Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309A06f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-P... 347 4e-96
AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-P... 347 4e-96
U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog pro... 347 7e-96
AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p pro... 347 7e-96
BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p pro... 237 5e-63
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 5.1
DQ062760-1|AAY56633.1| 200|Drosophila melanogaster mitochondria... 28 8.8
AY095194-1|AAM12287.1| 200|Drosophila melanogaster RE01527p pro... 28 8.8
AE014297-2304|AAF55385.1| 200|Drosophila melanogaster CG5184-PA... 28 8.8
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA... 28 8.8
>AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-PA,
isoform A protein.
Length = 231
Score = 347 bits (854), Expect = 4e-96
Identities = 158/165 (95%), Positives = 163/165 (98%)
Frame = +3
Query: 27 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 206
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71
Query: 207 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 386
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131
Query: 387 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 521
FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQ
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQ 176
>AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-PB,
isoform B protein.
Length = 237
Score = 347 bits (854), Expect = 4e-96
Identities = 158/165 (95%), Positives = 163/165 (98%)
Frame = +3
Query: 27 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 206
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77
Query: 207 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 386
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137
Query: 387 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 521
FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQ
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQ 182
>U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog
protein.
Length = 218
Score = 347 bits (852), Expect = 7e-96
Identities = 158/163 (96%), Positives = 162/163 (99%)
Frame = +3
Query: 33 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 212
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 213 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 392
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 393 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 521
KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQ
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQ 163
>AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p
protein.
Length = 218
Score = 347 bits (852), Expect = 7e-96
Identities = 158/163 (96%), Positives = 162/163 (99%)
Frame = +3
Query: 33 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 212
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 213 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 392
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 393 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 521
KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQ
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQ 163
>BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p
protein.
Length = 197
Score = 237 bits (581), Expect = 5e-63
Identities = 121/165 (73%), Positives = 129/165 (78%)
Frame = +3
Query: 27 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 206
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64
Query: 207 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 386
QLSSEALEAGRICCNK ++ G D+ MR GA
Sbjct: 65 QLSSEALEAGRICCNK-MLSCAGADRLQTGMR--------------------------GA 97
Query: 387 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQ 521
FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQ
Sbjct: 98 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQ 142
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 231 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 91
PPK S+ +RTP+ + S+ R SWD V+ R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590
>DQ062760-1|AAY56633.1| 200|Drosophila melanogaster mitochondrial
ribosomal proteinS11 protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 234 LPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPD-RTSISDTVYF---C 67
+P PL ++ I + R E R+ L+S P + G+ + D T I+ F
Sbjct: 16 MPAVPLQTS-RIHTSACWRKAEDRKEMLASLPAKDEGTVGEKTVDIDTLINRKAKFFPDA 74
Query: 66 STGSISLAGAPW*SLPSCRIR 4
ST + G P+ LP C IR
Sbjct: 75 STANTLFNGIPFNELPICNIR 95
>AY095194-1|AAM12287.1| 200|Drosophila melanogaster RE01527p
protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 234 LPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPD-RTSISDTVYF---C 67
+P PL ++ I + R E R+ L+S P + G+ + D T I+ F
Sbjct: 16 MPAVPLQTS-RIHTSACWRKAEDRKEMLASLPAKDEGTVGEKTVDIDTLINRKAKFFPDA 74
Query: 66 STGSISLAGAPW*SLPSCRIR 4
ST + G P+ LP C IR
Sbjct: 75 STANTLFNGIPFNELPICNIR 95
>AE014297-2304|AAF55385.1| 200|Drosophila melanogaster CG5184-PA,
isoform A protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 234 LPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPD-RTSISDTVYF---C 67
+P PL ++ I + R E R+ L+S P + G+ + D T I+ F
Sbjct: 16 MPAVPLQTS-RIHTSACWRKAEDRKEMLASLPAKDEGTVGEKTVDIDTLINRKAKFFPDA 74
Query: 66 STGSISLAGAPW*SLPSCRIR 4
ST + G P+ LP C IR
Sbjct: 75 STANTLFNGIPFNELPICNIR 95
>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
protein.
Length = 1995
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 189 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 67
P+ R V S S+S S P G D PD+ SI++ Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,633,792
Number of Sequences: 53049
Number of extensions: 633063
Number of successful extensions: 1965
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -