Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309A05f
         (387 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F96 Cluster: Ymf77; n=1; Tetrahymena malaccensis|Rep...    32   3.3  
UniRef50_A0DF30 Cluster: Chromosome undetermined scaffold_483, w...    32   4.4  
UniRef50_UPI00006CBDAB Cluster: hypothetical protein TTHERM_0031...    31   7.7  

>UniRef50_Q09F96 Cluster: Ymf77; n=1; Tetrahymena malaccensis|Rep:
           Ymf77 - Tetrahymena malaccensis
          Length = 1294

 Score = 32.3 bits (70), Expect = 3.3
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 39  NYLITELIXISNKINYLNHYTG---TKYL*LIRNXTLIHNYFLYN 164
           N ++  L  I+NKINY+N  +    + Y+ L+ N   I+NY +YN
Sbjct: 345 NIIMYNLFNINNKINYINTISNKLKSIYIVLLININNINNYNVYN 389


>UniRef50_A0DF30 Cluster: Chromosome undetermined scaffold_483,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_483,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 246

 Score = 31.9 bits (69), Expect = 4.4
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 33  IMNYLITELIXISNKINYLNHYTGTKYL*LI--RNXTLIHNYFLY 161
           I+  L+  +  ISN ++YLNHY+   ++  I   N    +NY++Y
Sbjct: 129 IIIILLFNICVISNNMSYLNHYSFRNFVKQIDENNQNYFNNYYIY 173


>UniRef50_UPI00006CBDAB Cluster: hypothetical protein
           TTHERM_00316170; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00316170 - Tetrahymena
           thermophila SB210
          Length = 999

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 54  ELIXISNKINYLNHYTGTKYL*LIRNXTLI-HNYFLYNRSDLR 179
           +L+ + +K+ YLNH    K+L  + N  LI +N+   N+ DL+
Sbjct: 737 KLLYVQSKLQYLNHKVQCKFLNQLTNKKLILNNFNSENKQDLQ 779


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,418,439
Number of Sequences: 1657284
Number of extensions: 4469963
Number of successful extensions: 6711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6709
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)