Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309A12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030129-1|ABN49268.1| 440|Drosophila melanogaster IP15743p pro... 31 0.95
AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-P... 31 0.95
AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-P... 31 0.95
AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p pro... 30 1.7
AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p pro... 30 1.7
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 30 1.7
AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-P... 30 1.7
AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,... 30 1.7
AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,... 30 1.7
AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,... 30 1.7
AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,... 30 1.7
X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein pr... 29 2.9
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro... 29 2.9
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein... 29 2.9
AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby p... 29 2.9
BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p pro... 29 5.1
AE014297-874|AAF54335.1| 1368|Drosophila melanogaster CG11033-PA... 29 5.1
AY131211-1|AAM97280.1| 608|Drosophila melanogaster scaffold pro... 28 6.7
AY069854-1|AAL39999.1| 607|Drosophila melanogaster SD10307p pro... 28 6.7
AE014297-3264|AAF56090.3| 608|Drosophila melanogaster CG33193-P... 28 6.7
AY565957-1|AAS74967.1| 288|Drosophila melanogaster 5-HT2 protein. 28 8.8
AY118418-1|AAM48447.1| 116|Drosophila melanogaster RE70695p pro... 28 8.8
AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-P... 28 8.8
AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-P... 28 8.8
>BT030129-1|ABN49268.1| 440|Drosophila melanogaster IP15743p
protein.
Length = 440
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 88 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 252
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-PA,
isoform A protein.
Length = 1901
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 88 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 252
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-PB,
isoform B protein.
Length = 1913
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 88 TRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYA 252
T T +++ +T+P AA +TSAR S N+ RS R + RLC A
Sbjct: 33 TATQPGTTTTTVATASAGTTSPEAAIPTAATATSARNS-NSERSARQNCCRLCIA 86
>AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p
protein.
Length = 975
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 446 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 486
>AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p protein.
Length = 1351
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1000 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1040
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 79 CTGTRAHAARTYAPARSS----ARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLC 246
C G R ++ AR S +R + AAA RR R S+N T SRR + R C
Sbjct: 1611 CEGIRTFPCANFSTARKSWVCSSRCRSDAAAASVLRRAGHECRLSYN-TMSRRAASGRSC 1669
Query: 247 YARS 258
+R+
Sbjct: 1670 KSRT 1673
>AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-PA
protein.
Length = 1059
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 82 TGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRR 225
+ T A A PA++SA + A AAA A STS S +AT ++
Sbjct: 231 SATGADALPPALPAKASATAAAAAAAAAAASNASTSTSASVSATEQQQ 278
>AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,
isoform A protein.
Length = 975
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 446 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 486
>AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,
isoform D protein.
Length = 1028
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 499 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,
isoform C protein.
Length = 1222
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 871 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 911
>AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,
isoform B protein.
Length = 1351
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 109 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
T A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1000 TAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1040
>X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein
protein.
Length = 850
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 103 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 497 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
protein.
Length = 1028
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 103 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 497 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 539
>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 103 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 869 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 911
>AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby
protein.
Length = 1354
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 103 ARTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSG 234
A A A ++A + A AAA H +RP +S+ +S T S SG
Sbjct: 1001 AAAAAAAAAAAAAAAAAAAAAHLQRPMSSS-SSSGGTNSSNSSG 1043
>BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p protein.
Length = 1345
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 36 RLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPI 143
+L+ + R+ +++ L CP + L T LCPP+
Sbjct: 1139 QLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPL 1174
>AE014297-874|AAF54335.1| 1368|Drosophila melanogaster CG11033-PA
protein.
Length = 1368
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 36 RLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPI 143
+L+ + R+ +++ L CP + L T LCPP+
Sbjct: 1162 QLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPL 1197
>AY131211-1|AAM97280.1| 608|Drosophila melanogaster scaffold
protein salvador protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 72 QGLHRHPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNP 215
Q +HPC Y+ T + P RP L PP H + NP
Sbjct: 483 QSQRQHPCLTSYYVYTTSAEPPKAIRPEASL-YAPPTHTHNALVPANP 529
>AY069854-1|AAL39999.1| 607|Drosophila melanogaster SD10307p
protein.
Length = 607
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 72 QGLHRHPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNP 215
Q +HPC Y+ T + P RP L PP H + NP
Sbjct: 482 QSQRQHPCLTSYYVYTTSAEPPKAIRPEASL-YAPPTHTHNALVPANP 528
>AE014297-3264|AAF56090.3| 608|Drosophila melanogaster CG33193-PA
protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 72 QGLHRHPCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNP 215
Q +HPC Y+ T + P RP L PP H + NP
Sbjct: 483 QSQRQHPCLTSYYVYTTSAEPPKAIRPEASL-YAPPTHTHNALVPANP 529
>AY565957-1|AAS74967.1| 288|Drosophila melanogaster 5-HT2 protein.
Length = 288
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 73 RVCTGTRAHAARTYAPARSSARQSTAPAAACHARRPSTSA 192
R TGT AH++ ++ A S++PA++CH+ S S+
Sbjct: 236 RXTTGT-AHSSFRFSGAGILRHSSSSPASSCHSTSTSRSS 274
>AY118418-1|AAM48447.1| 116|Drosophila melanogaster RE70695p
protein.
Length = 116
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 76 VCTGTRAHAARTY--APARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGT 237
VC GT H ++ +P + + ++ AACH R+ A T+ +R+ R T
Sbjct: 61 VCKGTETHQFLSWKISPKQQDSARTENLFAACHLRKLCVLAFTTTEISRAFRSGPT 116
>AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-PA
protein.
Length = 706
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 96 PCRPYLRTRTVLCPPIYRPRCR 161
P +P RT+TV PPI+ P R
Sbjct: 402 PSKPLTRTKTVKMPPIWVPNSR 423
>AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-PB,
isoform B protein.
Length = 1656
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 105 PYLRTRTVLCPPIYRPRCRLSRTPPLHLSPYITQCNPLSS---RLWYTPLLRPFCK 263
P L TRT+ P+ + R + T S + QC PL S RL L P C+
Sbjct: 607 PRLITRTLPAEPVQQTAARYNMTTCCQASGLLPQCAPLCSYNIRLSDIERLGPACR 662
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,732
Number of Sequences: 53049
Number of extensions: 320777
Number of successful extensions: 2506
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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