Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309A04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase ... 119 5e-27
BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase ... 119 5e-27
Z82244-2|CAB05110.1| 733|Homo sapiens MCM5 minichromosome maint... 31 2.4
X74795-1|CAA52802.2| 734|Homo sapiens P1 Cdc46 protein. 31 2.4
D83986-1|BAA12176.1| 733|Homo sapiens huMCM5 protein. 31 2.4
CR456517-1|CAG30403.1| 734|Homo sapiens MCM5 protein. 31 2.4
BC003656-1|AAH03656.1| 734|Homo sapiens minichromosome maintena... 31 2.4
BC000142-1|AAH00142.1| 734|Homo sapiens minichromosome maintena... 31 2.4
AY212028-1|AAO21127.1| 734|Homo sapiens MCM5 minichromosome mai... 31 2.4
AK223323-1|BAD97043.1| 734|Homo sapiens minichromosome maintena... 31 2.4
BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein. 31 3.2
AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein. 31 3.2
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein. 31 3.2
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein. 31 3.2
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ... 31 3.2
AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and sc... 31 3.2
AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein. 31 3.2
>BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 119 bits (287), Expect = 5e-27
Identities = 52/103 (50%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +1
Query: 214 YQSKVLRCEPTK-EPIVDYGKTSLFEGFQITLENTILFPAGGGQPHDIGWLNDVEVLQVL 390
+ + V+ C P + + GK + GFQ+ LE+T+LFP GGGQP D G +ND+ VL+V
Sbjct: 127 FTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDISVLRVT 186
Query: 391 RKGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
R+G++A HFT+ P+D G +V +V+W RRFDHMQQHSGQHL++
Sbjct: 187 RRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLIT 229
>BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 119 bits (287), Expect = 5e-27
Identities = 52/103 (50%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +1
Query: 214 YQSKVLRCEPTK-EPIVDYGKTSLFEGFQITLENTILFPAGGGQPHDIGWLNDVEVLQVL 390
+ + V+ C P + + GK + GFQ+ LE+T+LFP GGGQP D G +ND+ VL+V
Sbjct: 127 FTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDISVLRVT 186
Query: 391 RKGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
R+G++A HFT+ P+D G +V +V+W RRFDHMQQHSGQHL++
Sbjct: 187 RRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLIT 229
>Z82244-2|CAB05110.1| 733|Homo sapiens MCM5 minichromosome
maintenance deficient 5, cellr) protein.
Length = 733
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>X74795-1|CAA52802.2| 734|Homo sapiens P1 Cdc46 protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>D83986-1|BAA12176.1| 733|Homo sapiens huMCM5 protein.
Length = 733
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>CR456517-1|CAG30403.1| 734|Homo sapiens MCM5 protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>BC003656-1|AAH03656.1| 734|Homo sapiens minichromosome maintenance
complex component 5 protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>BC000142-1|AAH00142.1| 734|Homo sapiens minichromosome maintenance
complex component 5 protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>AY212028-1|AAO21127.1| 734|Homo sapiens MCM5 minichromosome
maintenance deficient 5, cell division cycle 46 (S.
cerevis protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>AK223323-1|BAD97043.1| 734|Homo sapiens minichromosome maintenance
deficient protein 5 variant protein.
Length = 734
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 432 YWLSCEVECLVTFPENLQHFNIIQPADVMRLSTSCWKE 319
YW+ E+E L +F E+L + QPA+ ++L KE
Sbjct: 68 YWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKE 105
>BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.
Length = 1228
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 237 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 288
>AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.
Length = 1247
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 256 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 307
>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 256 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 307
>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 256 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 307
>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
ATROPHIN-1. ).
Length = 1064
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 73 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 124
>AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and
scaffold protein protein.
Length = 1247
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 256 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 307
>AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.
Length = 1319
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 169 IKINHQIKLLRFLRKYQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILF 324
+K KL+ R+ + K++R E K+P + G+ +FE + E + L+
Sbjct: 328 VKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVLDERSALY 379
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,082,598
Number of Sequences: 237096
Number of extensions: 1619420
Number of successful extensions: 6743
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6741
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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