Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309A05f
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010076-1|AAQ22545.1|  824|Drosophila melanogaster LD10379p pro...    29   1.6  
BT003438-1|AAO39441.1| 1309|Drosophila melanogaster SD01504p pro...    29   1.6  
AE014297-2925|AAF55845.2| 1330|Drosophila melanogaster CG3421-PA...    29   1.6  

>BT010076-1|AAQ22545.1|  824|Drosophila melanogaster LD10379p
           protein.
          Length = 824

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 193 LFETNTYSYYFYPFLTRSLEEHERLRFRXVPLSRL 297
           LF+TNT  +Y+Y   T+    H   +   +PL++L
Sbjct: 52  LFDTNTQRFYYYNAATQKTVWHRPSKCDIIPLAKL 86


>BT003438-1|AAO39441.1| 1309|Drosophila melanogaster SD01504p
           protein.
          Length = 1309

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 193 LFETNTYSYYFYPFLTRSLEEHERLRFRXVPLSRL 297
           LF+TNT  +Y+Y   T+    H   +   +PL++L
Sbjct: 31  LFDTNTQRFYYYNAATQKTVWHRPSKCDIIPLAKL 65


>AE014297-2925|AAF55845.2| 1330|Drosophila melanogaster CG3421-PA
           protein.
          Length = 1330

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 193 LFETNTYSYYFYPFLTRSLEEHERLRFRXVPLSRL 297
           LF+TNT  +Y+Y   T+    H   +   +PL++L
Sbjct: 52  LFDTNTQRFYYYNAATQKTVWHRPSKCDIIPLAKL 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,665,032
Number of Sequences: 53049
Number of extensions: 193648
Number of successful extensions: 329
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)