expect = 2e-15
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLL 66
Query: 324 QQIDTSIRE-----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 488
++ + R + L+LAPTREL QI + H + GG + ++
Sbjct: 67 HRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKA 126
Query: 489 LESGVHVVVA 518
LE GV ++VA
Sbjct: 127 LEEGVDIIVA 136
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 330 ID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
++ + R QALIL PTRELA Q++ + L A GG +R + +L+
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 504 HVVV 515
H+VV
Sbjct: 126 HIVV 129
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 83.4 bits (197), Expect = 3e-15
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 330 I---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN---VREDIRQL 491
+ + + A+I+APTRELAQQI + V + A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 492 ESGVHVVVA 518
G +V+A
Sbjct: 123 AMGADIVIA 131
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 83.4 bits (197), Expect = 3e-15
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF++++L +LL I + KP+ IQ AI + +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 327 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+ R+ + LILAPTRELA QI KVV LG H + + GG + + L+S
Sbjct: 62 FLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQS 121
Query: 498 GVHVVVA 518
+ ++VA
Sbjct: 122 KIDILVA 128
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 83.4 bits (197), Expect = 3e-15
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 327 QI------DTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
++ D S R+ + L+L PTRELA Q+ LN GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 477 DIRQLESGVHVVVA 518
++ + GV V+VA
Sbjct: 122 QVQAMAKGVDVLVA 135
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = +3
Query: 201 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 380
GF P+ IQ+ AI ++G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 381 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
ELA QI + + N IGG N++ I L+ ++VA
Sbjct: 89 ELAMQIHQTIEKWTKDNNISSEPLIGGANIKRQIENLKKRPQIIVA 134
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 83.4 bits (197), Expect = 3e-15
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Frame = +3
Query: 45 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 218
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 219 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELA 389
IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 390 QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
Q+ +V L + + C GG +++ L SG VVVA
Sbjct: 233 IQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVA 275
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 83.4 bits (197), Expect = 3e-15
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 330 ID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ + +ALIL+PTRELA Q K + LG + K +GG ++ + +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 504 HVVVA 518
V+VA
Sbjct: 161 DVIVA 165
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 83.0 bits (196), Expect = 4e-15
Identities = 42/96 (43%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 314
V++F+++ LK ELL+G+Y GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCL 96
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 422
++L ++ + + Q L +APT ELA QI +V+ +G
Sbjct: 97 AMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMG 132
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 83.0 bits (196), Expect = 4e-15
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 327 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
++ D R + L++APTREL+ QI + + + ++ +GG ++ + L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 495 SGVHVVVA 518
GV +V+A
Sbjct: 122 EGVDIVIA 129
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 83.0 bits (196), Expect = 4e-15
Identities = 43/121 (35%), Positives = 66/121 (54%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ + L++ PTRELA Q+ + G K GGT + I +++ V
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQASIV 121
Query: 510 V 512
V
Sbjct: 122 V 122
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 83.0 bits (196), Expect = 4e-15
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ TF ++ L + + + ++ P+ IQ + I ++GRDV+ AQ+GTGKTA ++ I
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 321 LQQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 485
L Q+ + R+ AL+LAPTRELA QI A G HL + GG ++
Sbjct: 61 LNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVK 120
Query: 486 QLESGVHVVVA 518
L+ G H++VA
Sbjct: 121 ALKRGAHILVA 131
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 83.0 bits (196), Expect = 4e-15
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Frame = +3
Query: 21 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 197
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 198 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 377
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 378 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
RELA QI + ALG + KC +GG ++ R+L HVVVA
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVA 213
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 83.0 bits (196), Expect = 4e-15
Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ L + +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 330 I--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
I +R AL+LAPTRELAQQIQ+V G +NA GG IR LE
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 495 SGVHVVVA 518
G +V+A
Sbjct: 244 RGAEIVIA 251
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 83.0 bits (196), Expect = 4e-15
Identities = 43/129 (33%), Positives = 70/129 (54%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 312 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+ IL + + + AL+L PTRELA QI + ALG + + +GG + L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 128
Query: 492 ESGVHVVVA 518
H+++A
Sbjct: 129 AKKPHIIIA 137
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 83.0 bits (196), Expect = 4e-15
Identities = 41/122 (33%), Positives = 70/122 (57%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F++ NL+ EL+ I G+ +P+ +Q AI + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ +ALIL PTRELA Q+ KV ALG + GG ++ + I + G ++
Sbjct: 64 -TAKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 510 VV 515
+V
Sbjct: 123 IV 124
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 83.0 bits (196), Expect = 4e-15
Identities = 43/129 (33%), Positives = 70/129 (54%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 312 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+ IL + + + AL+L PTRELA QI + ALG + + +GG + L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 492 ESGVHVVVA 518
H+++A
Sbjct: 140 AKKPHIIIA 148
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 82.6 bits (195), Expect = 5e-15
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +3
Query: 159 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 338
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 339 SIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 497
I Q LILAPTRE+A QI +V ++G + + K IGG + D +++ +
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNN 114
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 82.6 bits (195), Expect = 5e-15
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
+DDMN+ ++LL I +E P+ IQ +I ++ RD+IA A++GTGKT + I ++Q
Sbjct: 179 WDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQF 237
Query: 330 I--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 485
+ +TS AL+LAPTRELA QIQK + L + CIGG ++ I
Sbjct: 238 VLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIE 297
Query: 486 QLESGVHVVVA 518
+L +G +VVA
Sbjct: 298 ELSNGAEIVVA 308
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 82.6 bits (195), Expect = 5e-15
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 326
F NL +L+ + F++PS IQ AI P IQ + D+IA +Q+G+GKTAT +I I
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGKTATCAIPICN 75
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+++T + + QALI+ PTRELA Q +G + K A GG + +L+ GV
Sbjct: 76 RVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSALQQSKLKHGVQ 135
Query: 507 VVVA 518
V+VA
Sbjct: 136 VLVA 139
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 82.6 bits (195), Expect = 5e-15
Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSISIL 323
+ + L +LL+GI GF KPS IQQ A+ P I G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 443
+++ ++ QAL + PTRELA Q +V+ LG KC
Sbjct: 160 SKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 82.6 bits (195), Expect = 5e-15
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 327 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
++ + + LIL PTRELA Q V + + CIGG +++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 498 GVHVVVA 518
+V+A
Sbjct: 380 RPDIVIA 386
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 82.2 bits (194), Expect = 7e-15
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 330 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
I + +ALILAPTRELA QI++ + + + +GG + I+++
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIA 208
Query: 495 SGVHVVVA 518
G+ V++A
Sbjct: 209 PGIDVLIA 216
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 82.2 bits (194), Expect = 7e-15
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSI 314
++TF + + ++++G+ GF + +Q++ I+P + R D++ AQ+GTGKTA F I
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGI 59
Query: 315 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 491
++Q DT ++ QAL+L PTREL Q+ + +G ++ K GG ++ +L
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEEL 119
Query: 492 ESGVHVVVA 518
G VVVA
Sbjct: 120 RKGAQVVVA 128
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 82.2 bits (194), Expect = 7e-15
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI---SI 320
F D+ L E + R I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+F++ I
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
L R ++LIL PTRELA Q+ + + G +L IGG ++ + L G
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKG 344
Query: 501 VHVVVA 518
V V++A
Sbjct: 345 VDVLIA 350
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 82.2 bits (194), Expect = 7e-15
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 330 IDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
+ S R+ +AL+L PTRELA Q+ + A+ HL K A GGT + L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL--KVVAVYGGTGYGKQKEALLRG 120
Query: 501 VHVVVA 518
VVA
Sbjct: 121 ADAVVA 126
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 82.2 bits (194), Expect = 7e-15
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FD + L +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+Q
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 330 IDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
+ + +AL++ PTRELA Q+ + L K A GG N+ + +E G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 501 VHVVVA 518
V ++VA
Sbjct: 144 VDILVA 149
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 82.2 bits (194), Expect = 7e-15
Identities = 39/125 (31%), Positives = 73/125 (58%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 500
++++ + Q+LILAPTRELA Q+ + + + GG + I+ L+ G
Sbjct: 61 IEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKG 119
Query: 501 VHVVV 515
+VV
Sbjct: 120 PQIVV 124
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 82.2 bits (194), Expect = 7e-15
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 321 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
L+++ + + ++L PTRELA Q V L H + K +GG +++ +L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 492 ESGVHVVVA 518
VV+A
Sbjct: 395 RLRPDVVIA 403
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 82.2 bits (194), Expect = 7e-15
Identities = 40/122 (32%), Positives = 76/122 (62%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
++ + L LL+ I G++ PS +Q +I + G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
I++S Q +IL P RELA QI + V + + +GGT++++DI ++ +GVHV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 510 VV 515
+V
Sbjct: 230 MV 231
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 81.8 bits (193), Expect = 9e-15
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGKTA +++ IL +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 330 ID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
I +A+I PTREL QI+ + L + + + A GG + L+ GV
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVD 126
Query: 507 VVVA 518
++VA
Sbjct: 127 IIVA 130
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 81.8 bits (193), Expect = 9e-15
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 321 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
L++I+ + QA++L PTRELA+Q+ Q+ A D N K GG + I+ L+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 498 GVHVVV 515
H++V
Sbjct: 123 SPHIIV 128
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 81.8 bits (193), Expect = 9e-15
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F++ + ++ I GF KP+AIQ + + GRD++ AQ+G+GKT + + +
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 330 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
I+ R + AL+LAPTRELAQQIQ+V I G + + + GG + R LE
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLE 278
Query: 495 SGVHVVVA 518
GV +V+A
Sbjct: 279 RGVEIVIA 286
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 81.8 bits (193), Expect = 9e-15
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ ++++ L ELL+ + G++KPS IQ AI +Q RDVI A++G+GKTA F + +
Sbjct: 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371
Query: 321 LQQI--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 476
L I + A+++APTRELAQQI++ + +L + + +GG ++ E
Sbjct: 372 LAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEE 431
Query: 477 DIRQLESGVHVVVA 518
++ G +V+A
Sbjct: 432 QGLKITQGCEIVIA 445
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 81.8 bits (193), Expect = 9e-15
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Frame = +3
Query: 201 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LI 365
GF KPS IQ +AI + GRD+I A++G+GKT ++ + +++ I + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 366 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
L+PTRELA QI+K ++ ++ K C GG+N+ I +L+ GV+V+VA
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVA 517
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 81.4 bits (192), Expect = 1e-14
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKTATF--- 308
+ +F + EEL+R I GFEKP+ IQ +A +PC + GRD++ A++G+GKT ++
Sbjct: 61 IVSFGHLGFDEELMRQITKLGFEKPTQIQCQA-LPCGLSGRDIVGVAKTGSGKTVSYLWP 119
Query: 309 -SISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 482
I IL Q + E LILAPTREL QQ+ N A +GG N E
Sbjct: 120 LLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQW 179
Query: 483 RQLESGVHVVVA 518
+ L++GV +++A
Sbjct: 180 KMLKAGVEILIA 191
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 81.4 bits (192), Expect = 1e-14
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 11/130 (8%)
Frame = +3
Query: 159 MNLKEEL---LRG-IYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
MNL E L LR I+ G+E + +Q A P ++GRD++ A++G+GKT F ++I
Sbjct: 1 MNLPETLPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIAN 60
Query: 327 QI----DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 485
++ DT + LI+APTRELA Q+ + + L + NA+ C+GG ++R++ R
Sbjct: 61 ELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERR 120
Query: 486 QLESGVHVVV 515
LE G H+VV
Sbjct: 121 ALERGAHIVV 130
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 330 IDTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 497
+ IR+ +ALIL+PTRELA Q K + LG K +GG N+ +
Sbjct: 98 L--KIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHG 155
Query: 498 GVHVVVA 518
+++A
Sbjct: 156 NPDILIA 162
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL-- 323
F +L E ++ + G+++P+ IQ+ I I G D++ AQ+GTGKTA FS+ I+
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 324 ---QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ID + ++LIL PTRELA QI + + D L K GG + + +E
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 495 SGVHVVVA 518
G+ ++VA
Sbjct: 124 LGLDILVA 131
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 330 I-DTSIRECQALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNVREDIRQLESGV 503
+ D + L++ PTRELA Q+ + + + N K A GGT+ R I L+ V
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 504 HVVV 515
VVV
Sbjct: 173 DVVV 176
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 81.0 bits (191), Expect = 2e-14
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Frame = +3
Query: 180 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIR 347
LR I G+ P+AIQ +AI + GRDV+ AQ+G+GKTA F++ +LQQ+ + R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 348 ECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQLESGVHVVVA 518
+ LIL PTRELA Q+ + + +L K GG ++ + L G +VVA
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVA 135
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 81.0 bits (191), Expect = 2e-14
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ L + LL+ + G+ P+ IQ +AI + GRD++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 330 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
+ R + L+L+PTRELA QI + G H+ GG ++ L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 495 SGVHVVVA 518
+GV VVVA
Sbjct: 187 AGVDVVVA 194
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/123 (33%), Positives = 64/123 (52%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L + L + G+ +P+ IQ +A+ + GRDV AQ+GTGKTA F++ IL +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ R + L+L PTRELA Q+++ + + GG + L+ GV V
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDV 254
Query: 510 VVA 518
V A
Sbjct: 255 VAA 257
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 326
F D+ + L + + P+ IQ++ I + + D++A A++GTGKTA F + +LQ
Sbjct: 5 FSDLGINLALQQRLNDLKIITPTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQ 64
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 503
ID + QA+ILAPTREL QQI +I+ +H + A + GG ++ I +L+
Sbjct: 65 LIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPIKPQIERLKEAT 124
Query: 504 HVVVA 518
H++VA
Sbjct: 125 HIIVA 129
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Frame = +3
Query: 159 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID- 335
M L E + + + P+ IQ +AI ++G D+I AQ+GTGKTA F++ IL Q+D
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 336 --TSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ C Q L+L+PTRELA QI + G ++ + GG +R L+ GV
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Query: 504 HVVVA 518
HV +A
Sbjct: 121 HVAIA 125
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/122 (33%), Positives = 67/122 (54%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+ Q LIL P RELA Q+ + + +L K A G N+ + + L GV
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 507 VV 512
+V
Sbjct: 124 IV 125
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F D+NL L + F+ P+ IQ++A + GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 327 QIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ S + + LI+ PTREL Q+ + + L ++N + GG N+ + L G+
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 504 HVVVA 518
+VVA
Sbjct: 130 DIVVA 134
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/124 (34%), Positives = 71/124 (57%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TF+D+N+ EE+L I G++KP+ IQ+ + +D+I +++G+GKTA F I ILQ
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQ 216
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+ + + AL+++PTREL QI + ALG +L GG ++ L +
Sbjct: 217 DLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNLAKKPN 276
Query: 507 VVVA 518
V+V+
Sbjct: 277 VIVS 280
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 81.0 bits (191), Expect = 2e-14
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI---S 317
+F+ L ELLR +Y+ GF PS IQ ++ +Q RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 318 ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
LQ+I R L+L+PTRELA QIQ + G C GG ++++E
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 495 SGVHVVVA 518
GV +VVA
Sbjct: 282 RGVDIVVA 289
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ +NL + I G++ P+ IQ++ + + G DV+A A++G+GKTA F I +L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 330 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ + + +ALIL+PTR+LA+Q K LG + + +GG ++ + +L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 504 HVVVA 518
V++A
Sbjct: 150 DVIIA 154
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +3
Query: 135 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 314
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 315 SILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CIGGTNVREDI 482
I++++ I + ++L PTRELA Q+ V + ++ +GG N+R+
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 483 RQLESGVHVVVA 518
+ L+S +V+A
Sbjct: 348 QMLKSRPDIVIA 359
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 81.0 bits (191), Expect = 2e-14
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ ++ D +L +L I G+++P+ IQ++AI +Q RD+I A++G+GKTA F I +
Sbjct: 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449
Query: 321 L---------QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 473
L +I+ S + A+ILAPTRELAQQI++ I G L + A IGG +
Sbjct: 450 LVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISRE 509
Query: 474 EDIRQLESGVHVVVA 518
+ +L G +V+A
Sbjct: 510 DQGFRLRMGCEIVIA 524
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/124 (35%), Positives = 70/124 (56%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
TFD +N++ L++ + ++P+ IQ+ I ++GRD I +++G+GKT F++ ILQ
Sbjct: 196 TFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 255
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
Q + +IL PTRELA QI + VIAL K GG ++R+ L H
Sbjct: 256 QWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLAKRPH 315
Query: 507 VVVA 518
+V+A
Sbjct: 316 LVIA 319
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 80.6 bits (190), Expect = 2e-14
Identities = 38/124 (30%), Positives = 71/124 (57%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 323
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 324 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ ++ + QAL+L PTRELA Q+++ + +G K A G + +L+
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 504 HVVV 515
H+VV
Sbjct: 124 HIVV 127
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/122 (36%), Positives = 68/122 (55%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
FD L + L G+ G+E + +Q+ + QG DVI QA++G+GKTA F + IL++
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
S + QAL+LAPTRELA Q+ + L + GGT++ + + L GV +
Sbjct: 67 CQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 510 VV 515
+V
Sbjct: 126 IV 127
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 80.6 bits (190), Expect = 2e-14
Identities = 43/123 (34%), Positives = 64/123 (52%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + E + + G KP+A+QQ + I G + I +Q+GTGKTA F++ I+
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
+ AL+++PTRELAQQI + G +NA IGG + + LE H+
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
Query: 510 VVA 518
VVA
Sbjct: 125 VVA 127
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 80.2 bits (189), Expect = 3e-14
Identities = 44/124 (35%), Positives = 68/124 (54%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++ +AL+LAPTRELA QI + + G + IGG + + L
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 507 VVVA 518
+V+A
Sbjct: 124 IVIA 127
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D+ LK +LL G+ G+E PS IQ++ I I +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 431
I + +++IL PTRELA QI ++ L ++
Sbjct: 77 IYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 497
++ + R Q ++L P+RELA Q+ + L H GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 498 GVHVVV 515
GV +++
Sbjct: 123 GVQIII 128
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+ M L EE+ RG+ G+ P+ IQ++A+ + G D+ A A++G+GKTA F + ++Q+
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 330 I--DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 503
+ + +ALIL+PTR+LA Q K LG + K +GG ++ +L
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP 170
Query: 504 HVVVA 518
+++A
Sbjct: 171 DIIIA 175
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 80.2 bits (189), Expect = 3e-14
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +3
Query: 42 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 221
PE ++ + + P P T +VV +F ++ L+ LLRGI + P+A
Sbjct: 15 PESPQSPKRRASDASQSEPASPPAP--TPAKEVVASFAELQLEPRLLRGIRDQKWGSPTA 72
Query: 222 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-ALILAPTRELAQQI 398
+Q +AI +QGRD++A++ +GTGKT + + IL +T +R+ + +LIL PT+ELA QI
Sbjct: 73 VQSKAIPLALQGRDILARSGTGTGKTGAYLLPILH--NTLLRKGKTSLILVPTKELALQI 130
Query: 399 QKVVIALGDH 428
KV AL H
Sbjct: 131 TKVAKALSAH 140
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 79.8 bits (188), Expect = 3e-14
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = +3
Query: 54 KNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 230
KNG + G + P G +D + + + F + ++ + + ++A G + IQ
Sbjct: 71 KNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLFPIQA 130
Query: 231 RAIMPCIQGRDVIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILAPTRELAQQI 398
+ P G DVIAQA++GTGKT +F + ++ QQ S R+ L LAPTRELA+QI
Sbjct: 131 QTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQI 190
Query: 399 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
+ A+G HL+ C GGT+ + G+ VVV
Sbjct: 191 SEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVV 227
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 79.8 bits (188), Expect = 3e-14
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + + E +L+ I G++ P+ IQ AI + G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 330 IDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
++ R+ ++LI+ PTRELA QI + A G H GG N L+
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 495 SGVHVVVA 518
G+ +++A
Sbjct: 204 KGIDILIA 211
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 79.8 bits (188), Expect = 3e-14
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Frame = +3
Query: 153 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 332
+++ + + + + A G+ + + IQ AI ++G D++ AQ+GTGKTA F+I ILQ +
Sbjct: 4 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 63
Query: 333 D------TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 494
R+ +AL+LAPTRELA QI + A G +L + GG R+LE
Sbjct: 64 AMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLE 123
Query: 495 SGVHVVVA 518
G+ ++VA
Sbjct: 124 KGIDILVA 131
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 79.8 bits (188), Expect = 3e-14
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
V + D+ L E+++ I G+ + + +Q AI ++ +DVIA+A +GTGKT F I +
Sbjct: 11 VVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPM 70
Query: 321 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLES 497
++ ID QAL+LAPTRELA QIQ + L + C+ GG + + I L+
Sbjct: 71 VEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKK 130
Query: 498 GVHVVVA 518
+VVA
Sbjct: 131 HPQIVVA 137
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 79.8 bits (188), Expect = 3e-14
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F ++ L + L + + G++ P+ IQ+ +I + G D A A +GTGKTA + + LQ+
Sbjct: 4 FAELGLNKTLQANVLSLGYKSPTYIQEHSIGAVLSGTDTYAIAPTGTGKTAAYLLPTLQE 63
Query: 330 ---IDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
+D S +R +AL L PTRELA Q+++ + G LN + + GG + + +
Sbjct: 64 LSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKYGKGLNLRTISVFGGVRIPSQVNRF 123
Query: 492 ESGVHVVVA 518
+ G +VVA
Sbjct: 124 KRGADIVVA 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,866,836
Number of Sequences: 1657284
Number of extensions: 12863463
Number of successful extensions: 41697
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 39243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40907
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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