Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309A10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens ...    37   0.037
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       37   0.037
U77546-1|AAB36755.1|  120|Homo sapiens immunoglobulin variable r...    30   5.7  
U77545-1|AAB36754.1|  120|Homo sapiens immunoglobulin variable r...    30   5.7  

>AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
           Rattus norvegicus f-spondin mRNA. ).
          Length = 807

 Score = 37.1 bits (82), Expect = 0.037
 Identities = 25/96 (26%), Positives = 41/96 (42%)
 Frame = +1

Query: 208 GSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAGFKIILDPLNPDTRRA 387
           G++  G   + L V G+ + Y P   Y VTL  +        F GF +I    N +  + 
Sbjct: 52  GTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPP----SYFRGFTLIALRENREGDKE 107

Query: 388 PSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEV 495
               G FQ+  +  T+F   C  +V E+    +T +
Sbjct: 108 EDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRI 143


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 37.1 bits (82), Expect = 0.037
 Identities = 25/96 (26%), Positives = 41/96 (42%)
 Frame = +1

Query: 208 GSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAGFKIILDPLNPDTRRA 387
           G++  G   + L V G+ + Y P   Y VTL  +        F GF +I    N +  + 
Sbjct: 52  GTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPP----SYFRGFTLIALRENREGDKE 107

Query: 388 PSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEV 495
               G FQ+  +  T+F   C  +V E+    +T +
Sbjct: 108 EDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRI 143


>U77546-1|AAB36755.1|  120|Homo sapiens immunoglobulin variable
           region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 352 ILDPLNPDTRRAPSKQGQFQLFAD 423
           I++P N DTR +PS QGQ  + AD
Sbjct: 50  IINPRNSDTRYSPSFQGQVTISAD 73


>U77545-1|AAB36754.1|  120|Homo sapiens immunoglobulin variable
           region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 352 ILDPLNPDTRRAPSKQGQFQLFAD 423
           I++P N DTR +PS QGQ  + AD
Sbjct: 50  IINPRNSDTRYSPSFQGQVTISAD 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,139,189
Number of Sequences: 237096
Number of extensions: 1326960
Number of successful extensions: 4208
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4205
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)