Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309A07f
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    31   0.47 
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    31   0.47 
Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical p...    29   1.9  
AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate o...    29   1.9  
AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical ...    27   5.8  
AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5 prot...    27   5.8  

>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 31.1 bits (67), Expect = 0.47
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 193 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 342
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 81  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 131


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 31.1 bits (67), Expect = 0.47
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 193 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 342
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 95  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 145


>Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical
           protein T22C1.8 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 109 GTVEDDESADPRLAKDPAYEMFDKVDK 189
           G  +DD+ A  RLAK P+ E  D+ DK
Sbjct: 9   GNSQDDQQASRRLAKKPSDEKVDEKDK 35


>U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical
           protein F18E3.7a protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -3

Query: 210 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 79
           K++ LE+ + F +  V  +   +  G  +I+NC+GL+  K+  D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194


>AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate
           oxidase protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -3

Query: 210 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 79
           K++ LE+ + F +  V  +   +  G  +I+NC+GL+  K+  D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194


>AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical
           protein Y6B3B.9 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 402 DETVFALDPQWFRELDLLLPALNDFSLIF 316
           D  VF+ D +W++ LD LLP   +FS  F
Sbjct: 331 DADVFS-DEEWYKVLDHLLPVAKNFSTEF 358


>AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical
           protein Y66A7A.5 protein.
          Length = 685

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 103 KTGTVEDDESADPRLAKDPAYEM 171
           K+  +EDD+   PRLAK P  EM
Sbjct: 647 KSPKLEDDDDPPPRLAKMPRLEM 669


>AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5
           protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 103 KTGTVEDDESADPRLAKDPAYEM 171
           K+  +EDD+   PRLAK P  EM
Sbjct: 700 KSPKLEDDDDPPPRLAKMPRLEM 722


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.132    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,578,491
Number of Sequences: 27780
Number of extensions: 201851
Number of successful extensions: 488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)