Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309B04f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 6e-53
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 3e-43
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 117 7e-27
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 117 7e-27
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 98 3e-21
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 91 4e-19
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 89 3e-18
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 6e-17
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 81 5e-16
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 81 7e-16
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 76 2e-14
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 69 2e-12
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 69 3e-12
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 62 2e-10
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 59 2e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 59 2e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 59 2e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 51 7e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 47 8e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 1e-05
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 36 0.027
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.44
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 30 1.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 3.1
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 3.1
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 4.1
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 5.4
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 203 bits (496), Expect = 6e-53
Identities = 108/163 (66%), Positives = 123/163 (75%), Gaps = 28/163 (17%)
Frame = +3
Query: 111 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 254
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 255 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTREL 386
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTREL
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTREL 171
Query: 387 AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
AQQIQKVV+ALGD+++ KCHACIGGTNVRED +LE GVHVVV
Sbjct: 172 AQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVV 214
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 171 bits (416), Expect = 3e-43
Identities = 79/104 (75%), Positives = 94/104 (90%)
Frame = +3
Query: 201 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 380
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 381 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 512
ELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V
Sbjct: 76 ELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIV 119
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 117 bits (281), Expect = 7e-27
Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL---ESG 500
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 501 VHVVV 515
VHVVV
Sbjct: 169 VHVVV 173
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 117 bits (281), Expect = 7e-27
Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL---ESG 500
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 501 VHVVV 515
VHVVV
Sbjct: 169 VHVVV 173
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 98.3 bits (234), Expect = 3e-21
Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 506
+ T Q +IL PTRE+A Q++ V+ A+G H + C IGG ++ ED + L+S H
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKS-CH 133
Query: 507 VVV 515
+ V
Sbjct: 134 IAV 136
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 91.5 bits (217), Expect = 4e-19
Identities = 39/57 (68%), Positives = 51/57 (89%)
Frame = +3
Query: 342 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 512
+RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIV 57
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 88.6 bits (210), Expect = 3e-18
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 503
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 504 HVVV 515
H+VV
Sbjct: 169 HIVV 172
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 88.6 bits (210), Expect = 3e-18
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 330 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 503
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 504 HVVV 515
H+VV
Sbjct: 169 HIVV 172
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 84.2 bits (199), Expect = 6e-17
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 321 L-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 485
L Q ++ R AL +APTRELA+QI DH K C GG +V
Sbjct: 538 LTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQAS 597
Query: 486 QLESGVHVVV 515
QLE G H +V
Sbjct: 598 QLERGCHFLV 607
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 81.0 bits (191), Expect = 5e-16
Identities = 45/124 (36%), Positives = 69/124 (55%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 326
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
++ A++L PTRELA QI LG + K +GG ++ + L + H
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 507 VVVA 518
VV+A
Sbjct: 128 VVIA 131
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 80.6 bits (190), Expect = 7e-16
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Frame = +3
Query: 144 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKTATFSIS 317
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 318 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 428
+L ++D + Q + L+PT ELA+Q KV A+G H
Sbjct: 163 MLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 78.6 bits (185), Expect = 3e-15
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 321 LQQI------DTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 473
+ + +S E QA+ +APTRELA QI + C GG +V
Sbjct: 770 MTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVS 829
Query: 474 EDIRQLESGVHVVV 515
+RQL+SG +++V
Sbjct: 830 HQLRQLQSGCNLLV 843
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 321 LQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 488
++ Q TS+ AL+++PTRELA Q +V++ +G+ + IGG +++ + ++
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKR 168
Query: 489 L 491
+
Sbjct: 169 I 169
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/123 (31%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Frame = +3
Query: 162 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQI 332
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GKT F + +L ++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 333 DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 509
R +I++PTREL+ Q V L H N +GG N + + +L+ GV++
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNL 697
Query: 510 VVA 518
++A
Sbjct: 698 LIA 700
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +3
Query: 147 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SI 314
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 315 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 491
I+ Q + + + LI APTREL QQI G N A GG N E + L
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKAL 637
Query: 492 ESGVHVVVA 518
+ G +VVA
Sbjct: 638 QEGAEIVVA 646
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 68.9 bits (161), Expect = 2e-12
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 320
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 321 L---------QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 467
L ++ + + + ALILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 160 LVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +3
Query: 258 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 437
+DVI A++G+GKT F++ ILQ + + + ALIL PTRELA QI + ALG +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 438 KCHACIGGTNVREDIRQLESGVHVVVA 518
KC +GG ++ L H+++A
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPHIIIA 88
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 64.9 bits (151), Expect = 4e-11
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 20/143 (13%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISILQ 326
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 327 QIDT--------------SIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 449
I+ S E Q ALI+APTRELA Q++ ++ + + K A
Sbjct: 192 HIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAA 251
Query: 450 CIGGTNVREDIRQLESGVHVVVA 518
+GG + R L+ +VVA
Sbjct: 252 IVGGMAAPKQQRLLKQRPEIVVA 274
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +3
Query: 126 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 305
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++G+GKT
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 306 FSISILQQIDTSIRECQ-----ALILAPTRELAQQI 398
+S+ + + T ALIL PTREL QQ+
Sbjct: 126 YSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 249 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALG 422
+ G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q QK + LG
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG 375
Query: 423 DHLNAKCHACIGGTNV 470
K +GG +V
Sbjct: 376 RFTGLKSSVILGGDSV 391
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 311
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 312 ISILQQI---DTSIRECQALILAPTRELAQQ 395
+ IL+++ T + L++ PTRELA Q
Sbjct: 66 LPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Frame = +3
Query: 30 SEDWPEDSKNG--PSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYG 203
+E+ PE SK +KD+ +D G++P + D F + ++ + + G
Sbjct: 40 AEEQPEVSKKKRKTAKDESEFD--EGVEPSVAQREGD-----FSKFRISQKTIDNLEDRG 92
Query: 204 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALI 365
IQ G DVI QA++GTGKT +F++ +++++ D + R + L+
Sbjct: 93 ITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLV 152
Query: 366 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
+APTRELA+Q+ L +L C GG + SG+ V+V
Sbjct: 153 MAPTRELAKQVGNEFENLKSNLEVYC--IYGGMPYEPQENAINSGLDVLV 200
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Frame = +3
Query: 99 GMDPG-TLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 269
G +P T D+D + Q V +F + L++++L+ + A +P+ IQ I I VI
Sbjct: 360 GQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVI 419
Query: 270 AQAQSGTGKTATFSISILQQ---------IDTSIRECQALILAPTRELAQQIQKVVIALG 422
AQ+G+GKT + ++ + I ++ +A I+ P RELA QI K +L
Sbjct: 420 CAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLC 479
Query: 423 DHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
H + IGG + LES V ++VA
Sbjct: 480 HHARFRSVGLIGGRKQKWMRDDLESPVDLLVA 511
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 326
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GKTA F I IL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 327 QI 332
+I
Sbjct: 936 RI 937
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3
Query: 429 LNAKCHACIGGTNVREDIRQLESGVHVVV 515
++ KCHACIGGTNVRED +LE GVHVVV
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVV 29
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 360 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVA 518
L+L PTRELAQQ+Q+V ++G H + GG IR+LE GV + +A
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIA 188
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 47.2 bits (107), Expect = 8e-06
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 329
F + + +L+ + G KP IQ++A+ + ++ ++++GTGK+ F +L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPS 218
Query: 330 IDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 506
+ R +I+ PTRELA Q + +V LGD + + + G ++ + L+ +H
Sbjct: 219 VQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLKDSLH 276
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 299
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 345 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 515
R+ A+++ PTRELA QI + N +C GGT + E I +L+ G ++V
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIV 199
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 141 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 302
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + T + A
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 296
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 21 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 191
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 192 YAYGFEKPSA 221
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 201 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 341
G P+++Q+ ++GRDV A G+GK + + I+ QI S
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 150 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 284
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 63 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 236
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1228 PSDEVGTLESTQMCDKIYLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSSSA 1285
Query: 237 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 356
P + G D +I Q+ GKT SI QQ+DT RE Q
Sbjct: 1286 --PSLMGTDEIICQSLEHAGKTPPALSSISQQLDTR-REIQ 1323
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 207 EKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 356
+KP + A P + G D +I Q++ GKT SI QQ+DT RE Q
Sbjct: 1567 DKPPKVSFSA--PSLMGTDEIICQSREHAGKTPPALSSIPQQLDTG-REIQ 1614
Score = 27.9 bits (59), Expect = 5.4
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +3
Query: 63 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 236
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1810 PSDEVGTLESTQKFDEIDLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSFSA 1867
Query: 237 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDT--SIRE 350
P + G D +I Q+ GKT S QQ+DT IRE
Sbjct: 1868 --PSLMGTDEIICQSLEHAGKTPPALSSFSQQLDTRREIRE 1906
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 60 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 188
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 327 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 455
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 249 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 350
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 3 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGP 95
+M Y SER P D P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +3
Query: 174 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 353
E+ + + GF A Q++A+M + G + +G GK+ + + S C
Sbjct: 512 EVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRS--PC 569
Query: 354 QALILAPTRELAQ 392
L+++P L +
Sbjct: 570 LTLVISPLVSLME 582
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 443 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 330
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 45 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 176
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 45 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 176
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 197 GVYASQQFFFEVHVIEGFDNLIPVGVKC 114
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -3
Query: 417 ELSPPSEFVGPALLWEPGSK-LDIHECL 337
EL GP LW PGS+ D ECL
Sbjct: 989 ELQDSRWLTGPEFLWRPGSEWQDAKECL 1016
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Frame = +3
Query: 57 NGPSKDQGSYDGPPGMDPGTLD-------TDWDQVVE 146
NGP+ D YD PP P T D T+WD ++
Sbjct: 340 NGPTSDNTDYDSPPRATP-TYDAPTRSTRTNWDPTID 375
>SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 204 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 356
F + AI+ + C+ R + G G + +I+IL + S RE Q
Sbjct: 147 FLEQQAIRDKLTFSCVDDRSKLKLYDEGAGLSLDKTITILSMKEASSRELQ 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,273,739
Number of Sequences: 59808
Number of extensions: 410338
Number of successful extensions: 1984
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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