BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS309A08f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83840-1|CAI17917.1| 168|Homo sapiens protein ( Human DNA seque... 50 7e-06 CR456458-1|CAG30344.1| 168|Homo sapiens dJ347H13.4 protein. 50 7e-06 BC112179-1|AAI12180.1| 168|Homo sapiens hypothetical protein LO... 50 7e-06 BC093956-1|AAH93956.1| 168|Homo sapiens DNA segment, Chr 15, Wa... 50 7e-06 AL023553-1|CAI20277.1| 168|Homo sapiens protein ( Human DNA seq... 50 7e-06 AJ389177-1|CAB51717.1| 133|Homo sapiens immunoglobulin heavy ch... 29 7.5 >Z83840-1|CAI17917.1| 168|Homo sapiens protein ( Human DNA sequence from clone CTA-216E10 on chromosome 22. ). Length = 168 Score = 49.6 bits (113), Expect = 7e-06 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +2 Query: 419 GRDVEGIWHTAIVAYDREFFYGANGITSCTP 511 G+ +EGIWHT+IV + EFF+G+ GI+SC P Sbjct: 30 GKQLEGIWHTSIVVHKDEFFFGSGGISSCPP 60 >CR456458-1|CAG30344.1| 168|Homo sapiens dJ347H13.4 protein. Length = 168 Score = 49.6 bits (113), Expect = 7e-06 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +2 Query: 419 GRDVEGIWHTAIVAYDREFFYGANGITSCTP 511 G+ +EGIWHT+IV + EFF+G+ GI+SC P Sbjct: 30 GKQLEGIWHTSIVVHKDEFFFGSGGISSCPP 60 >BC112179-1|AAI12180.1| 168|Homo sapiens hypothetical protein LOC27351 protein. Length = 168 Score = 49.6 bits (113), Expect = 7e-06 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +2 Query: 419 GRDVEGIWHTAIVAYDREFFYGANGITSCTP 511 G+ +EGIWHT+IV + EFF+G+ GI+SC P Sbjct: 30 GKQLEGIWHTSIVVHKDEFFFGSGGISSCPP 60 >BC093956-1|AAH93956.1| 168|Homo sapiens DNA segment, Chr 15, Wayne State University 75, expressed protein. Length = 168 Score = 49.6 bits (113), Expect = 7e-06 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +2 Query: 419 GRDVEGIWHTAIVAYDREFFYGANGITSCTP 511 G+ +EGIWHT+IV + EFF+G+ GI+SC P Sbjct: 30 GKQLEGIWHTSIVVHKDEFFFGSGGISSCPP 60 >AL023553-1|CAI20277.1| 168|Homo sapiens protein ( Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene Statin S). Length = 168 Score = 49.6 bits (113), Expect = 7e-06 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +2 Query: 419 GRDVEGIWHTAIVAYDREFFYGANGITSCTP 511 G+ +EGIWHT+IV + EFF+G+ GI+SC P Sbjct: 30 GKQLEGIWHTSIVVHKDEFFFGSGGISSCPP 60 >AJ389177-1|CAB51717.1| 133|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 133 Score = 29.5 bits (63), Expect = 7.5 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 Query: 341 YNSDPTGEPSLRASFVYQSDYRLATISSSSAS 246 Y+ D TG P+ R F Y L T+SS SAS Sbjct: 101 YHYDSTGYPNRRYYFDYWGQGTLVTVSSGSAS 132 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 78,949,029 Number of Sequences: 237096 Number of extensions: 1628387 Number of successful extensions: 3498 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3381 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3498 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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