Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309A12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 36 0.086
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 36 0.086
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 36 0.086
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 36 0.086
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 36 0.086
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 36 0.086
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 36 0.086
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 36 0.086
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 36 0.086
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 0.61
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 0.61
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 0.61
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 0.61
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 0.61
AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein pr... 30 4.3
AF273437-1|AAF75796.1| 1125|Homo sapiens actin binding protein a... 29 7.5
BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marke... 29 9.9
BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marke... 29 9.9
BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosia... 29 9.9
AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein prot... 29 9.9
AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marke... 29 9.9
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 94 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 135
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 186 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 227
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 35.9 bits (79), Expect = 0.086
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 231
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 106 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 240
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 108 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 152
>AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein
protein.
Length = 231
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 90 PCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHL--SPYITQCNPLSSR 227
P P L T L PP RP LS PPL L SP ++ C+P SR
Sbjct: 120 PAAPPPALPGPTPLPPPSPRPSPPLSPRPPLLLGCSPTLSLCSPPYSR 167
>AF273437-1|AAF75796.1| 1125|Homo sapiens actin binding protein
anillin protein.
Length = 1125
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 224 ATLVHASVTPVLQEDTSPVSPVTDKEDDSRKDGPSPEL 337
A+LV+AS++ ++ +SPV T D +G +PEL
Sbjct: 280 ASLVNASISSSVKATSSPVKSTTSITDAKSCEGQNPEL 317
>BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 613 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 655
>BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 613 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 655
>BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosialin
protein.
Length = 757
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 613 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 655
>AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ14384 fis, clone HEMBA1002150. ).
Length = 433
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 289 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 331
>AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein
protein.
Length = 757
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 613 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 655
>AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marker 1
precursor protein.
Length = 757
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 QPALVATLVHASVTPVLQEDTSPVSPV---TDKEDDSRKDGPSPEL 337
QPA + TL+ S +P Q TSP+SP + R+DGPSP+L
Sbjct: 613 QPAALPTLL-PSQSPTNQ--TSPISPTHPHSKAPQIPREDGPSPKL 655
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,198,140
Number of Sequences: 237096
Number of extensions: 1054400
Number of successful extensions: 4276
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4274
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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